data_3N2K # _model_server_result.job_id 4hhXBz0kq_KzKOhuConJEQ _model_server_result.datetime_utc '2025-07-04 20:39:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3n2k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":700}' # _entry.id 3N2K # _exptl.entry_id 3N2K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 325.365 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl [(2S)-5-amino-2-methyl-3-phenyl-1,2-dihydropyrido[3,4-b]pyrazin-7-yl]carbamate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3N2K _cell.length_a 326.321 _cell.length_b 326.321 _cell.length_c 54.057 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3N2K _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 J N N ? 7 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 F O3G GTP . A GTP 600 1_555 G MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.884 ? metalc ? metalc2 B OE1 GLN 11 B GLN 11 1_555 I MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.911 ? metalc ? metalc3 K O3G GTP . C GTP 600 1_555 L MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.869 ? # _chem_comp.formula 'C17 H19 N5 O2' _chem_comp.formula_weight 325.365 _chem_comp.id K2N _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl [(2S)-5-amino-2-methyl-3-phenyl-1,2-dihydropyrido[3,4-b]pyrazin-7-yl]carbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAB CAX K2N sing 266 n n NAC CAT K2N sing 267 n n CAE CAF K2N sing 268 n y CAF CAH K2N doub 269 n y CAG CAE K2N doub 270 n y CAG CAI K2N sing 271 n y CAI CAS K2N doub 272 n y CAJ CAU K2N sing 273 n y CAK CAA K2N sing 274 n n NAL CAW K2N sing 275 n n NAM CAU K2N doub 276 n y NAN CAQ K2N sing 277 n n NAO CAV K2N sing 278 n n OAP CAK K2N sing 279 n n OAP CAQ K2N sing 280 n n CAQ OAD K2N doub 281 n n CAR NAL K2N doub 282 n n CAS CAH K2N sing 283 n y CAS CAR K2N sing 284 n n CAT NAM K2N sing 285 n y CAU NAN K2N sing 286 n n CAV CAJ K2N doub 287 n y CAW CAT K2N doub 288 n y CAW CAV K2N sing 289 n y CAX NAO K2N sing 290 n n CAX CAR K2N sing 291 n n CAA HAA K2N sing 292 n n CAA HAAA K2N sing 293 n n CAA H3 K2N sing 294 n n CAB HAB K2N sing 295 n n CAB HABA K2N sing 296 n n CAB HABB K2N sing 297 n n NAC HNAC K2N sing 298 n n NAC HNAA K2N sing 299 n n CAE HAE K2N sing 300 n n CAF HAF K2N sing 301 n n CAG HAG K2N sing 302 n n CAH HAH K2N sing 303 n n CAJ HAJ K2N sing 304 n n NAN HNAN K2N sing 305 n n NAO HNAO K2N sing 306 n n CAX HAX K2N sing 307 n n CAI HAI K2N sing 308 n n CAK HAK K2N sing 309 n n CAK H19 K2N sing 310 n n # _atom_sites.entry_id 3N2K _atom_sites.fract_transf_matrix[1][1] 0.003064 _atom_sites.fract_transf_matrix[1][2] 0.001769 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003539 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018499 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 4 GTP A 1 600 600 GTP GTP . G 5 MG A 1 601 601 MG MG . H 6 GDP B 1 600 600 GDP GDP . I 5 MG B 1 601 601 MG MG . J 7 K2N B 1 700 700 K2N K2N . K 4 GTP C 1 600 600 GTP GTP . L 5 MG C 1 601 601 MG MG . M 6 GDP D 1 600 600 GDP GDP . N 7 K2N D 1 700 700 K2N K2N . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA K2N . . . J 7 108.669 81.602 10.135 1 71.37 ? CAA K2N 700 B 1 HETATM 2 C CAB K2N . . . J 7 113.652 85.149 3.395 1 62.07 ? CAB K2N 700 B 1 HETATM 3 N NAC K2N . . . J 7 110.777 88.649 6.211 1 68.35 ? NAC K2N 700 B 1 HETATM 4 O OAD K2N . . . J 7 107.69 82.929 8.445 1 66.58 ? OAD K2N 700 B 1 HETATM 5 C CAE K2N . . . J 7 117.421 89.444 3.939 1 63.65 ? CAE K2N 700 B 1 HETATM 6 C CAF K2N . . . J 7 116.764 89.552 5.153 1 63.82 ? CAF K2N 700 B 1 HETATM 7 C CAG K2N . . . J 7 116.965 88.534 2.991 1 63.83 ? CAG K2N 700 B 1 HETATM 8 C CAH K2N . . . J 7 115.656 88.743 5.393 1 64.17 ? CAH K2N 700 B 1 HETATM 9 C CAI K2N . . . J 7 115.849 87.729 3.242 1 63.91 ? CAI K2N 700 B 1 HETATM 10 C CAJ K2N . . . J 7 111.258 84.645 6.728 1 65.15 ? CAJ K2N 700 B 1 HETATM 11 C CAK K2N . . . J 7 109.916 82.104 9.362 1 70.58 ? CAK K2N 700 B 1 HETATM 12 N NAL K2N . . . J 7 113.03 87.572 5.4 1 62.5 ? NAL K2N 700 B 1 HETATM 13 N NAM K2N . . . J 7 109.964 86.568 6.981 1 66.22 ? NAM K2N 700 B 1 HETATM 14 N NAN K2N . . . J 7 109.021 84.612 7.718 1 65.84 ? NAN K2N 700 B 1 HETATM 15 N NAO K2N . . . J 7 113.445 84.863 5.68 1 63.2 ? NAO K2N 700 B 1 HETATM 16 O OAP K2N . . . J 7 109.725 82.383 7.96 1 67.74 ? OAP K2N 700 B 1 HETATM 17 C CAQ K2N . . . J 7 108.777 83.328 8.018 1 66.7 ? CAQ K2N 700 B 1 HETATM 18 C CAR K2N . . . J 7 114.098 87.055 4.824 1 61.93 ? CAR K2N 700 B 1 HETATM 19 C CAS K2N . . . J 7 115.162 87.849 4.441 1 63.12 ? CAS K2N 700 B 1 HETATM 20 C CAT K2N . . . J 7 110.92 87.339 6.392 1 66.42 ? CAT K2N 700 B 1 HETATM 21 C CAU K2N . . . J 7 110.087 85.245 7.189 1 65.34 ? CAU K2N 700 B 1 HETATM 22 C CAV K2N . . . J 7 112.256 85.429 6.114 1 64.48 ? CAV K2N 700 B 1 HETATM 23 C CAW K2N . . . J 7 112.077 86.786 5.908 1 64.62 ? CAW K2N 700 B 1 HETATM 24 C CAX K2N . . . J 7 114.236 85.558 4.695 1 61.62 ? CAX K2N 700 B 1 # _model_server_stats.io_time_ms 168 _model_server_stats.parse_time_ms 38 _model_server_stats.create_model_time_ms 59 _model_server_stats.query_time_ms 227 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 24 #