data_3N4P # _model_server_result.job_id 2GGCYJfYgwUpAhzWK8JXRA _model_server_result.datetime_utc '2025-03-06 22:31:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3n4p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":5}' # _entry.id 3N4P # _exptl.entry_id 3N4P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3N4P _cell.length_a 82.86 _cell.length_b 87.96 _cell.length_c 188.38 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3N4P _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,L,M 1 1 C,D,H,I,J,K,N,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E MG MG . A MG 4 1_555 A OD2 ASP 44 A ASP 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc2 E MG MG . A MG 4 1_555 A OD1 ASP 44 A ASP 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? metalc ? metalc3 E MG MG . A MG 4 1_555 B O ASN 52 B ASN 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc4 A O ASN 52 A ASN 447 1_555 G MG MG . B MG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc5 F MG MG . B MG 1 1_555 B OD1 ASP 68 B ASP 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.841 ? metalc ? metalc6 F MG MG . B MG 1 1_555 B OD2 ASP 68 B ASP 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.96 ? metalc ? metalc7 F MG MG . B MG 1 1_555 B OE2 GLU 139 B GLU 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? metalc ? metalc8 G MG MG . B MG 5 1_555 B OD2 ASP 44 B ASP 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc9 I MG MG . C MG 7 1_555 C OD2 ASP 44 C ASP 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? metalc ? metalc10 I MG MG . C MG 7 1_555 D O ASN 52 D ASN 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc11 C O ASN 52 C ASN 447 1_555 K MG MG . D MG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc12 J MG MG . D MG 3 1_555 D OD1 ASP 68 D ASP 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc13 J MG MG . D MG 3 1_555 D OD2 ASP 68 D ASP 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc14 J MG MG . D MG 3 1_555 D OD1 ASN 141 D ASN 536 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.852 ? metalc ? metalc15 K MG MG . D MG 6 1_555 D OD2 ASP 44 D ASP 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc16 K MG MG . D MG 6 1_555 D OE2 GLU 223 D GLU 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.798 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3N4P _atom_sites.fract_transf_matrix[1][1] 0.012069 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011369 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005308 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 4 4 MG MG . F 2 MG B 1 1 1 MG MG . G 2 MG B 1 5 5 MG MG . H 2 MG C 1 2 2 MG MG . I 2 MG C 1 7 7 MG MG . J 2 MG D 1 3 3 MG MG . K 2 MG D 1 6 6 MG MG . L 3 HOH A 1 1 1 HOH HOH . L 3 HOH A 2 2 2 HOH HOH . L 3 HOH A 3 10 10 HOH HOH . L 3 HOH A 4 12 12 HOH HOH . L 3 HOH A 5 13 13 HOH HOH . L 3 HOH A 6 14 14 HOH HOH . L 3 HOH A 7 15 15 HOH HOH . L 3 HOH A 8 16 16 HOH HOH . L 3 HOH A 9 17 17 HOH HOH . L 3 HOH A 10 24 24 HOH HOH . L 3 HOH A 11 27 27 HOH HOH . L 3 HOH A 12 30 30 HOH HOH . L 3 HOH A 13 31 31 HOH HOH . L 3 HOH A 14 38 38 HOH HOH . L 3 HOH A 15 45 45 HOH HOH . L 3 HOH A 16 48 48 HOH HOH . L 3 HOH A 17 49 49 HOH HOH . L 3 HOH A 18 50 50 HOH HOH . L 3 HOH A 19 51 51 HOH HOH . L 3 HOH A 20 52 52 HOH HOH . L 3 HOH A 21 53 53 HOH HOH . L 3 HOH A 22 54 54 HOH HOH . L 3 HOH A 23 58 58 HOH HOH . L 3 HOH A 24 59 59 HOH HOH . L 3 HOH A 25 60 60 HOH HOH . L 3 HOH A 26 61 61 HOH HOH . L 3 HOH A 27 75 75 HOH HOH . L 3 HOH A 28 76 76 HOH HOH . L 3 HOH A 29 77 77 HOH HOH . L 3 HOH A 30 79 79 HOH HOH . L 3 HOH A 31 82 82 HOH HOH . L 3 HOH A 32 88 88 HOH HOH . L 3 HOH A 33 89 89 HOH HOH . L 3 HOH A 34 95 95 HOH HOH . L 3 HOH A 35 97 97 HOH HOH . M 3 HOH B 1 3 3 HOH HOH . M 3 HOH B 2 4 4 HOH HOH . M 3 HOH B 3 18 18 HOH HOH . M 3 HOH B 4 19 19 HOH HOH . M 3 HOH B 5 26 26 HOH HOH . M 3 HOH B 6 28 28 HOH HOH . M 3 HOH B 7 33 33 HOH HOH . M 3 HOH B 8 39 39 HOH HOH . M 3 HOH B 9 40 40 HOH HOH . M 3 HOH B 10 41 41 HOH HOH . M 3 HOH B 11 44 44 HOH HOH . M 3 HOH B 12 46 46 HOH HOH . M 3 HOH B 13 47 47 HOH HOH . M 3 HOH B 14 57 57 HOH HOH . M 3 HOH B 15 62 62 HOH HOH . M 3 HOH B 16 63 63 HOH HOH . M 3 HOH B 17 64 64 HOH HOH . M 3 HOH B 18 65 65 HOH HOH . M 3 HOH B 19 78 78 HOH HOH . M 3 HOH B 20 81 81 HOH HOH . M 3 HOH B 21 83 83 HOH HOH . M 3 HOH B 22 90 90 HOH HOH . M 3 HOH B 23 91 91 HOH HOH . M 3 HOH B 24 92 92 HOH HOH . M 3 HOH B 25 93 93 HOH HOH . N 3 HOH C 1 5 5 HOH HOH . N 3 HOH C 2 6 6 HOH HOH . N 3 HOH C 3 8 8 HOH HOH . N 3 HOH C 4 9 9 HOH HOH . N 3 HOH C 5 11 11 HOH HOH . N 3 HOH C 6 20 20 HOH HOH . N 3 HOH C 7 21 21 HOH HOH . N 3 HOH C 8 22 22 HOH HOH . N 3 HOH C 9 23 23 HOH HOH . N 3 HOH C 10 25 25 HOH HOH . N 3 HOH C 11 32 32 HOH HOH . N 3 HOH C 12 35 35 HOH HOH . N 3 HOH C 13 37 37 HOH HOH . N 3 HOH C 14 66 66 HOH HOH . N 3 HOH C 15 68 68 HOH HOH . N 3 HOH C 16 69 69 HOH HOH . N 3 HOH C 17 70 70 HOH HOH . N 3 HOH C 18 71 71 HOH HOH . N 3 HOH C 19 72 72 HOH HOH . N 3 HOH C 20 80 80 HOH HOH . N 3 HOH C 21 84 84 HOH HOH . N 3 HOH C 22 85 85 HOH HOH . N 3 HOH C 23 86 86 HOH HOH . N 3 HOH C 24 94 94 HOH HOH . N 3 HOH C 25 96 96 HOH HOH . N 3 HOH C 26 98 98 HOH HOH . N 3 HOH C 27 675 7 HOH HOH . O 3 HOH D 1 29 29 HOH HOH . O 3 HOH D 2 34 34 HOH HOH . O 3 HOH D 3 36 36 HOH HOH . O 3 HOH D 4 42 42 HOH HOH . O 3 HOH D 5 43 43 HOH HOH . O 3 HOH D 6 55 55 HOH HOH . O 3 HOH D 7 56 56 HOH HOH . O 3 HOH D 8 67 67 HOH HOH . O 3 HOH D 9 73 73 HOH HOH . O 3 HOH D 10 74 74 HOH HOH . O 3 HOH D 11 87 87 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x 58.834 _atom_site.Cartn_y 37.148 _atom_site.Cartn_z 18.14 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 96.2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 5 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 1 #