data_3N4S # _model_server_result.job_id guzyzxXSSdDSXWqXy2mZhA _model_server_result.datetime_utc '2024-12-20 07:06:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3n4s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":5}' # _entry.id 3N4S # _exptl.entry_id 3N4S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3N4S _cell.length_a 69.975 _cell.length_b 134.044 _cell.length_c 54.419 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3N4S _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,O,P 1 1 C,D,H,I,J,K,L,M,N,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 3N4S _atom_sites.fract_transf_matrix[1][1] 0.014291 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00746 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018376 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 1PE B 1 6 6 1PE 1PE . F 2 1PE B 1 7 7 1PE 1PE . G 2 1PE B 1 9 9 1PE 1PE . H 2 1PE C 1 2 2 1PE 1PE . I 2 1PE C 1 10 10 1PE 1PE . J 2 1PE D 1 1 1 1PE 1PE . K 2 1PE D 1 3 3 1PE 1PE . L 2 1PE D 1 4 4 1PE 1PE . M 2 1PE D 1 5 5 1PE 1PE . N 2 1PE D 1 8 8 1PE 1PE . O 3 HOH A 1 4 4 HOH HOH . O 3 HOH A 2 6 6 HOH HOH . O 3 HOH A 3 16 16 HOH HOH . O 3 HOH A 4 19 19 HOH HOH . O 3 HOH A 5 20 20 HOH HOH . O 3 HOH A 6 21 21 HOH HOH . O 3 HOH A 7 25 25 HOH HOH . O 3 HOH A 8 27 27 HOH HOH . O 3 HOH A 9 28 28 HOH HOH . O 3 HOH A 10 33 33 HOH HOH . O 3 HOH A 11 39 39 HOH HOH . O 3 HOH A 12 42 42 HOH HOH . O 3 HOH A 13 44 44 HOH HOH . O 3 HOH A 14 58 58 HOH HOH . O 3 HOH A 15 59 59 HOH HOH . O 3 HOH A 16 60 60 HOH HOH . O 3 HOH A 17 182 67 HOH HOH . O 3 HOH A 18 183 75 HOH HOH . O 3 HOH A 19 184 82 HOH HOH . O 3 HOH A 20 185 83 HOH HOH . O 3 HOH A 21 186 84 HOH HOH . O 3 HOH A 22 187 89 HOH HOH . O 3 HOH A 23 188 80 HOH HOH . O 3 HOH A 24 189 92 HOH HOH . O 3 HOH A 25 190 93 HOH HOH . O 3 HOH A 26 191 94 HOH HOH . O 3 HOH A 27 192 97 HOH HOH . O 3 HOH A 28 193 98 HOH HOH . O 3 HOH A 29 194 101 HOH HOH . O 3 HOH A 30 195 102 HOH HOH . O 3 HOH A 31 196 107 HOH HOH . O 3 HOH A 32 197 115 HOH HOH . O 3 HOH A 33 198 118 HOH HOH . O 3 HOH A 34 199 121 HOH HOH . O 3 HOH A 35 200 123 HOH HOH . O 3 HOH A 36 201 126 HOH HOH . O 3 HOH A 37 202 143 HOH HOH . P 3 HOH B 1 1 1 HOH HOH . P 3 HOH B 2 10 10 HOH HOH . P 3 HOH B 3 11 11 HOH HOH . P 3 HOH B 4 17 17 HOH HOH . P 3 HOH B 5 18 18 HOH HOH . P 3 HOH B 6 22 22 HOH HOH . P 3 HOH B 7 29 29 HOH HOH . P 3 HOH B 8 30 30 HOH HOH . P 3 HOH B 9 35 35 HOH HOH . P 3 HOH B 10 36 36 HOH HOH . P 3 HOH B 11 37 37 HOH HOH . P 3 HOH B 12 41 41 HOH HOH . P 3 HOH B 13 45 45 HOH HOH . P 3 HOH B 14 47 47 HOH HOH . P 3 HOH B 15 49 49 HOH HOH . P 3 HOH B 16 57 57 HOH HOH . P 3 HOH B 17 61 61 HOH HOH . P 3 HOH B 18 63 63 HOH HOH . P 3 HOH B 19 64 64 HOH HOH . P 3 HOH B 20 182 66 HOH HOH . P 3 HOH B 21 183 68 HOH HOH . P 3 HOH B 22 184 69 HOH HOH . P 3 HOH B 23 186 72 HOH HOH . P 3 HOH B 24 187 74 HOH HOH . P 3 HOH B 25 188 77 HOH HOH . P 3 HOH B 26 189 78 HOH HOH . P 3 HOH B 27 190 79 HOH HOH . P 3 HOH B 28 191 81 HOH HOH . P 3 HOH B 29 192 85 HOH HOH . P 3 HOH B 30 193 86 HOH HOH . P 3 HOH B 31 194 87 HOH HOH . P 3 HOH B 32 195 88 HOH HOH . P 3 HOH B 33 196 104 HOH HOH . P 3 HOH B 34 197 113 HOH HOH . P 3 HOH B 35 198 114 HOH HOH . P 3 HOH B 36 199 117 HOH HOH . P 3 HOH B 37 200 129 HOH HOH . P 3 HOH B 38 201 130 HOH HOH . P 3 HOH B 39 202 139 HOH HOH . P 3 HOH B 40 203 142 HOH HOH . P 3 HOH B 41 204 144 HOH HOH . P 3 HOH B 42 205 146 HOH HOH . P 3 HOH B 43 206 150 HOH HOH . P 3 HOH B 44 207 156 HOH HOH . P 3 HOH B 45 208 157 HOH HOH . P 3 HOH B 46 209 158 HOH HOH . P 3 HOH B 47 210 159 HOH HOH . P 3 HOH B 48 211 165 HOH HOH . Q 3 HOH C 1 3 3 HOH HOH . Q 3 HOH C 2 7 7 HOH HOH . Q 3 HOH C 3 8 8 HOH HOH . Q 3 HOH C 4 9 9 HOH HOH . Q 3 HOH C 5 15 15 HOH HOH . Q 3 HOH C 6 48 48 HOH HOH . Q 3 HOH C 7 52 52 HOH HOH . Q 3 HOH C 8 182 70 HOH HOH . Q 3 HOH C 9 184 95 HOH HOH . Q 3 HOH C 10 185 96 HOH HOH . Q 3 HOH C 11 186 99 HOH HOH . Q 3 HOH C 12 187 105 HOH HOH . Q 3 HOH C 13 188 91 HOH HOH . Q 3 HOH C 14 189 108 HOH HOH . Q 3 HOH C 15 190 112 HOH HOH . Q 3 HOH C 16 191 116 HOH HOH . Q 3 HOH C 17 192 119 HOH HOH . Q 3 HOH C 18 193 131 HOH HOH . Q 3 HOH C 19 194 132 HOH HOH . Q 3 HOH C 20 195 135 HOH HOH . Q 3 HOH C 21 196 137 HOH HOH . Q 3 HOH C 22 197 138 HOH HOH . Q 3 HOH C 23 198 140 HOH HOH . Q 3 HOH C 24 199 141 HOH HOH . Q 3 HOH C 25 200 161 HOH HOH . Q 3 HOH C 26 201 162 HOH HOH . Q 3 HOH C 27 202 106 HOH HOH . R 3 HOH D 1 2 2 HOH HOH . R 3 HOH D 2 12 12 HOH HOH . R 3 HOH D 3 13 13 HOH HOH . R 3 HOH D 4 14 14 HOH HOH . R 3 HOH D 5 23 23 HOH HOH . R 3 HOH D 6 24 24 HOH HOH . R 3 HOH D 7 26 26 HOH HOH . R 3 HOH D 8 31 31 HOH HOH . R 3 HOH D 9 32 32 HOH HOH . R 3 HOH D 10 34 34 HOH HOH . R 3 HOH D 11 38 38 HOH HOH . R 3 HOH D 12 40 40 HOH HOH . R 3 HOH D 13 43 43 HOH HOH . R 3 HOH D 14 46 46 HOH HOH . R 3 HOH D 15 50 50 HOH HOH . R 3 HOH D 16 51 51 HOH HOH . R 3 HOH D 17 53 53 HOH HOH . R 3 HOH D 18 54 54 HOH HOH . R 3 HOH D 19 55 55 HOH HOH . R 3 HOH D 20 56 56 HOH HOH . R 3 HOH D 21 62 62 HOH HOH . R 3 HOH D 22 65 65 HOH HOH . R 3 HOH D 23 182 5 HOH HOH . R 3 HOH D 24 183 73 HOH HOH . R 3 HOH D 25 184 76 HOH HOH . R 3 HOH D 26 185 71 HOH HOH . R 3 HOH D 27 186 100 HOH HOH . R 3 HOH D 28 187 103 HOH HOH . R 3 HOH D 29 188 109 HOH HOH . R 3 HOH D 30 189 110 HOH HOH . R 3 HOH D 31 190 111 HOH HOH . R 3 HOH D 32 191 120 HOH HOH . R 3 HOH D 33 192 122 HOH HOH . R 3 HOH D 34 193 124 HOH HOH . R 3 HOH D 35 194 125 HOH HOH . R 3 HOH D 36 195 127 HOH HOH . R 3 HOH D 37 196 128 HOH HOH . R 3 HOH D 38 197 133 HOH HOH . R 3 HOH D 39 198 134 HOH HOH . R 3 HOH D 40 199 136 HOH HOH . R 3 HOH D 41 200 145 HOH HOH . R 3 HOH D 42 201 147 HOH HOH . R 3 HOH D 43 202 148 HOH HOH . R 3 HOH D 44 203 149 HOH HOH . R 3 HOH D 45 204 151 HOH HOH . R 3 HOH D 46 205 152 HOH HOH . R 3 HOH D 47 206 153 HOH HOH . R 3 HOH D 48 207 154 HOH HOH . R 3 HOH D 49 208 155 HOH HOH . R 3 HOH D 50 209 160 HOH HOH . R 3 HOH D 51 210 163 HOH HOH . R 3 HOH D 52 211 164 HOH HOH . R 3 HOH D 53 212 90 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . M 2 8.651 0.626 0.799 1 79.51 ? OH2 1PE 5 D 1 HETATM 2 C C12 1PE . . . M 2 9.117 1.64 1.645 1 77.73 ? C12 1PE 5 D 1 HETATM 3 C C22 1PE . . . M 2 8.509 3.033 1.47 1 79.6 ? C22 1PE 5 D 1 HETATM 4 O OH3 1PE . . . M 2 9.335 4.162 1.586 1 81.31 ? OH3 1PE 5 D 1 HETATM 5 C C13 1PE . . . M 2 10.107 5.628 -0.302 1 59.13 ? C13 1PE 5 D 1 HETATM 6 C C23 1PE . . . M 2 9.087 5.284 0.784 1 68.5 ? C23 1PE 5 D 1 HETATM 7 O OH4 1PE . . . M 2 9.651 6.063 -1.555 1 62.27 ? OH4 1PE 5 D 1 HETATM 8 C C14 1PE . . . M 2 8.463 5.259 -3.616 1 51.13 ? C14 1PE 5 D 1 HETATM 9 C C24 1PE . . . M 2 9.632 5.172 -2.636 1 57.38 ? C24 1PE 5 D 1 HETATM 10 O OH5 1PE . . . M 2 7.722 4.094 -3.861 1 55.77 ? OH5 1PE 5 D 1 HETATM 11 C C15 1PE . . . M 2 8.572 1.752 -3.86 1 64.78 ? C15 1PE 5 D 1 HETATM 12 C C25 1PE . . . M 2 8.245 3.037 -4.616 1 52.51 ? C25 1PE 5 D 1 HETATM 13 O OH6 1PE . . . M 2 7.554 0.81 -3.665 1 72.33 ? OH6 1PE 5 D 1 HETATM 14 C C16 1PE . . . M 2 9.169 -0.745 -2.567 1 81.53 ? C16 1PE 5 D 1 HETATM 15 C C26 1PE . . . M 2 7.752 -0.192 -2.709 1 77.22 ? C26 1PE 5 D 1 HETATM 16 O OH7 1PE . . . M 2 9.711 -0.817 -1.276 1 81.7 ? OH7 1PE 5 D 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #