data_3MYZ
#
_model_server_result.job_id            -gZ5TD0DBZaLflJDFPTX9w 
_model_server_result.datetime_utc      '2024-11-19 10:38:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3myz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":101}' 
#
_entry.id    3MYZ 
#
_exptl.entry_id    3MYZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              283.411 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.42 
_cell.angle_gamma         90 
_cell.entry_id            3MYZ 
_cell.length_a            48.349 
_cell.length_b            28.467 
_cell.length_c            74.983 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3MYZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,K 1 1 
B,I,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 26 A CYS 25 1_555 A SG CYS 81 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
metalc ? metalc1 A NE2 HIS 52 A HIS 51 1_555 C HG HG . A HG 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? 
#
_chem_comp.formula           'C17 H19 N2 S 1' 
_chem_comp.formula_weight    283.411 
_chem_comp.id                TFX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'Thioflavin T' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C8 TFX doub 296 n y 
N1 C9 TFX sing 297 n y 
N1 C17 TFX sing 298 n n 
S1 C8 TFX sing 299 n y 
S1 C10 TFX sing 300 n y 
C2 N2 TFX sing 301 n n 
C2 C3 TFX doub 302 n y 
C2 C7 TFX sing 303 n y 
N2 C15 TFX sing 304 n n 
N2 C16 TFX sing 305 n n 
C3 C4 TFX sing 306 n y 
C4 C5 TFX doub 307 n y 
C5 C6 TFX sing 308 n y 
C5 C8 TFX sing 309 n y 
C6 C7 TFX doub 310 n y 
C9 C10 TFX doub 311 n y 
C9 C14 TFX sing 312 n y 
C10 C11 TFX sing 313 n y 
C11 C12 TFX doub 314 n y 
C12 C13 TFX sing 315 n y 
C12 C18 TFX sing 316 n n 
C13 C14 TFX doub 317 n y 
C3 H3 TFX sing 318 n n 
C4 H4 TFX sing 319 n n 
C6 H6 TFX sing 320 n n 
C7 H7 TFX sing 321 n n 
C11 H11 TFX sing 322 n n 
C13 H13 TFX sing 323 n n 
C14 H14 TFX sing 324 n n 
C15 H15 TFX sing 325 n n 
C15 H15A TFX sing 326 n n 
C15 H15B TFX sing 327 n n 
C16 H16 TFX sing 328 n n 
C16 H16A TFX sing 329 n n 
C16 H16B TFX sing 330 n n 
C17 H17 TFX sing 331 n n 
C17 H17A TFX sing 332 n n 
C17 H17B TFX sing 333 n n 
C18 H18 TFX sing 334 n n 
C18 H18A TFX sing 335 n n 
C18 H18B TFX sing 336 n n 
#
_atom_sites.entry_id                     3MYZ 
_atom_sites.fract_transf_matrix[1][1]    0.020683 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000513 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.035128 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01334 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HG A 1 100 100 HG HG . 
D 3 TFX A 1 101 101 TFX TFX . 
E 3 TFX A 1 102 102 TFX TFX . 
F 4 TLA A 1 501 501 TLA TLA . 
G 5 ACT A 1 1428 1428 ACT ACT . 
H 5 ACT A 1 103 103 ACT ACT . 
I 3 TFX B 1 101 101 TFX TFX . 
J 5 ACT B 1 1428 1428 ACT ACT . 
K 6 HOH A 1 104 104 HOH HOH . 
K 6 HOH A 2 105 105 HOH HOH . 
K 6 HOH A 3 106 106 HOH HOH . 
K 6 HOH A 4 107 107 HOH HOH . 
K 6 HOH A 5 108 108 HOH HOH . 
K 6 HOH A 6 109 109 HOH HOH . 
K 6 HOH A 7 110 110 HOH HOH . 
K 6 HOH A 8 111 111 HOH HOH . 
K 6 HOH A 9 112 112 HOH HOH . 
K 6 HOH A 10 113 113 HOH HOH . 
K 6 HOH A 11 114 114 HOH HOH . 
K 6 HOH A 12 115 115 HOH HOH . 
K 6 HOH A 13 116 116 HOH HOH . 
K 6 HOH A 14 117 117 HOH HOH . 
K 6 HOH A 15 118 118 HOH HOH . 
K 6 HOH A 16 119 119 HOH HOH . 
K 6 HOH A 17 120 120 HOH HOH . 
K 6 HOH A 18 121 121 HOH HOH . 
K 6 HOH A 19 122 122 HOH HOH . 
K 6 HOH A 20 123 123 HOH HOH . 
K 6 HOH A 21 124 124 HOH HOH . 
K 6 HOH A 22 125 125 HOH HOH . 
K 6 HOH A 23 126 126 HOH HOH . 
K 6 HOH A 24 127 127 HOH HOH . 
K 6 HOH A 25 128 128 HOH HOH . 
K 6 HOH A 26 129 129 HOH HOH . 
K 6 HOH A 27 130 130 HOH HOH . 
K 6 HOH A 28 131 131 HOH HOH . 
K 6 HOH A 29 132 132 HOH HOH . 
K 6 HOH A 30 133 133 HOH HOH . 
K 6 HOH A 31 134 134 HOH HOH . 
K 6 HOH A 32 135 135 HOH HOH . 
K 6 HOH A 33 136 136 HOH HOH . 
K 6 HOH A 34 137 137 HOH HOH . 
K 6 HOH A 35 138 138 HOH HOH . 
K 6 HOH A 36 139 139 HOH HOH . 
K 6 HOH A 37 140 140 HOH HOH . 
K 6 HOH A 38 141 141 HOH HOH . 
K 6 HOH A 39 142 142 HOH HOH . 
K 6 HOH A 40 143 143 HOH HOH . 
K 6 HOH A 41 144 144 HOH HOH . 
K 6 HOH A 42 145 145 HOH HOH . 
K 6 HOH A 43 146 146 HOH HOH . 
K 6 HOH A 44 147 147 HOH HOH . 
K 6 HOH A 45 148 148 HOH HOH . 
K 6 HOH A 46 149 149 HOH HOH . 
K 6 HOH A 47 150 150 HOH HOH . 
K 6 HOH A 48 151 151 HOH HOH . 
K 6 HOH A 49 152 152 HOH HOH . 
K 6 HOH A 50 153 153 HOH HOH . 
K 6 HOH A 51 154 154 HOH HOH . 
K 6 HOH A 52 155 155 HOH HOH . 
K 6 HOH A 53 156 156 HOH HOH . 
K 6 HOH A 54 157 157 HOH HOH . 
K 6 HOH A 55 158 158 HOH HOH . 
K 6 HOH A 56 159 159 HOH HOH . 
K 6 HOH A 57 160 160 HOH HOH . 
K 6 HOH A 58 161 161 HOH HOH . 
K 6 HOH A 59 162 162 HOH HOH . 
K 6 HOH A 60 163 163 HOH HOH . 
K 6 HOH A 61 164 164 HOH HOH . 
K 6 HOH A 62 165 165 HOH HOH . 
K 6 HOH A 63 166 166 HOH HOH . 
K 6 HOH A 64 167 167 HOH HOH . 
K 6 HOH A 65 168 168 HOH HOH . 
K 6 HOH A 66 169 169 HOH HOH . 
K 6 HOH A 67 170 170 HOH HOH . 
K 6 HOH A 68 171 171 HOH HOH . 
K 6 HOH A 69 172 172 HOH HOH . 
K 6 HOH A 70 173 173 HOH HOH . 
K 6 HOH A 71 174 174 HOH HOH . 
K 6 HOH A 72 175 175 HOH HOH . 
L 6 HOH B 1 100 100 HOH HOH . 
L 6 HOH B 2 102 102 HOH HOH . 
L 6 HOH B 3 103 103 HOH HOH . 
L 6 HOH B 4 104 104 HOH HOH . 
L 6 HOH B 5 105 105 HOH HOH . 
L 6 HOH B 6 106 106 HOH HOH . 
L 6 HOH B 7 107 107 HOH HOH . 
L 6 HOH B 8 108 108 HOH HOH . 
L 6 HOH B 9 109 109 HOH HOH . 
L 6 HOH B 10 110 110 HOH HOH . 
L 6 HOH B 11 111 111 HOH HOH . 
L 6 HOH B 12 112 112 HOH HOH . 
L 6 HOH B 13 113 113 HOH HOH . 
L 6 HOH B 14 114 114 HOH HOH . 
L 6 HOH B 15 115 115 HOH HOH . 
L 6 HOH B 16 116 116 HOH HOH . 
L 6 HOH B 17 117 117 HOH HOH . 
L 6 HOH B 18 118 118 HOH HOH . 
L 6 HOH B 19 119 119 HOH HOH . 
L 6 HOH B 20 120 120 HOH HOH . 
L 6 HOH B 21 121 121 HOH HOH . 
L 6 HOH B 22 122 122 HOH HOH . 
L 6 HOH B 23 123 123 HOH HOH . 
L 6 HOH B 24 124 124 HOH HOH . 
L 6 HOH B 25 125 125 HOH HOH . 
L 6 HOH B 26 126 126 HOH HOH . 
L 6 HOH B 27 127 127 HOH HOH . 
L 6 HOH B 28 128 128 HOH HOH . 
L 6 HOH B 29 129 129 HOH HOH . 
L 6 HOH B 30 130 130 HOH HOH . 
L 6 HOH B 31 131 131 HOH HOH . 
L 6 HOH B 32 132 132 HOH HOH . 
L 6 HOH B 33 133 133 HOH HOH . 
L 6 HOH B 34 134 134 HOH HOH . 
L 6 HOH B 35 135 135 HOH HOH . 
L 6 HOH B 36 136 136 HOH HOH . 
L 6 HOH B 37 137 137 HOH HOH . 
L 6 HOH B 38 138 138 HOH HOH . 
L 6 HOH B 39 139 139 HOH HOH . 
L 6 HOH B 40 140 140 HOH HOH . 
L 6 HOH B 41 141 141 HOH HOH . 
L 6 HOH B 42 142 142 HOH HOH . 
L 6 HOH B 43 143 143 HOH HOH . 
L 6 HOH B 44 144 144 HOH HOH . 
L 6 HOH B 45 145 145 HOH HOH . 
L 6 HOH B 46 146 146 HOH HOH . 
L 6 HOH B 47 147 147 HOH HOH . 
L 6 HOH B 48 148 148 HOH HOH . 
L 6 HOH B 49 149 149 HOH HOH . 
L 6 HOH B 50 150 150 HOH HOH . 
L 6 HOH B 51 151 151 HOH HOH . 
L 6 HOH B 52 152 152 HOH HOH . 
L 6 HOH B 53 153 153 HOH HOH . 
L 6 HOH B 54 154 154 HOH HOH . 
L 6 HOH B 55 155 155 HOH HOH . 
L 6 HOH B 56 156 156 HOH HOH . 
L 6 HOH B 57 157 157 HOH HOH . 
L 6 HOH B 58 158 158 HOH HOH . 
L 6 HOH B 59 159 159 HOH HOH . 
L 6 HOH B 60 160 160 HOH HOH . 
L 6 HOH B 61 161 161 HOH HOH . 
L 6 HOH B 62 162 162 HOH HOH . 
L 6 HOH B 63 163 163 HOH HOH . 
L 6 HOH B 64 164 164 HOH HOH . 
L 6 HOH B 65 165 165 HOH HOH . 
L 6 HOH B 66 166 166 HOH HOH . 
L 6 HOH B 67 167 167 HOH HOH . 
L 6 HOH B 68 168 168 HOH HOH . 
L 6 HOH B 69 169 169 HOH HOH . 
L 6 HOH B 70 170 170 HOH HOH . 
L 6 HOH B 71 171 171 HOH HOH . 
L 6 HOH B 72 172 172 HOH HOH . 
L 6 HOH B 73 173 173 HOH HOH . 
L 6 HOH B 74 174 174 HOH HOH . 
L 6 HOH B 75 175 175 HOH HOH . 
L 6 HOH B 76 176 176 HOH HOH . 
L 6 HOH B 77 177 177 HOH HOH . 
L 6 HOH B 78 178 178 HOH HOH . 
L 6 HOH B 79 179 179 HOH HOH . 
L 6 HOH B 80 180 180 HOH HOH . 
L 6 HOH B 81 181 181 HOH HOH . 
L 6 HOH B 82 182 182 HOH HOH . 
L 6 HOH B 83 183 183 HOH HOH . 
L 6 HOH B 84 184 184 HOH HOH . 
L 6 HOH B 85 185 185 HOH HOH . 
L 6 HOH B 86 186 186 HOH HOH . 
L 6 HOH B 87 187 187 HOH HOH . 
L 6 HOH B 88 188 188 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 TFX . . . I 3 9.515 1.961 18.16 1 31.76 ? N1 TFX 101 B 1 
HETATM 2 S S1 TFX . . . I 3 11.092 -0.236 17.995 1 33 ? S1 TFX 101 B 1 
HETATM 3 C C2 TFX . . . I 3 9.432 0.299 12.9 1 30.53 ? C2 TFX 101 B 1 
HETATM 4 N N2 TFX . . . I 3 9.207 0.155 11.474 1 34.1 ? N2 TFX 101 B 1 
HETATM 5 C C3 TFX . . . I 3 9.706 -0.848 13.724 1 29.32 ? C3 TFX 101 B 1 
HETATM 6 C C4 TFX . . . I 3 9.927 -0.691 15.128 1 31.67 ? C4 TFX 101 B 1 
HETATM 7 C C5 TFX . . . I 3 9.89 0.709 15.708 1 31.05 ? C5 TFX 101 B 1 
HETATM 8 C C6 TFX . . . I 3 9.599 1.907 14.898 1 30.29 ? C6 TFX 101 B 1 
HETATM 9 C C7 TFX . . . I 3 9.395 1.759 13.531 1 28.78 ? C7 TFX 101 B 1 
HETATM 10 C C8 TFX . . . I 3 10.051 0.95 17.181 1 31.45 ? C8 TFX 101 B 1 
HETATM 11 C C9 TFX . . . I 3 10.059 1.645 19.579 1 34.07 ? C9 TFX 101 B 1 
HETATM 12 C C10 TFX . . . I 3 10.975 0.39 19.562 1 32.66 ? C10 TFX 101 B 1 
HETATM 13 C C11 TFX . . . I 3 11.528 0.002 20.794 1 35.24 ? C11 TFX 101 B 1 
HETATM 14 C C12 TFX . . . I 3 11.241 0.775 22.066 1 35.18 ? C12 TFX 101 B 1 
HETATM 15 C C13 TFX . . . I 3 10.381 1.939 22.029 1 35.41 ? C13 TFX 101 B 1 
HETATM 16 C C14 TFX . . . I 3 9.776 2.377 20.747 1 33.29 ? C14 TFX 101 B 1 
HETATM 17 C C15 TFX . . . I 3 9.254 -1.157 10.852 1 37.87 ? C15 TFX 101 B 1 
HETATM 18 C C16 TFX . . . I 3 8.935 1.349 10.706 1 34.82 ? C16 TFX 101 B 1 
HETATM 19 C C17 TFX . . . I 3 8.643 3.043 17.819 1 32.91 ? C17 TFX 101 B 1 
HETATM 20 C C18 TFX . . . I 3 11.807 0.393 23.373 1 37.65 ? C18 TFX 101 B 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           445 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           20 
#