data_3MZT # _model_server_result.job_id 3Q_oAGqBeesbRQIPUETfnw _model_server_result.datetime_utc '2025-06-24 06:58:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mzt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":100}' # _entry.id 3MZT # _exptl.entry_id 3MZT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 283.411 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MZT _cell.length_a 92.891 _cell.length_b 116.592 _cell.length_c 66.317 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MZT _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,P 1 1 B,H,I,Q 2 1 C,J,R 3 1 D,K,L,S 4 1 E,M,T 5 1 F,N,O,U 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 K N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 25 1_555 A SG CYS 81 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf3 C SG CYS 26 C CYS 25 1_555 C SG CYS 81 C CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 D SG CYS 26 D CYS 25 1_555 D SG CYS 81 D CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf5 E SG CYS 26 E CYS 25 1_555 E SG CYS 81 E CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? disulf ? disulf6 F SG CYS 26 F CYS 25 1_555 F SG CYS 81 F CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc1 A N MET 1 A MET 0 1_555 G CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc2 A O ILE 2 A ILE 1 1_555 G CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.859 ? metalc ? metalc3 A N ILE 2 A ILE 1 1_555 G CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc4 A NE2 HIS 32 A HIS 31 1_555 G CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc5 B N MET 1 B MET 0 1_555 I CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc6 B O ILE 2 B ILE 1 1_555 I CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.907 ? metalc ? metalc7 B N ILE 2 B ILE 1 1_555 I CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc8 B NE2 HIS 32 B HIS 31 1_555 I CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc9 C N MET 1 C MET 0 1_555 J CU CU . C CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc10 C O ILE 2 C ILE 1 1_555 J CU CU . C CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? metalc ? metalc11 C N ILE 2 C ILE 1 1_555 J CU CU . C CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc12 C NE2 HIS 32 C HIS 31 1_555 J CU CU . C CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc13 D N MET 1 D MET 0 1_555 L CU CU . D CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc14 D O ILE 2 D ILE 1 1_555 L CU CU . D CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc15 D N ILE 2 D ILE 1 1_555 L CU CU . D CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc16 D NE2 HIS 32 D HIS 31 1_555 L CU CU . D CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.907 ? metalc ? metalc17 E N MET 1 E MET 0 1_555 M CU CU . E CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc18 E O ILE 2 E ILE 1 1_555 M CU CU . E CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? metalc ? metalc19 E N ILE 2 E ILE 1 1_555 M CU CU . E CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc20 E NE2 HIS 32 E HIS 31 1_555 M CU CU . E CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? metalc ? metalc21 F N MET 1 F MET 0 1_555 N CU CU . F CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc22 F O ILE 2 F ILE 1 1_555 N CU CU . F CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.901 ? metalc ? metalc23 F N ILE 2 F ILE 1 1_555 N CU CU . F CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc24 F NE2 HIS 32 F HIS 31 1_555 N CU CU . F CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? # _chem_comp.formula 'C17 H19 N2 S 1' _chem_comp.formula_weight 283.411 _chem_comp.id TFX _chem_comp.mon_nstd_flag . _chem_comp.name 2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Thioflavin T' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C8 TFX doub 290 n y N1 C9 TFX sing 291 n y N1 C17 TFX sing 292 n n S1 C8 TFX sing 293 n y S1 C10 TFX sing 294 n y C2 N2 TFX sing 295 n n C2 C3 TFX doub 296 n y C2 C7 TFX sing 297 n y N2 C15 TFX sing 298 n n N2 C16 TFX sing 299 n n C3 C4 TFX sing 300 n y C4 C5 TFX doub 301 n y C5 C6 TFX sing 302 n y C5 C8 TFX sing 303 n y C6 C7 TFX doub 304 n y C9 C10 TFX doub 305 n y C9 C14 TFX sing 306 n y C10 C11 TFX sing 307 n y C11 C12 TFX doub 308 n y C12 C13 TFX sing 309 n y C12 C18 TFX sing 310 n n C13 C14 TFX doub 311 n y C3 H3 TFX sing 312 n n C4 H4 TFX sing 313 n n C6 H6 TFX sing 314 n n C7 H7 TFX sing 315 n n C11 H11 TFX sing 316 n n C13 H13 TFX sing 317 n n C14 H14 TFX sing 318 n n C15 H15 TFX sing 319 n n C15 H15A TFX sing 320 n n C15 H15B TFX sing 321 n n C16 H16 TFX sing 322 n n C16 H16A TFX sing 323 n n C16 H16B TFX sing 324 n n C17 H17 TFX sing 325 n n C17 H17A TFX sing 326 n n C17 H17B TFX sing 327 n n C18 H18 TFX sing 328 n n C18 H18A TFX sing 329 n n C18 H18B TFX sing 330 n n # _atom_sites.entry_id 3MZT _atom_sites.fract_transf_matrix[1][1] 0.010765 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008577 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015079 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 CU A 1 201 201 CU CU . H 3 TFX B 1 100 1 TFX TFX . I 2 CU B 1 201 201 CU CU . J 2 CU C 1 201 201 CU CU . K 3 TFX D 1 100 1 TFX TFX . L 2 CU D 1 201 201 CU CU . M 2 CU E 1 201 201 CU CU . N 2 CU F 1 201 201 CU CU . O 3 TFX F 1 100 1 TFX TFX . P 4 HOH A 1 100 1 HOH HOH . P 4 HOH A 2 101 8 HOH HOH . P 4 HOH A 3 102 10 HOH HOH . P 4 HOH A 4 103 12 HOH HOH . P 4 HOH A 5 104 16 HOH HOH . P 4 HOH A 6 105 17 HOH HOH . P 4 HOH A 7 106 23 HOH HOH . P 4 HOH A 8 107 38 HOH HOH . P 4 HOH A 9 108 42 HOH HOH . P 4 HOH A 10 109 46 HOH HOH . Q 4 HOH B 1 101 6 HOH HOH . Q 4 HOH B 2 102 18 HOH HOH . Q 4 HOH B 3 103 21 HOH HOH . Q 4 HOH B 4 104 26 HOH HOH . Q 4 HOH B 5 105 30 HOH HOH . Q 4 HOH B 6 106 39 HOH HOH . Q 4 HOH B 7 107 44 HOH HOH . Q 4 HOH B 8 108 50 HOH HOH . Q 4 HOH B 9 109 54 HOH HOH . Q 4 HOH B 10 110 55 HOH HOH . R 4 HOH C 1 100 22 HOH HOH . R 4 HOH C 2 101 49 HOH HOH . S 4 HOH D 1 101 2 HOH HOH . S 4 HOH D 2 102 5 HOH HOH . S 4 HOH D 3 103 13 HOH HOH . S 4 HOH D 4 104 29 HOH HOH . S 4 HOH D 5 105 31 HOH HOH . S 4 HOH D 6 106 33 HOH HOH . S 4 HOH D 7 107 35 HOH HOH . S 4 HOH D 8 108 40 HOH HOH . S 4 HOH D 9 109 41 HOH HOH . S 4 HOH D 10 110 43 HOH HOH . S 4 HOH D 11 111 47 HOH HOH . S 4 HOH D 12 112 51 HOH HOH . T 4 HOH E 1 100 3 HOH HOH . T 4 HOH E 2 101 7 HOH HOH . T 4 HOH E 3 102 9 HOH HOH . T 4 HOH E 4 103 14 HOH HOH . T 4 HOH E 5 104 15 HOH HOH . T 4 HOH E 6 105 19 HOH HOH . T 4 HOH E 7 106 20 HOH HOH . T 4 HOH E 8 107 27 HOH HOH . T 4 HOH E 9 108 28 HOH HOH . T 4 HOH E 10 109 37 HOH HOH . U 4 HOH F 1 101 4 HOH HOH . U 4 HOH F 2 102 11 HOH HOH . U 4 HOH F 3 103 24 HOH HOH . U 4 HOH F 4 104 25 HOH HOH . U 4 HOH F 5 105 34 HOH HOH . U 4 HOH F 6 106 52 HOH HOH . U 4 HOH F 7 107 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 TFX . A . H 3 -26.098 -9.681 -11.191 0.5 83.55 ? N1 TFX 100 B 1 HETATM 2 N N1 TFX . B . H 3 -26.942 -8.347 -9.224 0.5 95.81 ? N1 TFX 100 B 1 HETATM 3 S S1 TFX . A . H 3 -26.532 -8.817 -8.777 0.5 89.87 ? S1 TFX 100 B 1 HETATM 4 S S1 TFX . B . H 3 -26.581 -10.113 -11.103 0.5 93.3 ? S1 TFX 100 B 1 HETATM 5 C C2 TFX . A . H 3 -26.523 -14.094 -7.337 0.5 125 ? C2 TFX 100 B 1 HETATM 6 C C2 TFX . B . H 3 -28.066 -13.711 -7.176 0.5 119.43 ? C2 TFX 100 B 1 HETATM 7 N N2 TFX . A . H 3 -26.506 -15.358 -6.573 0.5 126.91 ? N2 TFX 100 B 1 HETATM 8 N N2 TFX . B . H 3 -28.465 -14.925 -6.434 0.5 130.2 ? N2 TFX 100 B 1 HETATM 9 C C3 TFX . A . H 3 -27.691 -13.241 -7.373 0.5 126.48 ? C3 TFX 100 B 1 HETATM 10 C C3 TFX . B . H 3 -26.742 -13.57 -7.744 0.5 111.72 ? C3 TFX 100 B 1 HETATM 11 C C4 TFX . A . H 3 -27.681 -11.986 -8.141 0.5 112.81 ? C4 TFX 100 B 1 HETATM 12 C C4 TFX . B . H 3 -26.379 -12.347 -8.476 0.5 101.22 ? C4 TFX 100 B 1 HETATM 13 C C5 TFX . A . H 3 -26.413 -11.556 -8.913 0.5 89.32 ? C5 TFX 100 B 1 HETATM 14 C C5 TFX . B . H 3 -27.402 -11.201 -8.669 0.5 87.65 ? C5 TFX 100 B 1 HETATM 15 C C6 TFX . A . H 3 -25.219 -12.464 -8.863 0.5 90.32 ? C6 TFX 100 B 1 HETATM 16 C C6 TFX . B . H 3 -28.764 -11.366 -8.059 0.5 104.8 ? C6 TFX 100 B 1 HETATM 17 C C7 TFX . A . H 3 -25.217 -13.665 -8.136 0.5 109.52 ? C7 TFX 100 B 1 HETATM 18 C C7 TFX . B . H 3 -29.126 -12.531 -7.356 0.5 126.58 ? C7 TFX 100 B 1 HETATM 19 C C8 TFX . A . H 3 -26.321 -10.256 -9.778 0.5 87.63 ? C8 TFX 100 B 1 HETATM 20 C C8 TFX . B . H 3 -27.048 -9.869 -9.406 0.5 92.37 ? C8 TFX 100 B 1 HETATM 21 C C9 TFX . A . H 3 -26.154 -8.09 -11.248 0.5 82.68 ? C9 TFX 100 B 1 HETATM 22 C C9 TFX . B . H 3 -26.476 -7.574 -10.539 0.5 92.02 ? C9 TFX 100 B 1 HETATM 23 C C10 TFX . A . H 3 -26.405 -7.521 -9.824 0.5 81.27 ? C10 TFX 100 B 1 HETATM 24 C C10 TFX . B . H 3 -26.249 -8.588 -11.694 0.5 82.84 ? C10 TFX 100 B 1 HETATM 25 C C11 TFX . A . H 3 -26.479 -6.127 -9.654 0.5 82.1 ? C11 TFX 100 B 1 HETATM 26 C C11 TFX . B . H 3 -25.837 -8.104 -12.94 0.5 86.67 ? C11 TFX 100 B 1 HETATM 27 C C12 TFX . A . H 3 -26.315 -5.203 -10.834 0.5 86.74 ? C12 TFX 100 B 1 HETATM 28 C C12 TFX . B . H 3 -25.62 -6.623 -13.152 0.5 81.17 ? C12 TFX 100 B 1 HETATM 29 C C13 TFX . A . H 3 -26.081 -5.736 -12.159 0.5 86.1 ? C13 TFX 100 B 1 HETATM 30 C C13 TFX . B . H 3 -25.831 -5.679 -12.073 0.5 89.33 ? C13 TFX 100 B 1 HETATM 31 C C14 TFX . A . H 3 -26.002 -7.225 -12.351 0.5 81.57 ? C14 TFX 100 B 1 HETATM 32 C C14 TFX . B . H 3 -26.273 -6.189 -10.735 0.5 83.61 ? C14 TFX 100 B 1 HETATM 33 C C15 TFX . A . H 3 -27.677 -15.796 -5.843 0.5 107.74 ? C15 TFX 100 B 1 HETATM 34 C C15 TFX . B . H 3 -27.534 -16.018 -6.236 0.5 122.59 ? C15 TFX 100 B 1 HETATM 35 C C16 TFX . A . H 3 -25.308 -16.172 -6.543 0.5 136.29 ? C16 TFX 100 B 1 HETATM 36 C C16 TFX . B . H 3 -29.801 -15.025 -5.885 0.5 138.26 ? C16 TFX 100 B 1 HETATM 37 C C17 TFX . A . H 3 -25.874 -10.524 -12.315 0.5 101.68 ? C17 TFX 100 B 1 HETATM 38 C C17 TFX . B . H 3 -27.236 -7.722 -7.977 0.5 110.49 ? C17 TFX 100 B 1 HETATM 39 C C18 TFX . A . H 3 -26.389 -3.749 -10.68 0.5 86.24 ? C18 TFX 100 B 1 HETATM 40 C C18 TFX . B . H 3 -25.188 -6.089 -14.449 0.5 78.83 ? C18 TFX 100 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 40 #