data_3N51 # _model_server_result.job_id xcGudQgY1pjk6w_uwb7vEA _model_server_result.datetime_utc '2024-11-16 04:32:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3n51 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":706}' # _entry.id 3N51 # _exptl.entry_id 3N51 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.88 _cell.angle_gamma 90 _cell.entry_id 3N51 _cell.length_a 47.523 _cell.length_b 72.754 _cell.length_c 66.024 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3N51 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 148 n n C1 C2 EDO sing 149 n n C1 H11 EDO sing 150 n n C1 H12 EDO sing 151 n n O1 HO1 EDO sing 152 n n C2 O2 EDO sing 153 n n C2 H21 EDO sing 154 n n C2 H22 EDO sing 155 n n O2 HO2 EDO sing 156 n n # _atom_sites.entry_id 3N51 _atom_sites.fract_transf_matrix[1][1] 0.021042 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003289 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013745 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01533 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BK3 A 1 701 701 BK3 BK3 . C 3 DMS A 1 705 705 DMS DMS . D 4 EDO A 1 706 706 EDO EDO . E 5 HOH A 1 801 801 HOH HOH . E 5 HOH A 2 802 802 HOH HOH . E 5 HOH A 3 803 803 HOH HOH . E 5 HOH A 4 804 804 HOH HOH . E 5 HOH A 5 805 805 HOH HOH . E 5 HOH A 6 806 806 HOH HOH . E 5 HOH A 7 807 807 HOH HOH . E 5 HOH A 8 808 808 HOH HOH . E 5 HOH A 9 809 809 HOH HOH . E 5 HOH A 10 810 810 HOH HOH . E 5 HOH A 11 811 811 HOH HOH . E 5 HOH A 12 812 812 HOH HOH . E 5 HOH A 13 813 813 HOH HOH . E 5 HOH A 14 814 814 HOH HOH . E 5 HOH A 15 815 815 HOH HOH . E 5 HOH A 16 816 816 HOH HOH . E 5 HOH A 17 817 817 HOH HOH . E 5 HOH A 18 818 818 HOH HOH . E 5 HOH A 19 819 819 HOH HOH . E 5 HOH A 20 820 820 HOH HOH . E 5 HOH A 21 821 821 HOH HOH . E 5 HOH A 22 822 822 HOH HOH . E 5 HOH A 23 823 823 HOH HOH . E 5 HOH A 24 824 824 HOH HOH . E 5 HOH A 25 825 825 HOH HOH . E 5 HOH A 26 826 826 HOH HOH . E 5 HOH A 27 827 827 HOH HOH . E 5 HOH A 28 828 828 HOH HOH . E 5 HOH A 29 829 829 HOH HOH . E 5 HOH A 30 830 830 HOH HOH . E 5 HOH A 31 831 831 HOH HOH . E 5 HOH A 32 832 832 HOH HOH . E 5 HOH A 33 833 833 HOH HOH . E 5 HOH A 34 834 834 HOH HOH . E 5 HOH A 35 835 835 HOH HOH . E 5 HOH A 36 836 836 HOH HOH . E 5 HOH A 37 837 837 HOH HOH . E 5 HOH A 38 838 838 HOH HOH . E 5 HOH A 39 839 839 HOH HOH . E 5 HOH A 40 840 840 HOH HOH . E 5 HOH A 41 841 841 HOH HOH . E 5 HOH A 42 842 842 HOH HOH . E 5 HOH A 43 843 843 HOH HOH . E 5 HOH A 44 844 844 HOH HOH . E 5 HOH A 45 845 845 HOH HOH . E 5 HOH A 46 846 846 HOH HOH . E 5 HOH A 47 847 847 HOH HOH . E 5 HOH A 48 848 848 HOH HOH . E 5 HOH A 49 849 849 HOH HOH . E 5 HOH A 50 850 850 HOH HOH . E 5 HOH A 51 851 851 HOH HOH . E 5 HOH A 52 852 852 HOH HOH . E 5 HOH A 53 853 853 HOH HOH . E 5 HOH A 54 854 854 HOH HOH . E 5 HOH A 55 855 855 HOH HOH . E 5 HOH A 56 856 856 HOH HOH . E 5 HOH A 57 857 857 HOH HOH . E 5 HOH A 58 858 858 HOH HOH . E 5 HOH A 59 859 859 HOH HOH . E 5 HOH A 60 860 860 HOH HOH . E 5 HOH A 61 861 861 HOH HOH . E 5 HOH A 62 862 862 HOH HOH . E 5 HOH A 63 863 863 HOH HOH . E 5 HOH A 64 864 864 HOH HOH . E 5 HOH A 65 865 865 HOH HOH . E 5 HOH A 66 866 866 HOH HOH . E 5 HOH A 67 867 867 HOH HOH . E 5 HOH A 68 868 868 HOH HOH . E 5 HOH A 69 869 869 HOH HOH . E 5 HOH A 70 870 870 HOH HOH . E 5 HOH A 71 871 871 HOH HOH . E 5 HOH A 72 872 872 HOH HOH . E 5 HOH A 73 873 873 HOH HOH . E 5 HOH A 74 874 874 HOH HOH . E 5 HOH A 75 875 875 HOH HOH . E 5 HOH A 76 876 876 HOH HOH . E 5 HOH A 77 877 877 HOH HOH . E 5 HOH A 78 878 878 HOH HOH . E 5 HOH A 79 879 879 HOH HOH . E 5 HOH A 80 880 880 HOH HOH . E 5 HOH A 81 881 881 HOH HOH . E 5 HOH A 82 882 882 HOH HOH . E 5 HOH A 83 883 883 HOH HOH . E 5 HOH A 84 884 884 HOH HOH . E 5 HOH A 85 885 885 HOH HOH . E 5 HOH A 86 886 886 HOH HOH . E 5 HOH A 87 887 887 HOH HOH . E 5 HOH A 88 888 888 HOH HOH . E 5 HOH A 89 889 889 HOH HOH . E 5 HOH A 90 890 890 HOH HOH . E 5 HOH A 91 891 891 HOH HOH . E 5 HOH A 92 892 892 HOH HOH . E 5 HOH A 93 893 893 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 6.746 4.936 50.099 1 45.74 ? C1 EDO 706 A 1 HETATM 2 O O1 EDO . . . D 4 7.898 4.241 49.608 1 50.68 ? O1 EDO 706 A 1 HETATM 3 C C2 EDO . . . D 4 5.89 3.998 50.937 1 49.31 ? C2 EDO 706 A 1 HETATM 4 O O2 EDO . . . D 4 4.57 4.538 50.976 1 53.41 ? O2 EDO 706 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #