data_3N3B
#
_model_server_result.job_id            kTAgtWMJ2DS7Kbn4Xrx_PQ 
_model_server_result.datetime_utc      '2024-11-22 23:17:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3n3b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":320}' 
#
_entry.id    3N3B 
#
_exptl.entry_id    3N3B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3N3B 
_cell.length_a            75.723 
_cell.length_b            91.348 
_cell.length_c            144.114 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3N3B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 67 B ASP 67 1_555 E MN MN . B MN 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
metalc ? metalc2 A OE1 GLU 98 B GLU 98 1_555 E MN MN . B MN 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc3 A OE2 GLU 98 B GLU 98 1_555 F MN MN . B MN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc4 A ND1 HIS 101 B HIS 101 1_555 E MN MN . B MN 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? 
metalc ? metalc5 A OE1 GLU 158 B GLU 158 1_555 E MN MN . B MN 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc6 A OE2 GLU 158 B GLU 158 1_555 F MN MN . B MN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
metalc ? metalc7 A OE2 GLU 192 B GLU 192 1_555 E MN MN . B MN 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? 
metalc ? metalc8 A OE1 GLU 192 B GLU 192 1_555 F MN MN . B MN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? 
metalc ? metalc9 A OE2 GLU 192 B GLU 192 1_555 F MN MN . B MN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? 
metalc ? metalc10 A ND1 HIS 195 B HIS 195 1_555 F MN MN . B MN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc11 E MN MN . B MN 320 1_555 M O HOH . B HOH 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc12 F MN MN . B MN 321 1_555 M O HOH . B HOH 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
metalc ? metalc13 C OD1 ASP 67 A ASP 67 1_555 I MN MN . A MN 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc14 C OE1 GLU 98 A GLU 98 1_555 I MN MN . A MN 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc15 C OE2 GLU 98 A GLU 98 1_555 J MN MN . A MN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc16 C ND1 HIS 101 A HIS 101 1_555 I MN MN . A MN 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
metalc ? metalc17 C OE1 GLU 158 A GLU 158 1_555 I MN MN . A MN 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? 
metalc ? metalc18 C OE2 GLU 158 A GLU 158 1_555 J MN MN . A MN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? 
metalc ? metalc19 C OE2 GLU 192 A GLU 192 1_555 I MN MN . A MN 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc20 C OE1 GLU 192 A GLU 192 1_555 J MN MN . A MN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc21 C OE2 GLU 192 A GLU 192 1_555 J MN MN . A MN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? 
metalc ? metalc22 C ND1 HIS 195 A HIS 195 1_555 J MN MN . A MN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc23 I MN MN . A MN 320 1_555 O O HOH . A HOH 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? 
metalc ? metalc24 J MN MN . A MN 321 1_555 O O HOH . A HOH 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3N3B 
_atom_sites.fract_transf_matrix[1][1]    0.013206 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010947 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006939 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 MN B 1 320 1 MN MN . 
F 3 MN B 1 321 1 MN MN . 
G 4 PEO B 1 322 1 PEO PEO . 
H 5 FMN C 1 134 1 FMN FMN . 
I 3 MN A 1 320 1 MN MN . 
J 3 MN A 1 321 1 MN MN . 
K 4 PEO A 1 322 1 PEO PEO . 
L 5 FMN D 1 134 1 FMN FMN . 
M 6 HOH B 1 323 54 HOH HOH . 
M 6 HOH B 2 324 56 HOH HOH . 
M 6 HOH B 3 325 59 HOH HOH . 
M 6 HOH B 4 326 60 HOH HOH . 
M 6 HOH B 5 327 61 HOH HOH . 
M 6 HOH B 6 328 62 HOH HOH . 
M 6 HOH B 7 329 69 HOH HOH . 
M 6 HOH B 8 330 71 HOH HOH . 
M 6 HOH B 9 331 74 HOH HOH . 
M 6 HOH B 10 332 75 HOH HOH . 
M 6 HOH B 11 333 79 HOH HOH . 
M 6 HOH B 12 334 86 HOH HOH . 
M 6 HOH B 13 335 87 HOH HOH . 
M 6 HOH B 14 336 88 HOH HOH . 
M 6 HOH B 15 337 89 HOH HOH . 
M 6 HOH B 16 338 91 HOH HOH . 
M 6 HOH B 17 339 92 HOH HOH . 
M 6 HOH B 18 340 93 HOH HOH . 
M 6 HOH B 19 341 94 HOH HOH . 
M 6 HOH B 20 342 95 HOH HOH . 
M 6 HOH B 21 343 97 HOH HOH . 
M 6 HOH B 22 344 100 HOH HOH . 
M 6 HOH B 23 345 102 HOH HOH . 
M 6 HOH B 24 346 104 HOH HOH . 
M 6 HOH B 25 347 106 HOH HOH . 
M 6 HOH B 26 348 107 HOH HOH . 
M 6 HOH B 27 349 109 HOH HOH . 
M 6 HOH B 28 350 110 HOH HOH . 
M 6 HOH B 29 351 112 HOH HOH . 
M 6 HOH B 30 352 115 HOH HOH . 
M 6 HOH B 31 353 117 HOH HOH . 
M 6 HOH B 32 354 118 HOH HOH . 
M 6 HOH B 33 355 122 HOH HOH . 
M 6 HOH B 34 356 125 HOH HOH . 
M 6 HOH B 35 357 127 HOH HOH . 
M 6 HOH B 36 358 128 HOH HOH . 
M 6 HOH B 37 359 129 HOH HOH . 
M 6 HOH B 38 360 131 HOH HOH . 
M 6 HOH B 39 361 132 HOH HOH . 
M 6 HOH B 40 362 133 HOH HOH . 
M 6 HOH B 41 363 135 HOH HOH . 
M 6 HOH B 42 364 137 HOH HOH . 
M 6 HOH B 43 365 138 HOH HOH . 
M 6 HOH B 44 366 139 HOH HOH . 
M 6 HOH B 45 367 141 HOH HOH . 
M 6 HOH B 46 368 147 HOH HOH . 
M 6 HOH B 47 369 148 HOH HOH . 
M 6 HOH B 48 370 149 HOH HOH . 
M 6 HOH B 49 371 152 HOH HOH . 
M 6 HOH B 50 372 153 HOH HOH . 
M 6 HOH B 51 373 155 HOH HOH . 
M 6 HOH B 52 374 156 HOH HOH . 
M 6 HOH B 53 375 159 HOH HOH . 
M 6 HOH B 54 376 160 HOH HOH . 
M 6 HOH B 55 381 1 HOH HOH . 
M 6 HOH B 56 382 5 HOH HOH . 
M 6 HOH B 57 383 6 HOH HOH . 
M 6 HOH B 58 384 7 HOH HOH . 
M 6 HOH B 59 385 8 HOH HOH . 
M 6 HOH B 60 386 11 HOH HOH . 
M 6 HOH B 61 387 12 HOH HOH . 
M 6 HOH B 62 388 14 HOH HOH . 
M 6 HOH B 63 389 16 HOH HOH . 
M 6 HOH B 64 390 19 HOH HOH . 
M 6 HOH B 65 391 20 HOH HOH . 
M 6 HOH B 66 392 21 HOH HOH . 
M 6 HOH B 67 393 22 HOH HOH . 
M 6 HOH B 68 394 23 HOH HOH . 
M 6 HOH B 69 395 24 HOH HOH . 
M 6 HOH B 70 396 26 HOH HOH . 
M 6 HOH B 71 397 27 HOH HOH . 
M 6 HOH B 72 398 29 HOH HOH . 
M 6 HOH B 73 399 32 HOH HOH . 
M 6 HOH B 74 400 33 HOH HOH . 
M 6 HOH B 75 401 34 HOH HOH . 
M 6 HOH B 76 402 36 HOH HOH . 
M 6 HOH B 77 403 37 HOH HOH . 
M 6 HOH B 78 404 38 HOH HOH . 
M 6 HOH B 79 405 40 HOH HOH . 
M 6 HOH B 80 406 41 HOH HOH . 
M 6 HOH B 81 407 42 HOH HOH . 
M 6 HOH B 82 408 43 HOH HOH . 
M 6 HOH B 83 409 44 HOH HOH . 
M 6 HOH B 84 410 47 HOH HOH . 
M 6 HOH B 85 411 50 HOH HOH . 
M 6 HOH B 86 412 53 HOH HOH . 
N 6 HOH C 1 135 46 HOH HOH . 
N 6 HOH C 2 136 55 HOH HOH . 
N 6 HOH C 3 137 58 HOH HOH . 
N 6 HOH C 4 138 72 HOH HOH . 
N 6 HOH C 5 139 76 HOH HOH . 
N 6 HOH C 6 140 78 HOH HOH . 
N 6 HOH C 7 141 81 HOH HOH . 
N 6 HOH C 8 142 82 HOH HOH . 
N 6 HOH C 9 143 143 HOH HOH . 
N 6 HOH C 10 144 96 HOH HOH . 
N 6 HOH C 11 145 105 HOH HOH . 
N 6 HOH C 12 146 108 HOH HOH . 
N 6 HOH C 13 147 111 HOH HOH . 
N 6 HOH C 14 148 113 HOH HOH . 
N 6 HOH C 15 149 119 HOH HOH . 
N 6 HOH C 16 150 150 HOH HOH . 
N 6 HOH C 17 151 15 HOH HOH . 
O 6 HOH A 1 323 116 HOH HOH . 
O 6 HOH A 2 324 120 HOH HOH . 
O 6 HOH A 3 325 124 HOH HOH . 
O 6 HOH A 4 326 126 HOH HOH . 
O 6 HOH A 5 327 130 HOH HOH . 
O 6 HOH A 6 328 136 HOH HOH . 
O 6 HOH A 7 329 140 HOH HOH . 
O 6 HOH A 8 330 142 HOH HOH . 
O 6 HOH A 9 331 144 HOH HOH . 
O 6 HOH A 10 332 145 HOH HOH . 
O 6 HOH A 11 333 151 HOH HOH . 
O 6 HOH A 12 334 157 HOH HOH . 
O 6 HOH A 13 335 158 HOH HOH . 
O 6 HOH A 14 338 168 HOH HOH . 
O 6 HOH A 15 339 2 HOH HOH . 
O 6 HOH A 16 340 3 HOH HOH . 
O 6 HOH A 17 341 4 HOH HOH . 
O 6 HOH A 18 342 9 HOH HOH . 
O 6 HOH A 19 343 10 HOH HOH . 
O 6 HOH A 20 344 13 HOH HOH . 
O 6 HOH A 21 345 17 HOH HOH . 
O 6 HOH A 22 346 18 HOH HOH . 
O 6 HOH A 23 347 25 HOH HOH . 
O 6 HOH A 24 348 28 HOH HOH . 
O 6 HOH A 25 349 30 HOH HOH . 
O 6 HOH A 26 350 31 HOH HOH . 
O 6 HOH A 27 351 35 HOH HOH . 
O 6 HOH A 28 352 39 HOH HOH . 
O 6 HOH A 29 353 45 HOH HOH . 
O 6 HOH A 30 354 48 HOH HOH . 
O 6 HOH A 31 355 49 HOH HOH . 
O 6 HOH A 32 356 51 HOH HOH . 
O 6 HOH A 33 357 52 HOH HOH . 
O 6 HOH A 34 358 57 HOH HOH . 
O 6 HOH A 35 359 64 HOH HOH . 
O 6 HOH A 36 360 65 HOH HOH . 
O 6 HOH A 37 361 66 HOH HOH . 
O 6 HOH A 38 362 67 HOH HOH . 
O 6 HOH A 39 363 70 HOH HOH . 
O 6 HOH A 40 364 77 HOH HOH . 
O 6 HOH A 41 365 80 HOH HOH . 
O 6 HOH A 42 366 83 HOH HOH . 
O 6 HOH A 43 367 84 HOH HOH . 
O 6 HOH A 44 368 90 HOH HOH . 
O 6 HOH A 45 369 98 HOH HOH . 
O 6 HOH A 46 370 99 HOH HOH . 
O 6 HOH A 47 371 101 HOH HOH . 
O 6 HOH A 48 372 103 HOH HOH . 
O 6 HOH A 49 373 114 HOH HOH . 
P 6 HOH D 1 135 63 HOH HOH . 
P 6 HOH D 2 136 68 HOH HOH . 
P 6 HOH D 3 137 73 HOH HOH . 
P 6 HOH D 4 138 85 HOH HOH . 
P 6 HOH D 5 139 121 HOH HOH . 
P 6 HOH D 6 140 123 HOH HOH . 
P 6 HOH D 7 141 134 HOH HOH . 
P 6 HOH D 8 146 146 HOH HOH . 
P 6 HOH D 9 154 154 HOH HOH . 
P 6 HOH D 10 167 167 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -21.3 
_atom_site.Cartn_y               -50.938 
_atom_site.Cartn_z               28.389 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        21.53 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           320 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#