data_3N3L # _model_server_result.job_id AEdKmDbJL11sB2w4hxV4nw _model_server_result.datetime_utc '2024-11-06 01:40:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3n3l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":354}' # _entry.id 3N3L # _exptl.entry_id 3N3L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3N3L _cell.length_a 111.682 _cell.length_b 111.682 _cell.length_c 74.978 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3N3L _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 111.682 111.682 37.489 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 286 n n P O2 PO4 sing 287 n n P O3 PO4 sing 288 n n P O4 PO4 sing 289 n n # _atom_sites.entry_id 3N3L _atom_sites.fract_transf_matrix[1][1] 0.008954 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008954 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013337 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MS0 F 1 1 1 MS0 MS0 . C 2 MS0 F 1 2 2 MS0 MS0 . D 3 PO4 F 1 354 1 PO4 PO4 . E 4 HOH F 1 3 3 HOH HOH . E 4 HOH F 2 355 1 HOH HOH . E 4 HOH F 3 356 2 HOH HOH . E 4 HOH F 4 357 4 HOH HOH . E 4 HOH F 5 358 5 HOH HOH . E 4 HOH F 6 359 6 HOH HOH . E 4 HOH F 7 360 7 HOH HOH . E 4 HOH F 8 361 8 HOH HOH . E 4 HOH F 9 362 9 HOH HOH . E 4 HOH F 10 363 10 HOH HOH . E 4 HOH F 11 364 11 HOH HOH . E 4 HOH F 12 365 12 HOH HOH . E 4 HOH F 13 366 13 HOH HOH . E 4 HOH F 14 367 14 HOH HOH . E 4 HOH F 15 368 15 HOH HOH . E 4 HOH F 16 369 16 HOH HOH . E 4 HOH F 17 370 17 HOH HOH . E 4 HOH F 18 371 18 HOH HOH . E 4 HOH F 19 372 19 HOH HOH . E 4 HOH F 20 373 20 HOH HOH . E 4 HOH F 21 374 21 HOH HOH . E 4 HOH F 22 375 22 HOH HOH . E 4 HOH F 23 376 23 HOH HOH . E 4 HOH F 24 377 24 HOH HOH . E 4 HOH F 25 378 25 HOH HOH . E 4 HOH F 26 379 26 HOH HOH . E 4 HOH F 27 380 27 HOH HOH . E 4 HOH F 28 381 28 HOH HOH . E 4 HOH F 29 382 29 HOH HOH . E 4 HOH F 30 383 30 HOH HOH . E 4 HOH F 31 384 31 HOH HOH . E 4 HOH F 32 385 32 HOH HOH . E 4 HOH F 33 386 33 HOH HOH . E 4 HOH F 34 387 34 HOH HOH . E 4 HOH F 35 388 35 HOH HOH . E 4 HOH F 36 389 36 HOH HOH . E 4 HOH F 37 390 37 HOH HOH . E 4 HOH F 38 391 38 HOH HOH . E 4 HOH F 39 392 39 HOH HOH . E 4 HOH F 40 393 40 HOH HOH . E 4 HOH F 41 394 41 HOH HOH . E 4 HOH F 42 395 42 HOH HOH . E 4 HOH F 43 396 43 HOH HOH . E 4 HOH F 44 397 44 HOH HOH . E 4 HOH F 45 398 45 HOH HOH . E 4 HOH F 46 399 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 3 8.975 75.342 21.955 1 117.66 ? P PO4 354 F 1 HETATM 2 O O1 PO4 . . . D 3 9.845 75.264 23.169 1 111.24 ? O1 PO4 354 F 1 HETATM 3 O O2 PO4 . . . D 3 9.832 75.339 20.735 1 113.94 ? O2 PO4 354 F 1 HETATM 4 O O3 PO4 . . . D 3 8.048 74.164 21.92 1 110.64 ? O3 PO4 354 F 1 HETATM 5 O O4 PO4 . . . D 3 8.176 76.599 21.998 1 113.58 ? O4 PO4 354 F 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #