data_3N0B
#
_model_server_result.job_id            uWlb9CF4rkiqH19bGTsdZQ 
_model_server_result.datetime_utc      '2025-06-21 19:41:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3n0b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":315}' 
#
_entry.id    3N0B 
#
_exptl.entry_id    3N0B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3N0B 
_cell.length_a            54.523 
_cell.length_b            116.754 
_cell.length_c            141.053 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3N0B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 I N N 
? 3 K N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     3N0B 
_atom_sites.fract_transf_matrix[1][1]    0.018341 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008565 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00709 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 UMP A 1 303 303 UMP UMP . 
F 3 FAD A 1 315 315 FAD FAD . 
G 2 UMP B 1 308 308 UMP UMP . 
H 3 FAD B 1 310 310 FAD FAD . 
I 3 FAD C 1 305 305 FAD FAD . 
J 2 UMP C 1 313 313 UMP UMP . 
K 3 FAD D 1 300 300 FAD FAD . 
L 2 UMP D 1 318 318 UMP UMP . 
M 4 HOH A 1 221 4 HOH HOH . 
M 4 HOH A 2 222 15 HOH HOH . 
M 4 HOH A 3 223 16 HOH HOH . 
M 4 HOH A 4 224 19 HOH HOH . 
M 4 HOH A 5 225 20 HOH HOH . 
M 4 HOH A 6 226 24 HOH HOH . 
M 4 HOH A 7 227 27 HOH HOH . 
M 4 HOH A 8 228 28 HOH HOH . 
M 4 HOH A 9 229 29 HOH HOH . 
M 4 HOH A 10 230 31 HOH HOH . 
M 4 HOH A 11 231 33 HOH HOH . 
M 4 HOH A 12 232 35 HOH HOH . 
M 4 HOH A 13 233 38 HOH HOH . 
N 4 HOH B 1 221 2 HOH HOH . 
N 4 HOH B 2 222 7 HOH HOH . 
N 4 HOH B 3 223 14 HOH HOH . 
N 4 HOH B 4 224 17 HOH HOH . 
N 4 HOH B 5 225 18 HOH HOH . 
N 4 HOH B 6 226 21 HOH HOH . 
N 4 HOH B 7 227 25 HOH HOH . 
N 4 HOH B 8 228 26 HOH HOH . 
N 4 HOH B 9 229 32 HOH HOH . 
N 4 HOH B 10 230 39 HOH HOH . 
O 4 HOH C 1 221 3 HOH HOH . 
O 4 HOH C 2 222 5 HOH HOH . 
O 4 HOH C 3 223 8 HOH HOH . 
O 4 HOH C 4 224 9 HOH HOH . 
O 4 HOH C 5 225 10 HOH HOH . 
O 4 HOH C 6 226 22 HOH HOH . 
O 4 HOH C 7 227 23 HOH HOH . 
O 4 HOH C 8 228 36 HOH HOH . 
O 4 HOH C 9 229 37 HOH HOH . 
P 4 HOH D 1 221 1 HOH HOH . 
P 4 HOH D 2 222 6 HOH HOH . 
P 4 HOH D 3 223 11 HOH HOH . 
P 4 HOH D 4 224 12 HOH HOH . 
P 4 HOH D 5 225 13 HOH HOH . 
P 4 HOH D 6 226 30 HOH HOH . 
P 4 HOH D 7 227 34 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . F 3 28.16 47.524 118.966 1 53.02 ? PA FAD 315 A 1 
HETATM 2 O O1A FAD . . . F 3 28.954 48.676 118.352 1 52.52 ? O1A FAD 315 A 1 
HETATM 3 O O2A FAD . . . F 3 28.751 46.625 120.033 1 50.21 ? O2A FAD 315 A 1 
HETATM 4 O O5B FAD . . . F 3 27.77 46.617 117.705 1 53.8 ? O5B FAD 315 A 1 
HETATM 5 C C5B FAD . . . F 3 27.082 47.186 116.592 1 53.92 ? C5B FAD 315 A 1 
HETATM 6 C C4B FAD . . . F 3 26.441 46.029 115.852 1 53.98 ? C4B FAD 315 A 1 
HETATM 7 O O4B FAD . . . F 3 27.461 45.122 115.442 1 55.83 ? O4B FAD 315 A 1 
HETATM 8 C C3B FAD . . . F 3 25.565 45.201 116.769 1 55.14 ? C3B FAD 315 A 1 
HETATM 9 O O3B FAD . . . F 3 24.221 45.685 116.711 1 57.14 ? O3B FAD 315 A 1 
HETATM 10 C C2B FAD . . . F 3 25.724 43.767 116.275 1 55.86 ? C2B FAD 315 A 1 
HETATM 11 O O2B FAD . . . F 3 24.907 43.551 115.11 1 57.09 ? O2B FAD 315 A 1 
HETATM 12 C C1B FAD . . . F 3 27.143 43.752 115.761 1 54.05 ? C1B FAD 315 A 1 
HETATM 13 N N9A FAD . . . F 3 28.213 43.115 116.591 1 52.18 ? N9A FAD 315 A 1 
HETATM 14 C C8A FAD . . . F 3 29.372 43.693 116.973 1 50.87 ? C8A FAD 315 A 1 
HETATM 15 N N7A FAD . . . F 3 30.189 42.856 117.654 1 49.82 ? N7A FAD 315 A 1 
HETATM 16 C C5A FAD . . . F 3 29.539 41.668 117.72 1 51.53 ? C5A FAD 315 A 1 
HETATM 17 C C6A FAD . . . F 3 29.813 40.405 118.275 1 50.07 ? C6A FAD 315 A 1 
HETATM 18 N N6A FAD . . . F 3 30.978 40.157 118.946 1 49.49 ? N6A FAD 315 A 1 
HETATM 19 N N1A FAD . . . F 3 28.899 39.418 118.112 1 46.7 ? N1A FAD 315 A 1 
HETATM 20 C C2A FAD . . . F 3 27.746 39.605 117.44 1 49.04 ? C2A FAD 315 A 1 
HETATM 21 N N3A FAD . . . F 3 27.404 40.787 116.886 1 51.1 ? N3A FAD 315 A 1 
HETATM 22 C C4A FAD . . . F 3 28.25 41.845 116.995 1 51.53 ? C4A FAD 315 A 1 
HETATM 23 N N1 FAD . . . F 3 25.112 46.297 128.882 1 67.77 ? N1 FAD 315 A 1 
HETATM 24 C C2 FAD . . . F 3 25.395 45.463 129.791 1 67.55 ? C2 FAD 315 A 1 
HETATM 25 O O2 FAD . . . F 3 26.437 44.86 129.707 1 65.81 ? O2 FAD 315 A 1 
HETATM 26 N N3 FAD . . . F 3 24.6 45.273 130.856 1 69.93 ? N3 FAD 315 A 1 
HETATM 27 C C4 FAD . . . F 3 23.426 45.902 131.072 1 70.1 ? C4 FAD 315 A 1 
HETATM 28 O O4 FAD . . . F 3 22.737 45.69 132.058 1 71.23 ? O4 FAD 315 A 1 
HETATM 29 C C4X FAD . . . F 3 22.903 46.834 129.964 1 69.82 ? C4X FAD 315 A 1 
HETATM 30 N N5 FAD . . . F 3 21.751 47.745 130.025 1 69.24 ? N5 FAD 315 A 1 
HETATM 31 C C5X FAD . . . F 3 21.418 48.523 128.811 1 69.58 ? C5X FAD 315 A 1 
HETATM 32 C C6 FAD . . . F 3 20.21 49.485 128.844 1 69.14 ? C6 FAD 315 A 1 
HETATM 33 C C7 FAD . . . F 3 19.973 50.291 127.541 1 69.21 ? C7 FAD 315 A 1 
HETATM 34 C C7M FAD . . . F 3 18.804 51.28 127.444 1 69.15 ? C7M FAD 315 A 1 
HETATM 35 C C8 FAD . . . F 3 21.111 50.33 126.537 1 69.44 ? C8 FAD 315 A 1 
HETATM 36 C C8M FAD . . . F 3 20.98 51.199 125.319 1 70.28 ? C8M FAD 315 A 1 
HETATM 37 C C9 FAD . . . F 3 22.209 49.583 126.595 1 68.9 ? C9 FAD 315 A 1 
HETATM 38 C C9A FAD . . . F 3 22.489 48.714 127.735 1 68.3 ? C9A FAD 315 A 1 
HETATM 39 N N10 FAD . . . F 3 23.578 48.031 127.712 1 67.47 ? N10 FAD 315 A 1 
HETATM 40 C C10 FAD . . . F 3 23.845 47.027 128.753 1 68.35 ? C10 FAD 315 A 1 
HETATM 41 C C1' FAD . . . F 3 24.641 47.978 126.684 1 64.79 ? C1' FAD 315 A 1 
HETATM 42 C C2' FAD . . . F 3 24.328 46.999 125.53 1 65.2 ? C2' FAD 315 A 1 
HETATM 43 O O2' FAD . . . F 3 24.24 45.628 125.953 1 65.58 ? O2' FAD 315 A 1 
HETATM 44 C C3' FAD . . . F 3 25.367 47.048 124.409 1 63.94 ? C3' FAD 315 A 1 
HETATM 45 O O3' FAD . . . F 3 26.679 46.731 124.873 1 66.82 ? O3' FAD 315 A 1 
HETATM 46 C C4' FAD . . . F 3 25.472 48.413 123.763 1 63.32 ? C4' FAD 315 A 1 
HETATM 47 O O4' FAD . . . F 3 24.15 48.906 123.526 1 64.17 ? O4' FAD 315 A 1 
HETATM 48 C C5' FAD . . . F 3 26.228 48.28 122.451 1 62.79 ? C5' FAD 315 A 1 
HETATM 49 O O5' FAD . . . F 3 25.307 47.802 121.463 1 61.97 ? O5' FAD 315 A 1 
HETATM 50 P P FAD . . . F 3 25.757 46.91 120.205 1 60.46 ? P FAD 315 A 1 
HETATM 51 O O1P FAD . . . F 3 26.6 45.785 120.714 1 58.85 ? O1P FAD 315 A 1 
HETATM 52 O O2P FAD . . . F 3 24.52 46.615 119.389 1 61.51 ? O2P FAD 315 A 1 
HETATM 53 O O3P FAD . . . F 3 26.678 47.961 119.395 1 56.64 ? O3P FAD 315 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           258 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           53 
#