data_3N0Y # _model_server_result.job_id IZHxFIKifsg2--C-GVJEMw _model_server_result.datetime_utc '2024-11-07 10:02:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3n0y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":182}' # _entry.id 3N0Y # _exptl.entry_id 3N0Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.19 _cell.angle_gamma 90 _cell.entry_id 3N0Y _cell.length_a 64.349 _cell.length_b 38.063 _cell.length_c 81.217 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3N0Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 12 A GLU 12 1_555 D MN MN . A MN 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc2 A OE1 GLU 136 A GLU 136 1_555 D MN MN . A MN 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc3 A OE2 GLU 136 A GLU 136 1_555 D MN MN . A MN 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? metalc ? metalc4 C O1B APC . A APC 181 1_555 D MN MN . A MN 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc5 C O1A APC . A APC 181 1_555 D MN MN . A MN 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc6 B OE1 GLU 12 B GLU 12 1_555 F MN MN . B MN 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc7 B OE2 GLU 136 B GLU 136 1_555 F MN MN . B MN 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc8 B OE1 GLU 136 B GLU 136 1_555 F MN MN . B MN 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc9 E O1B APC . B APC 181 1_555 F MN MN . B MN 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc10 E O1G APC . B APC 181 1_555 F MN MN . B MN 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc11 E O1A APC . B APC 181 1_555 F MN MN . B MN 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3N0Y _atom_sites.fract_transf_matrix[1][1] 0.01554 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002513 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026272 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012473 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 APC A 1 181 181 APC APC . D 3 MN A 1 182 182 MN MN . E 2 APC B 1 181 181 APC APC . F 3 MN B 1 182 182 MN MN . G 4 HOH A 1 301 301 HOH HOH . G 4 HOH A 2 306 306 HOH HOH . G 4 HOH A 3 307 307 HOH HOH . G 4 HOH A 4 308 308 HOH HOH . G 4 HOH A 5 309 309 HOH HOH . G 4 HOH A 6 312 312 HOH HOH . G 4 HOH A 7 313 313 HOH HOH . G 4 HOH A 8 315 315 HOH HOH . G 4 HOH A 9 317 317 HOH HOH . G 4 HOH A 10 321 321 HOH HOH . G 4 HOH A 11 328 328 HOH HOH . G 4 HOH A 12 331 331 HOH HOH . G 4 HOH A 13 332 332 HOH HOH . G 4 HOH A 14 333 333 HOH HOH . G 4 HOH A 15 334 334 HOH HOH . G 4 HOH A 16 335 335 HOH HOH . G 4 HOH A 17 337 337 HOH HOH . G 4 HOH A 18 340 340 HOH HOH . G 4 HOH A 19 342 342 HOH HOH . G 4 HOH A 20 347 347 HOH HOH . G 4 HOH A 21 349 349 HOH HOH . G 4 HOH A 22 350 350 HOH HOH . G 4 HOH A 23 352 352 HOH HOH . G 4 HOH A 24 353 353 HOH HOH . G 4 HOH A 25 354 354 HOH HOH . G 4 HOH A 26 360 360 HOH HOH . G 4 HOH A 27 362 362 HOH HOH . G 4 HOH A 28 364 364 HOH HOH . G 4 HOH A 29 369 369 HOH HOH . G 4 HOH A 30 372 372 HOH HOH . G 4 HOH A 31 377 377 HOH HOH . G 4 HOH A 32 378 378 HOH HOH . G 4 HOH A 33 379 379 HOH HOH . G 4 HOH A 34 380 380 HOH HOH . G 4 HOH A 35 384 384 HOH HOH . G 4 HOH A 36 386 386 HOH HOH . G 4 HOH A 37 389 389 HOH HOH . G 4 HOH A 38 390 390 HOH HOH . G 4 HOH A 39 391 391 HOH HOH . G 4 HOH A 40 392 392 HOH HOH . G 4 HOH A 41 393 393 HOH HOH . G 4 HOH A 42 400 400 HOH HOH . G 4 HOH A 43 401 401 HOH HOH . G 4 HOH A 44 409 409 HOH HOH . G 4 HOH A 45 410 410 HOH HOH . G 4 HOH A 46 411 411 HOH HOH . G 4 HOH A 47 413 413 HOH HOH . G 4 HOH A 48 415 415 HOH HOH . G 4 HOH A 49 418 418 HOH HOH . G 4 HOH A 50 420 420 HOH HOH . G 4 HOH A 51 421 421 HOH HOH . G 4 HOH A 52 426 426 HOH HOH . G 4 HOH A 53 427 427 HOH HOH . G 4 HOH A 54 428 428 HOH HOH . G 4 HOH A 55 429 429 HOH HOH . G 4 HOH A 56 430 430 HOH HOH . G 4 HOH A 57 432 432 HOH HOH . G 4 HOH A 58 433 433 HOH HOH . G 4 HOH A 59 434 434 HOH HOH . G 4 HOH A 60 439 439 HOH HOH . G 4 HOH A 61 440 440 HOH HOH . G 4 HOH A 62 441 441 HOH HOH . G 4 HOH A 63 442 442 HOH HOH . G 4 HOH A 64 443 443 HOH HOH . G 4 HOH A 65 444 444 HOH HOH . G 4 HOH A 66 445 445 HOH HOH . G 4 HOH A 67 446 446 HOH HOH . G 4 HOH A 68 447 447 HOH HOH . G 4 HOH A 69 448 448 HOH HOH . G 4 HOH A 70 452 452 HOH HOH . G 4 HOH A 71 453 453 HOH HOH . G 4 HOH A 72 454 454 HOH HOH . H 4 HOH B 1 302 302 HOH HOH . H 4 HOH B 2 303 303 HOH HOH . H 4 HOH B 3 304 304 HOH HOH . H 4 HOH B 4 305 305 HOH HOH . H 4 HOH B 5 310 310 HOH HOH . H 4 HOH B 6 311 311 HOH HOH . H 4 HOH B 7 314 314 HOH HOH . H 4 HOH B 8 316 316 HOH HOH . H 4 HOH B 9 318 318 HOH HOH . H 4 HOH B 10 319 319 HOH HOH . H 4 HOH B 11 320 320 HOH HOH . H 4 HOH B 12 322 322 HOH HOH . H 4 HOH B 13 323 323 HOH HOH . H 4 HOH B 14 324 324 HOH HOH . H 4 HOH B 15 325 325 HOH HOH . H 4 HOH B 16 326 326 HOH HOH . H 4 HOH B 17 327 327 HOH HOH . H 4 HOH B 18 329 329 HOH HOH . H 4 HOH B 19 330 330 HOH HOH . H 4 HOH B 20 336 336 HOH HOH . H 4 HOH B 21 338 338 HOH HOH . H 4 HOH B 22 339 339 HOH HOH . H 4 HOH B 23 341 341 HOH HOH . H 4 HOH B 24 343 343 HOH HOH . H 4 HOH B 25 344 344 HOH HOH . H 4 HOH B 26 345 345 HOH HOH . H 4 HOH B 27 346 346 HOH HOH . H 4 HOH B 28 348 348 HOH HOH . H 4 HOH B 29 351 351 HOH HOH . H 4 HOH B 30 355 355 HOH HOH . H 4 HOH B 31 356 356 HOH HOH . H 4 HOH B 32 358 358 HOH HOH . H 4 HOH B 33 359 359 HOH HOH . H 4 HOH B 34 361 361 HOH HOH . H 4 HOH B 35 363 363 HOH HOH . H 4 HOH B 36 365 365 HOH HOH . H 4 HOH B 37 366 366 HOH HOH . H 4 HOH B 38 367 367 HOH HOH . H 4 HOH B 39 368 368 HOH HOH . H 4 HOH B 40 370 370 HOH HOH . H 4 HOH B 41 371 371 HOH HOH . H 4 HOH B 42 373 373 HOH HOH . H 4 HOH B 43 374 374 HOH HOH . H 4 HOH B 44 375 375 HOH HOH . H 4 HOH B 45 376 376 HOH HOH . H 4 HOH B 46 381 381 HOH HOH . H 4 HOH B 47 382 382 HOH HOH . H 4 HOH B 48 383 383 HOH HOH . H 4 HOH B 49 385 385 HOH HOH . H 4 HOH B 50 387 387 HOH HOH . H 4 HOH B 51 388 388 HOH HOH . H 4 HOH B 52 394 394 HOH HOH . H 4 HOH B 53 395 395 HOH HOH . H 4 HOH B 54 396 396 HOH HOH . H 4 HOH B 55 397 397 HOH HOH . H 4 HOH B 56 398 398 HOH HOH . H 4 HOH B 57 399 399 HOH HOH . H 4 HOH B 58 402 402 HOH HOH . H 4 HOH B 59 403 403 HOH HOH . H 4 HOH B 60 404 404 HOH HOH . H 4 HOH B 61 405 405 HOH HOH . H 4 HOH B 62 406 406 HOH HOH . H 4 HOH B 63 407 407 HOH HOH . H 4 HOH B 64 408 408 HOH HOH . H 4 HOH B 65 412 412 HOH HOH . H 4 HOH B 66 414 414 HOH HOH . H 4 HOH B 67 416 416 HOH HOH . H 4 HOH B 68 417 417 HOH HOH . H 4 HOH B 69 419 419 HOH HOH . H 4 HOH B 70 422 422 HOH HOH . H 4 HOH B 71 423 423 HOH HOH . H 4 HOH B 72 424 424 HOH HOH . H 4 HOH B 73 425 425 HOH HOH . H 4 HOH B 74 431 431 HOH HOH . H 4 HOH B 75 435 435 HOH HOH . H 4 HOH B 76 436 436 HOH HOH . H 4 HOH B 77 437 437 HOH HOH . H 4 HOH B 78 438 438 HOH HOH . H 4 HOH B 79 449 449 HOH HOH . H 4 HOH B 80 451 451 HOH HOH . H 4 HOH B 81 455 455 HOH HOH . H 4 HOH B 82 456 456 HOH HOH . H 4 HOH B 83 458 458 HOH HOH . H 4 HOH B 84 459 459 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 15.804 _atom_site.Cartn_y -4.109 _atom_site.Cartn_z 43.19 _atom_site.occupancy 0.8 _atom_site.B_iso_or_equiv 33.45 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 182 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 358 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #