data_3N1P # _model_server_result.job_id Dl43tLhoCQBFIponJSNmtg _model_server_result.datetime_utc '2024-12-21 12:57:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3n1p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":196}' # _entry.id 3N1P # _exptl.entry_id 3N1P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3N1P _cell.length_a 38.913 _cell.length_b 63.228 _cell.length_c 106.312 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3N1P _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 F O HOH . B HOH 2 1_555 E CA CA . B CA 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.93 ? metalc ? metalc2 A OE1 GLU 70 B GLU 94 1_555 D CA CA . B CA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? metalc ? metalc3 A OE2 GLU 70 B GLU 94 1_555 D CA CA . B CA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? metalc ? metalc4 A OE2 GLU 71 B GLU 95 1_555 D CA CA . B CA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? metalc ? metalc5 A OE2 GLU 71 B GLU 95 1_555 E CA CA . B CA 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? metalc ? metalc6 A OD1 ASP 76 B ASP 100 1_555 D CA CA . B CA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? metalc ? metalc7 A OD2 ASP 76 B ASP 100 1_555 D CA CA . B CA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? metalc ? metalc8 A O THR 106 B THR 130 1_555 D CA CA . B CA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? metalc ? metalc9 A OE2 GLU 107 B GLU 131 1_555 D CA CA . B CA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.973 ? metalc ? metalc10 A OE2 GLU 107 B GLU 131 1_555 E CA CA . B CA 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? metalc ? metalc11 A OE1 GLU 107 B GLU 131 1_555 E CA CA . B CA 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.94 ? metalc ? metalc12 A OD1 ASP 110 B ASP 134 1_555 E CA CA . B CA 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.731 ? metalc ? metalc13 A OD2 ASP 112 B ASP 136 1_555 E CA CA . B CA 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.768 ? metalc ? metalc14 A NE2 HIS 121 B HIS 145 1_555 C ZN ZN . B ZN 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? metalc ? metalc15 A OD1 ASP 128 B ASP 152 1_555 C ZN ZN . B ZN 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc16 A ND1 HIS 163 B HIS 187 1_555 C ZN ZN . B ZN 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? metalc ? metalc17 E CA CA . B CA 196 1_555 G O HOH . C HOH 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.93 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3N1P _atom_sites.fract_transf_matrix[1][1] 0.025698 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015816 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009406 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN B 1 194 193 ZN ZN . D 4 CA B 1 195 194 CA CA . E 4 CA B 1 196 195 CA CA . F 5 HOH B 1 2 2 HOH HOH . F 5 HOH B 2 3 3 HOH HOH . G 5 HOH C 1 1 1 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 5.631 _atom_site.Cartn_y -7.68 _atom_site.Cartn_z -17.283 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 196 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #