data_3MZS
#
_model_server_result.job_id            Kh5_cy1dZs6Rln5LS9U9uw 
_model_server_result.datetime_utc      '2024-10-19 09:40:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3mzs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":501}' 
#
_entry.id    3MZS 
#
_exptl.entry_id    3MZS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              402.653 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (3alpha,8alpha,22R)-cholest-5-ene-3,22-diol 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          89.96 
_cell.angle_gamma         90 
_cell.entry_id            3MZS 
_cell.length_a            109.45 
_cell.length_b            94.63 
_cell.length_c            113.5 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3MZS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,Q 1 1 
B,H,I,J,R 2 1 
C,K,L,M,S 3 1 
D,N,O,P,T 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 I N N 
? 3 L N N 
? 3 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 423 A CYS 423 1_555 E FE HEM . A HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? 
metalc ? metalc2 E FE HEM . A HEM 500 1_555 F O2 HC9 . A HC9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? 
metalc ? metalc3 B SG CYS 423 B CYS 423 1_555 H FE HEM . B HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc4 H FE HEM . B HEM 500 1_555 I O2 HC9 . B HC9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? 
metalc ? metalc5 C SG CYS 423 C CYS 423 1_555 K FE HEM . C HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? 
metalc ? metalc6 K FE HEM . C HEM 500 1_555 L O2 HC9 . C HC9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc7 D SG CYS 423 D CYS 423 1_555 N FE HEM . D HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? 
metalc ? metalc8 N FE HEM . D HEM 500 1_555 O O2 HC9 . D HC9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? 
#
_chem_comp.formula           'C27 H46 O2' 
_chem_comp.formula_weight    402.653 
_chem_comp.id                HC9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (3alpha,8alpha,22R)-cholest-5-ene-3,22-diol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 HC9 sing 129 n n 
C1 C10 HC9 sing 130 n n 
O1 C3 HC9 sing 131 n n 
C2 C3 HC9 sing 132 n n 
O2 C22 HC9 sing 133 n n 
C3 C4 HC9 sing 134 n n 
C4 C5 HC9 sing 135 n n 
C5 C6 HC9 doub 136 n n 
C5 C10 HC9 sing 137 n n 
C6 C7 HC9 sing 138 n n 
C7 C8 HC9 sing 139 n n 
C8 C9 HC9 sing 140 n n 
C8 C14 HC9 sing 141 n n 
C9 C10 HC9 sing 142 n n 
C9 C11 HC9 sing 143 n n 
C10 C19 HC9 sing 144 n n 
C11 C12 HC9 sing 145 n n 
C12 C13 HC9 sing 146 n n 
C13 C14 HC9 sing 147 n n 
C13 C17 HC9 sing 148 n n 
C13 C18 HC9 sing 149 n n 
C14 C15 HC9 sing 150 n n 
C15 C16 HC9 sing 151 n n 
C16 C17 HC9 sing 152 n n 
C17 C20 HC9 sing 153 n n 
C20 C21 HC9 sing 154 n n 
C20 C22 HC9 sing 155 n n 
C22 C23 HC9 sing 156 n n 
C23 C24 HC9 sing 157 n n 
C24 C25 HC9 sing 158 n n 
C25 C26 HC9 sing 159 n n 
C25 C27 HC9 sing 160 n n 
C1 H1 HC9 sing 161 n n 
C1 H1A HC9 sing 162 n n 
O1 HO1 HC9 sing 163 n n 
C2 H2 HC9 sing 164 n n 
C2 H2A HC9 sing 165 n n 
O2 HO2 HC9 sing 166 n n 
C3 H3 HC9 sing 167 n n 
C4 H4 HC9 sing 168 n n 
C4 H4A HC9 sing 169 n n 
C6 H6 HC9 sing 170 n n 
C7 H7 HC9 sing 171 n n 
C7 H7A HC9 sing 172 n n 
C8 H8 HC9 sing 173 n n 
C9 H9 HC9 sing 174 n n 
C11 H11 HC9 sing 175 n n 
C11 H11A HC9 sing 176 n n 
C12 H12 HC9 sing 177 n n 
C12 H12A HC9 sing 178 n n 
C14 H14 HC9 sing 179 n n 
C15 H15 HC9 sing 180 n n 
C15 H15A HC9 sing 181 n n 
C16 H16 HC9 sing 182 n n 
C16 H16A HC9 sing 183 n n 
C17 H17 HC9 sing 184 n n 
C18 H18 HC9 sing 185 n n 
C18 H18A HC9 sing 186 n n 
C18 H18B HC9 sing 187 n n 
C19 H19 HC9 sing 188 n n 
C19 H19A HC9 sing 189 n n 
C19 H19B HC9 sing 190 n n 
C20 H20 HC9 sing 191 n n 
C21 H21 HC9 sing 192 n n 
C21 H21A HC9 sing 193 n n 
C21 H21B HC9 sing 194 n n 
C22 H22 HC9 sing 195 n n 
C23 H23 HC9 sing 196 n n 
C23 H23A HC9 sing 197 n n 
C24 H24 HC9 sing 198 n n 
C24 H24A HC9 sing 199 n n 
C25 H25 HC9 sing 200 n n 
C26 H26 HC9 sing 201 n n 
C26 H26A HC9 sing 202 n n 
C26 H26B HC9 sing 203 n n 
C27 H27 HC9 sing 204 n n 
C27 H27A HC9 sing 205 n n 
C27 H27B HC9 sing 206 n n 
#
_atom_sites.entry_id                     3MZS 
_atom_sites.fract_transf_matrix[1][1]    0.009137 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    -0.000006 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010567 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008811 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HEM A 1 500 500 HEM HEM . 
F 3 HC9 A 1 501 501 HC9 HC9 . 
G 4 IPA A 1 502 502 IPA IPA . 
H 2 HEM B 1 500 500 HEM HEM . 
I 3 HC9 B 1 501 501 HC9 HC9 . 
J 4 IPA B 1 502 502 IPA IPA . 
K 2 HEM C 1 500 500 HEM HEM . 
L 3 HC9 C 1 501 501 HC9 HC9 . 
M 4 IPA C 1 502 502 IPA IPA . 
N 2 HEM D 1 500 500 HEM HEM . 
O 3 HC9 D 1 501 501 HC9 HC9 . 
P 4 IPA D 1 502 502 IPA IPA . 
Q 5 HOH A 1 518 518 HOH HOH . 
Q 5 HOH A 2 519 519 HOH HOH . 
Q 5 HOH A 3 520 520 HOH HOH . 
Q 5 HOH A 4 521 521 HOH HOH . 
Q 5 HOH A 5 522 522 HOH HOH . 
Q 5 HOH A 6 523 523 HOH HOH . 
Q 5 HOH A 7 524 524 HOH HOH . 
Q 5 HOH A 8 525 525 HOH HOH . 
Q 5 HOH A 9 526 526 HOH HOH . 
Q 5 HOH A 10 530 530 HOH HOH . 
Q 5 HOH A 11 532 532 HOH HOH . 
Q 5 HOH A 12 533 533 HOH HOH . 
Q 5 HOH A 13 544 544 HOH HOH . 
Q 5 HOH A 14 548 548 HOH HOH . 
Q 5 HOH A 15 549 549 HOH HOH . 
Q 5 HOH A 16 553 553 HOH HOH . 
Q 5 HOH A 17 556 556 HOH HOH . 
Q 5 HOH A 18 557 557 HOH HOH . 
Q 5 HOH A 19 560 560 HOH HOH . 
Q 5 HOH A 20 569 569 HOH HOH . 
Q 5 HOH A 21 571 571 HOH HOH . 
Q 5 HOH A 22 584 584 HOH HOH . 
Q 5 HOH A 23 586 586 HOH HOH . 
Q 5 HOH A 24 591 591 HOH HOH . 
Q 5 HOH A 25 592 592 HOH HOH . 
R 5 HOH B 1 514 514 HOH HOH . 
R 5 HOH B 2 515 515 HOH HOH . 
R 5 HOH B 3 516 516 HOH HOH . 
R 5 HOH B 4 517 517 HOH HOH . 
R 5 HOH B 5 531 531 HOH HOH . 
R 5 HOH B 6 535 535 HOH HOH . 
R 5 HOH B 7 538 538 HOH HOH . 
R 5 HOH B 8 539 539 HOH HOH . 
R 5 HOH B 9 552 552 HOH HOH . 
R 5 HOH B 10 565 565 HOH HOH . 
R 5 HOH B 11 572 572 HOH HOH . 
R 5 HOH B 12 575 575 HOH HOH . 
R 5 HOH B 13 576 576 HOH HOH . 
R 5 HOH B 14 589 589 HOH HOH . 
R 5 HOH B 15 590 590 HOH HOH . 
S 5 HOH C 1 509 509 HOH HOH . 
S 5 HOH C 2 510 510 HOH HOH . 
S 5 HOH C 3 511 511 HOH HOH . 
S 5 HOH C 4 512 512 HOH HOH . 
S 5 HOH C 5 513 513 HOH HOH . 
S 5 HOH C 6 528 528 HOH HOH . 
S 5 HOH C 7 537 537 HOH HOH . 
S 5 HOH C 8 540 540 HOH HOH . 
S 5 HOH C 9 543 543 HOH HOH . 
S 5 HOH C 10 546 546 HOH HOH . 
S 5 HOH C 11 547 547 HOH HOH . 
S 5 HOH C 12 550 550 HOH HOH . 
S 5 HOH C 13 554 554 HOH HOH . 
S 5 HOH C 14 555 555 HOH HOH . 
S 5 HOH C 15 558 558 HOH HOH . 
S 5 HOH C 16 561 561 HOH HOH . 
S 5 HOH C 17 562 562 HOH HOH . 
S 5 HOH C 18 564 564 HOH HOH . 
S 5 HOH C 19 566 566 HOH HOH . 
S 5 HOH C 20 568 568 HOH HOH . 
S 5 HOH C 21 573 573 HOH HOH . 
S 5 HOH C 22 574 574 HOH HOH . 
S 5 HOH C 23 579 579 HOH HOH . 
S 5 HOH C 24 581 581 HOH HOH . 
S 5 HOH C 25 582 582 HOH HOH . 
S 5 HOH C 26 588 588 HOH HOH . 
S 5 HOH C 27 593 593 HOH HOH . 
T 5 HOH D 1 503 503 HOH HOH . 
T 5 HOH D 2 504 504 HOH HOH . 
T 5 HOH D 3 505 505 HOH HOH . 
T 5 HOH D 4 506 506 HOH HOH . 
T 5 HOH D 5 507 507 HOH HOH . 
T 5 HOH D 6 508 508 HOH HOH . 
T 5 HOH D 7 527 527 HOH HOH . 
T 5 HOH D 8 529 529 HOH HOH . 
T 5 HOH D 9 534 534 HOH HOH . 
T 5 HOH D 10 536 536 HOH HOH . 
T 5 HOH D 11 541 541 HOH HOH . 
T 5 HOH D 12 542 542 HOH HOH . 
T 5 HOH D 13 545 545 HOH HOH . 
T 5 HOH D 14 551 551 HOH HOH . 
T 5 HOH D 15 559 559 HOH HOH . 
T 5 HOH D 16 563 563 HOH HOH . 
T 5 HOH D 17 567 567 HOH HOH . 
T 5 HOH D 18 570 570 HOH HOH . 
T 5 HOH D 19 577 577 HOH HOH . 
T 5 HOH D 20 578 578 HOH HOH . 
T 5 HOH D 21 580 580 HOH HOH . 
T 5 HOH D 22 583 583 HOH HOH . 
T 5 HOH D 23 585 585 HOH HOH . 
T 5 HOH D 24 587 587 HOH HOH . 
T 5 HOH D 25 594 594 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 HC9 . . . L 3 44.644 28.312 68.837 1 55.1 ? C1 HC9 501 C 1 
HETATM 2 O O1 HC9 . . . L 3 45.364 29.791 72.228 1 66.97 ? O1 HC9 501 C 1 
HETATM 3 C C2 HC9 . . . L 3 44.378 28.647 70.317 1 60.53 ? C2 HC9 501 C 1 
HETATM 4 O O2 HC9 . . . L 3 47.082 27.843 58.854 1 63.49 ? O2 HC9 501 C 1 
HETATM 5 C C3 HC9 . . . L 3 45.475 29.601 70.795 1 61.42 ? C3 HC9 501 C 1 
HETATM 6 C C4 HC9 . . . L 3 45.199 30.916 70.011 1 59.03 ? C4 HC9 501 C 1 
HETATM 7 C C5 HC9 . . . L 3 45.407 30.718 68.514 1 56.07 ? C5 HC9 501 C 1 
HETATM 8 C C6 HC9 . . . L 3 46.508 31.279 67.986 1 54.8 ? C6 HC9 501 C 1 
HETATM 9 C C7 HC9 . . . L 3 47.245 30.776 66.758 1 52.53 ? C7 HC9 501 C 1 
HETATM 10 C C8 HC9 . . . L 3 46.27 30.023 65.845 1 54.21 ? C8 HC9 501 C 1 
HETATM 11 C C9 HC9 . . . L 3 45.515 28.949 66.643 1 54.17 ? C9 HC9 501 C 1 
HETATM 12 C C10 HC9 . . . L 3 44.748 29.491 67.855 1 55.22 ? C10 HC9 501 C 1 
HETATM 13 C C11 HC9 . . . L 3 44.656 28.08 65.705 1 54.87 ? C11 HC9 501 C 1 
HETATM 14 C C12 HC9 . . . L 3 45.432 27.531 64.478 1 52.83 ? C12 HC9 501 C 1 
HETATM 15 C C13 HC9 . . . L 3 45.99 28.695 63.617 1 51.61 ? C13 HC9 501 C 1 
HETATM 16 C C14 HC9 . . . L 3 46.929 29.45 64.551 1 52.61 ? C14 HC9 501 C 1 
HETATM 17 C C15 HC9 . . . L 3 47.523 30.402 63.509 1 52.85 ? C15 HC9 501 C 1 
HETATM 18 C C16 HC9 . . . L 3 47.904 29.493 62.373 1 50.38 ? C16 HC9 501 C 1 
HETATM 19 C C17 HC9 . . . L 3 46.999 28.275 62.523 1 53.61 ? C17 HC9 501 C 1 
HETATM 20 C C18 HC9 . . . L 3 44.869 29.553 63.084 1 44.99 ? C18 HC9 501 C 1 
HETATM 21 C C19 HC9 . . . L 3 43.351 29.901 67.455 1 52.54 ? C19 HC9 501 C 1 
HETATM 22 C C20 HC9 . . . L 3 46.535 27.736 61.149 1 56.44 ? C20 HC9 501 C 1 
HETATM 23 C C21 HC9 . . . L 3 45.578 26.523 61.147 1 55.35 ? C21 HC9 501 C 1 
HETATM 24 C C22 HC9 . . . L 3 47.663 27.541 60.138 1 57.23 ? C22 HC9 501 C 1 
HETATM 25 C C23 HC9 . . . L 3 48.444 26.218 60.247 1 54.44 ? C23 HC9 501 C 1 
HETATM 26 C C24 HC9 . . . L 3 49.889 26.286 59.763 1 52.58 ? C24 HC9 501 C 1 
HETATM 27 C C25 HC9 . . . L 3 50.867 25.294 60.409 1 54.54 ? C25 HC9 501 C 1 
HETATM 28 C C26 HC9 . . . L 3 50.774 25.263 61.94 1 55.95 ? C26 HC9 501 C 1 
HETATM 29 C C27 HC9 . . . L 3 52.331 25.561 60.041 1 53.25 ? C27 HC9 501 C 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           29 
#