data_3N49 # _model_server_result.job_id '_mGErEl2mdxowkNfrgsk0A' _model_server_result.datetime_utc '2024-11-06 03:04:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3n49 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3N49 # _exptl.entry_id 3N49 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 242.293 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'naphtho[2,1-b]thiophen-1-ylacetic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3N49 _cell.length_a 111.229 _cell.length_b 111.229 _cell.length_c 78.339 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3N49 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 111.229 111.229 39.1695 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H10 O2 S' _chem_comp.formula_weight 242.293 _chem_comp.id 3N4 _chem_comp.mon_nstd_flag . _chem_comp.name 'naphtho[2,1-b]thiophen-1-ylacetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C2 3N4 sing 1 n y S1 C19 3N4 sing 2 n y C8 C2 3N4 doub 3 n y C2 C3 3N4 sing 4 n y C3 C4 3N4 doub 5 n y C3 C18 3N4 sing 6 n y C5 C4 3N4 sing 7 n y C4 C16 3N4 sing 8 n y C6 C5 3N4 doub 9 n y C5 C10 3N4 sing 10 n y C8 C6 3N4 sing 11 n y C6 H6 3N4 sing 12 n n C8 H8 3N4 sing 13 n n C10 C12 3N4 doub 14 n y C10 H10 3N4 sing 15 n n C12 C14 3N4 sing 16 n y C12 H12 3N4 sing 17 n n C16 C14 3N4 doub 18 n y C14 H14 3N4 sing 19 n n C16 H16 3N4 sing 20 n n C19 C18 3N4 doub 21 n y C18 C21 3N4 sing 22 n n C19 H19 3N4 sing 23 n n C24 C21 3N4 sing 24 n n C21 H21 3N4 sing 25 n n C21 H21A 3N4 sing 26 n n O26 C24 3N4 doub 27 n n O25 C24 3N4 sing 28 n n O25 HO25 3N4 sing 29 n n # _atom_sites.entry_id 3N49 _atom_sites.fract_transf_matrix[1][1] 0.00899 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00899 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012765 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3N4 F 1 1 1 3N4 3N4 . C 3 PO4 F 1 354 1 PO4 PO4 . D 4 HOH F 1 2 2 HOH HOH . D 4 HOH F 2 3 3 HOH HOH . D 4 HOH F 3 355 1 HOH HOH . D 4 HOH F 4 356 4 HOH HOH . D 4 HOH F 5 357 5 HOH HOH . D 4 HOH F 6 358 6 HOH HOH . D 4 HOH F 7 359 7 HOH HOH . D 4 HOH F 8 360 8 HOH HOH . D 4 HOH F 9 361 9 HOH HOH . D 4 HOH F 10 362 10 HOH HOH . D 4 HOH F 11 363 11 HOH HOH . D 4 HOH F 12 364 12 HOH HOH . D 4 HOH F 13 365 13 HOH HOH . D 4 HOH F 14 366 14 HOH HOH . D 4 HOH F 15 367 15 HOH HOH . D 4 HOH F 16 368 16 HOH HOH . D 4 HOH F 17 369 17 HOH HOH . D 4 HOH F 18 370 18 HOH HOH . D 4 HOH F 19 371 19 HOH HOH . D 4 HOH F 20 372 20 HOH HOH . D 4 HOH F 21 373 21 HOH HOH . D 4 HOH F 22 374 22 HOH HOH . D 4 HOH F 23 375 23 HOH HOH . D 4 HOH F 24 376 24 HOH HOH . D 4 HOH F 25 377 25 HOH HOH . D 4 HOH F 26 378 26 HOH HOH . D 4 HOH F 27 379 27 HOH HOH . D 4 HOH F 28 380 28 HOH HOH . D 4 HOH F 29 381 29 HOH HOH . D 4 HOH F 30 382 30 HOH HOH . D 4 HOH F 31 383 31 HOH HOH . D 4 HOH F 32 384 32 HOH HOH . D 4 HOH F 33 385 33 HOH HOH . D 4 HOH F 34 386 34 HOH HOH . D 4 HOH F 35 387 35 HOH HOH . D 4 HOH F 36 388 36 HOH HOH . D 4 HOH F 37 389 37 HOH HOH . D 4 HOH F 38 390 38 HOH HOH . D 4 HOH F 39 391 39 HOH HOH . D 4 HOH F 40 392 40 HOH HOH . D 4 HOH F 41 393 41 HOH HOH . D 4 HOH F 42 394 42 HOH HOH . D 4 HOH F 43 395 43 HOH HOH . D 4 HOH F 44 396 44 HOH HOH . D 4 HOH F 45 397 45 HOH HOH . D 4 HOH F 46 398 46 HOH HOH . D 4 HOH F 47 399 47 HOH HOH . D 4 HOH F 48 400 48 HOH HOH . D 4 HOH F 49 401 49 HOH HOH . D 4 HOH F 50 402 50 HOH HOH . D 4 HOH F 51 403 51 HOH HOH . D 4 HOH F 52 404 52 HOH HOH . D 4 HOH F 53 405 53 HOH HOH . D 4 HOH F 54 406 54 HOH HOH . D 4 HOH F 55 407 55 HOH HOH . D 4 HOH F 56 408 56 HOH HOH . D 4 HOH F 57 409 57 HOH HOH . D 4 HOH F 58 410 58 HOH HOH . D 4 HOH F 59 411 59 HOH HOH . D 4 HOH F 60 412 60 HOH HOH . D 4 HOH F 61 413 61 HOH HOH . D 4 HOH F 62 414 62 HOH HOH . D 4 HOH F 63 415 63 HOH HOH . D 4 HOH F 64 416 64 HOH HOH . D 4 HOH F 65 417 65 HOH HOH . D 4 HOH F 66 418 66 HOH HOH . D 4 HOH F 67 419 67 HOH HOH . D 4 HOH F 68 420 68 HOH HOH . D 4 HOH F 69 421 69 HOH HOH . D 4 HOH F 70 422 70 HOH HOH . D 4 HOH F 71 423 71 HOH HOH . D 4 HOH F 72 424 72 HOH HOH . D 4 HOH F 73 425 73 HOH HOH . D 4 HOH F 74 426 74 HOH HOH . D 4 HOH F 75 427 75 HOH HOH . D 4 HOH F 76 428 76 HOH HOH . D 4 HOH F 77 429 77 HOH HOH . D 4 HOH F 78 430 78 HOH HOH . D 4 HOH F 79 431 79 HOH HOH . D 4 HOH F 80 432 80 HOH HOH . D 4 HOH F 81 433 81 HOH HOH . D 4 HOH F 82 434 82 HOH HOH . D 4 HOH F 83 435 83 HOH HOH . D 4 HOH F 84 436 84 HOH HOH . D 4 HOH F 85 437 85 HOH HOH . D 4 HOH F 86 438 86 HOH HOH . D 4 HOH F 87 439 87 HOH HOH . D 4 HOH F 88 440 88 HOH HOH . D 4 HOH F 89 441 89 HOH HOH . D 4 HOH F 90 442 90 HOH HOH . D 4 HOH F 91 443 91 HOH HOH . D 4 HOH F 92 444 92 HOH HOH . D 4 HOH F 93 445 93 HOH HOH . D 4 HOH F 94 446 94 HOH HOH . D 4 HOH F 95 447 95 HOH HOH . D 4 HOH F 96 448 96 HOH HOH . D 4 HOH F 97 449 97 HOH HOH . D 4 HOH F 98 450 98 HOH HOH . D 4 HOH F 99 451 99 HOH HOH . D 4 HOH F 100 452 100 HOH HOH . D 4 HOH F 101 453 101 HOH HOH . D 4 HOH F 102 454 102 HOH HOH . D 4 HOH F 103 455 103 HOH HOH . D 4 HOH F 104 456 104 HOH HOH . D 4 HOH F 105 457 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 3N4 . . . B 2 1.128 73.423 27.961 1 60.52 ? S1 3N4 1 F 1 HETATM 2 C C2 3N4 . . . B 2 1.606 75.105 28.187 1 54.67 ? C2 3N4 1 F 1 HETATM 3 C C3 3N4 . . . B 2 2.948 75.329 28.501 1 53.78 ? C3 3N4 1 F 1 HETATM 4 C C4 3N4 . . . B 2 3.458 76.633 28.634 1 50.15 ? C4 3N4 1 F 1 HETATM 5 C C5 3N4 . . . B 2 2.574 77.733 28.476 1 48.19 ? C5 3N4 1 F 1 HETATM 6 C C6 3N4 . . . B 2 1.203 77.497 28.186 1 52.41 ? C6 3N4 1 F 1 HETATM 7 C C8 3N4 . . . B 2 0.709 76.171 28.049 1 52.82 ? C8 3N4 1 F 1 HETATM 8 C C10 3N4 . . . B 2 3.027 79.054 28.589 1 43.87 ? C10 3N4 1 F 1 HETATM 9 C C12 3N4 . . . B 2 4.398 79.285 28.813 1 43.89 ? C12 3N4 1 F 1 HETATM 10 C C14 3N4 . . . B 2 5.294 78.197 28.966 1 41.16 ? C14 3N4 1 F 1 HETATM 11 C C16 3N4 . . . B 2 4.828 76.885 28.917 1 43.39 ? C16 3N4 1 F 1 HETATM 12 C C18 3N4 . . . B 2 3.633 73.992 28.639 1 57.51 ? C18 3N4 1 F 1 HETATM 13 C C19 3N4 . . . B 2 2.802 72.954 28.452 1 54.95 ? C19 3N4 1 F 1 HETATM 14 C C21 3N4 . . . B 2 5.124 73.853 28.936 1 59.88 ? C21 3N4 1 F 1 HETATM 15 C C24 3N4 . . . B 2 5.875 73.782 27.508 1 62.48 ? C24 3N4 1 F 1 HETATM 16 O O25 3N4 . . . B 2 6.33 72.743 27.083 1 72.16 ? O25 3N4 1 F 1 HETATM 17 O O26 3N4 . . . B 2 6.031 74.859 26.733 1 55.87 ? O26 3N4 1 F 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 17 #