data_3N2G # _model_server_result.job_id lDge7WXRutWLofWBohrn-Q _model_server_result.datetime_utc '2025-07-05 06:26:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3n2g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":700}' # _entry.id 3N2G # _exptl.entry_id 3N2G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 325.365 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl [(2R)-5-amino-2-methyl-3-phenyl-1,2-dihydropyrido[3,4-b]pyrazin-7-yl]carbamate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3N2G _cell.length_a 328.553 _cell.length_b 328.553 _cell.length_c 54.745 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3N2G _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 J N N ? 7 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 F O3G GTP . A GTP 600 1_555 G MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? metalc ? metalc2 C OD1 ASP 98 C ASP 98 1_555 L MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.937 ? metalc ? metalc3 K O2B GTP . C GTP 600 1_555 L MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.818 ? metalc ? metalc4 K O3G GTP . C GTP 600 1_555 L MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? # _chem_comp.formula 'C17 H19 N5 O2' _chem_comp.formula_weight 325.365 _chem_comp.id G2N _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl [(2R)-5-amino-2-methyl-3-phenyl-1,2-dihydropyrido[3,4-b]pyrazin-7-yl]carbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAC CAS G2N sing 83 n n CAE CAF G2N sing 84 n y CAF CAH G2N doub 85 n y CAG CAE G2N doub 86 n y CAG CAI G2N sing 87 n y CAI CAT G2N doub 88 n y CAJ CAU G2N sing 89 n y CAK CAA G2N sing 90 n n NAL CAW G2N sing 91 n n NAM CAU G2N doub 92 n y NAN CAQ G2N sing 93 n n NAO CAV G2N sing 94 n n OAP CAK G2N sing 95 n n CAQ OAD G2N doub 96 n n CAQ OAP G2N sing 97 n n CAR NAL G2N doub 98 n n CAS NAM G2N sing 99 n y CAT CAH G2N sing 100 n y CAT CAR G2N sing 101 n n CAU NAN G2N sing 102 n n CAV CAJ G2N doub 103 n y CAW CAS G2N doub 104 n y CAW CAV G2N sing 105 n y CAX CAB G2N sing 106 n n CAX NAO G2N sing 107 n n CAX CAR G2N sing 108 n n CAA HAA G2N sing 109 n n CAA HAAA G2N sing 110 n n CAA H3 G2N sing 111 n n CAB HAB G2N sing 112 n n CAB HABA G2N sing 113 n n CAB HABB G2N sing 114 n n NAC HNAC G2N sing 115 n n NAC HNAA G2N sing 116 n n CAE HAE G2N sing 117 n n CAF HAF G2N sing 118 n n CAG HAG G2N sing 119 n n CAH HAH G2N sing 120 n n CAI HAI G2N sing 121 n n CAJ HAJ G2N sing 122 n n CAK HAK G2N sing 123 n n CAK H16 G2N sing 124 n n NAN HNAN G2N sing 125 n n NAO H18 G2N sing 126 n n CAX H19 G2N sing 127 n n # _atom_sites.entry_id 3N2G _atom_sites.fract_transf_matrix[1][1] 0.003044 _atom_sites.fract_transf_matrix[1][2] 0.001757 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003515 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018267 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 4 GTP A 1 600 600 GTP GTP . G 5 MG A 1 601 601 MG MG . H 6 GDP B 1 600 600 GDP GDP . I 5 MG B 1 601 601 MG MG . J 7 G2N B 1 700 700 G2N G2N . K 4 GTP C 1 600 600 GTP GTP . L 5 MG C 1 601 601 MG MG . M 6 GDP D 1 600 600 GDP GDP . N 7 G2N D 1 700 700 G2N G2N . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA G2N . . . J 7 109.366 81.025 9.716 1 75.62 ? CAA G2N 700 B 1 HETATM 2 C CAB G2N . . . J 7 116.932 84.26 5.84 1 75.96 ? CAB G2N 700 B 1 HETATM 3 N NAC G2N . . . J 7 112.614 88.448 6.295 1 77.94 ? NAC G2N 700 B 1 HETATM 4 O OAD G2N . . . J 7 109.031 83.122 8.624 1 82.1 ? OAD G2N 700 B 1 HETATM 5 C CAE G2N . . . J 7 118.228 89.438 4.36 1 79.54 ? CAE G2N 700 B 1 HETATM 6 C CAF G2N . . . J 7 117.743 89.194 5.646 1 79.27 ? CAF G2N 700 B 1 HETATM 7 C CAG G2N . . . J 7 117.866 88.649 3.261 1 78.72 ? CAG G2N 700 B 1 HETATM 8 C CAH G2N . . . J 7 116.881 88.125 5.804 1 79.01 ? CAH G2N 700 B 1 HETATM 9 C CAI G2N . . . J 7 116.99 87.583 3.43 1 78.5 ? CAI G2N 700 B 1 HETATM 10 C CAJ G2N . . . J 7 112.43 84.332 6.658 1 77.53 ? CAJ G2N 700 B 1 HETATM 11 C CAK G2N . . . J 7 110.597 81.182 8.795 1 78.13 ? CAK G2N 700 B 1 HETATM 12 N NAL G2N . . . J 7 114.558 86.933 5.435 1 78.02 ? NAL G2N 700 B 1 HETATM 13 N NAM G2N . . . J 7 111.482 86.5 7.012 1 77.9 ? NAM G2N 700 B 1 HETATM 14 N NAN G2N . . . J 7 110.356 84.657 7.683 1 79.14 ? NAN G2N 700 B 1 HETATM 15 N NAO G2N . . . J 7 114.588 84.169 5.524 1 78.24 ? NAO G2N 700 B 1 HETATM 16 O OAP G2N . . . J 7 111.093 82.468 8.191 1 78.93 ? OAP G2N 700 B 1 HETATM 17 C CAQ G2N . . . J 7 110.133 83.429 8.162 1 80.16 ? CAQ G2N 700 B 1 HETATM 18 C CAR G2N . . . J 7 115.646 86.321 5.03 1 77.43 ? CAR G2N 700 B 1 HETATM 19 C CAS G2N . . . J 7 112.518 87.113 6.431 1 78.41 ? CAS G2N 700 B 1 HETATM 20 C CAT G2N . . . J 7 116.533 87.317 4.713 1 78.34 ? CAT G2N 700 B 1 HETATM 21 C CAU G2N . . . J 7 111.436 85.161 7.14 1 77.61 ? CAU G2N 700 B 1 HETATM 22 C CAV G2N . . . J 7 113.519 84.933 6.048 1 78.47 ? CAV G2N 700 B 1 HETATM 23 C CAW G2N . . . J 7 113.521 86.316 5.927 1 78.5 ? CAW G2N 700 B 1 HETATM 24 C CAX G2N . . . J 7 115.797 84.779 4.97 1 76.78 ? CAX G2N 700 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 24 #