data_3N8R # _model_server_result.job_id GoPY4rJ4I5HOUdZJBwVj3Q _model_server_result.datetime_utc '2024-11-02 10:20:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3n8r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3N8R # _exptl.entry_id 3N8R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3N8R _cell.length_a 49.631 _cell.length_b 67.856 _cell.length_c 75.39 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3N8R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 42 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 84 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C _struct_conn.ptnr2_label_comp_id CB9 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CB9 _struct_conn.ptnr2_auth_seq_id 308 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.36 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 307 n n P O2 PO4 sing 308 n n P O3 PO4 sing 309 n n P O4 PO4 sing 310 n n # _atom_sites.entry_id 3N8R _atom_sites.fract_transf_matrix[1][1] 0.020149 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014737 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013264 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 1 1 PO4 PO4 . C 3 CB9 A 1 308 1 CB9 PNM . D 4 HOH A 1 2 2 HOH HOH . D 4 HOH A 2 3 3 HOH HOH . D 4 HOH A 3 4 4 HOH HOH . D 4 HOH A 4 5 5 HOH HOH . D 4 HOH A 5 6 6 HOH HOH . D 4 HOH A 6 7 7 HOH HOH . D 4 HOH A 7 8 8 HOH HOH . D 4 HOH A 8 9 9 HOH HOH . D 4 HOH A 9 10 10 HOH HOH . D 4 HOH A 10 11 11 HOH HOH . D 4 HOH A 11 12 12 HOH HOH . D 4 HOH A 12 13 13 HOH HOH . D 4 HOH A 13 14 14 HOH HOH . D 4 HOH A 14 15 15 HOH HOH . D 4 HOH A 15 16 16 HOH HOH . D 4 HOH A 16 17 17 HOH HOH . D 4 HOH A 17 18 18 HOH HOH . D 4 HOH A 18 19 19 HOH HOH . D 4 HOH A 19 20 20 HOH HOH . D 4 HOH A 20 21 21 HOH HOH . D 4 HOH A 21 22 22 HOH HOH . D 4 HOH A 22 23 23 HOH HOH . D 4 HOH A 23 24 24 HOH HOH . D 4 HOH A 24 25 25 HOH HOH . D 4 HOH A 25 26 26 HOH HOH . D 4 HOH A 26 27 27 HOH HOH . D 4 HOH A 27 28 28 HOH HOH . D 4 HOH A 28 29 29 HOH HOH . D 4 HOH A 29 30 30 HOH HOH . D 4 HOH A 30 31 31 HOH HOH . D 4 HOH A 31 32 32 HOH HOH . D 4 HOH A 32 33 33 HOH HOH . D 4 HOH A 33 34 34 HOH HOH . D 4 HOH A 34 35 35 HOH HOH . D 4 HOH A 35 36 36 HOH HOH . D 4 HOH A 36 37 37 HOH HOH . D 4 HOH A 37 38 38 HOH HOH . D 4 HOH A 38 39 39 HOH HOH . D 4 HOH A 39 40 40 HOH HOH . D 4 HOH A 40 41 41 HOH HOH . D 4 HOH A 41 42 42 HOH HOH . D 4 HOH A 42 309 1 HOH HOH . D 4 HOH A 43 310 43 HOH HOH . D 4 HOH A 44 311 44 HOH HOH . D 4 HOH A 45 312 45 HOH HOH . D 4 HOH A 46 313 46 HOH HOH . D 4 HOH A 47 314 47 HOH HOH . D 4 HOH A 48 315 48 HOH HOH . D 4 HOH A 49 316 49 HOH HOH . D 4 HOH A 50 317 50 HOH HOH . D 4 HOH A 51 318 51 HOH HOH . D 4 HOH A 52 319 52 HOH HOH . D 4 HOH A 53 320 53 HOH HOH . D 4 HOH A 54 321 54 HOH HOH . D 4 HOH A 55 322 55 HOH HOH . D 4 HOH A 56 323 56 HOH HOH . D 4 HOH A 57 324 57 HOH HOH . D 4 HOH A 58 325 58 HOH HOH . D 4 HOH A 59 326 59 HOH HOH . D 4 HOH A 60 327 60 HOH HOH . D 4 HOH A 61 328 61 HOH HOH . D 4 HOH A 62 329 62 HOH HOH . D 4 HOH A 63 330 63 HOH HOH . D 4 HOH A 64 331 64 HOH HOH . D 4 HOH A 65 332 65 HOH HOH . D 4 HOH A 66 333 66 HOH HOH . D 4 HOH A 67 334 67 HOH HOH . D 4 HOH A 68 335 68 HOH HOH . D 4 HOH A 69 336 69 HOH HOH . D 4 HOH A 70 337 70 HOH HOH . D 4 HOH A 71 338 71 HOH HOH . D 4 HOH A 72 339 72 HOH HOH . D 4 HOH A 73 340 73 HOH HOH . D 4 HOH A 74 341 74 HOH HOH . D 4 HOH A 75 342 75 HOH HOH . D 4 HOH A 76 343 76 HOH HOH . D 4 HOH A 77 344 77 HOH HOH . D 4 HOH A 78 345 78 HOH HOH . D 4 HOH A 79 346 79 HOH HOH . D 4 HOH A 80 347 80 HOH HOH . D 4 HOH A 81 348 81 HOH HOH . D 4 HOH A 82 349 82 HOH HOH . D 4 HOH A 83 350 83 HOH HOH . D 4 HOH A 84 351 84 HOH HOH . D 4 HOH A 85 352 85 HOH HOH . D 4 HOH A 86 353 86 HOH HOH . D 4 HOH A 87 354 87 HOH HOH . D 4 HOH A 88 355 88 HOH HOH . D 4 HOH A 89 356 89 HOH HOH . D 4 HOH A 90 357 90 HOH HOH . D 4 HOH A 91 358 91 HOH HOH . D 4 HOH A 92 359 92 HOH HOH . D 4 HOH A 93 360 93 HOH HOH . D 4 HOH A 94 361 94 HOH HOH . D 4 HOH A 95 362 95 HOH HOH . D 4 HOH A 96 363 96 HOH HOH . D 4 HOH A 97 364 97 HOH HOH . D 4 HOH A 98 365 98 HOH HOH . D 4 HOH A 99 366 99 HOH HOH . D 4 HOH A 100 367 100 HOH HOH . D 4 HOH A 101 368 101 HOH HOH . D 4 HOH A 102 369 102 HOH HOH . D 4 HOH A 103 370 103 HOH HOH . D 4 HOH A 104 371 104 HOH HOH . D 4 HOH A 105 372 105 HOH HOH . D 4 HOH A 106 373 106 HOH HOH . D 4 HOH A 107 374 107 HOH HOH . D 4 HOH A 108 375 108 HOH HOH . D 4 HOH A 109 376 109 HOH HOH . D 4 HOH A 110 377 110 HOH HOH . D 4 HOH A 111 378 111 HOH HOH . D 4 HOH A 112 379 112 HOH HOH . D 4 HOH A 113 380 113 HOH HOH . D 4 HOH A 114 381 114 HOH HOH . D 4 HOH A 115 382 116 HOH HOH . D 4 HOH A 116 383 117 HOH HOH . D 4 HOH A 117 384 118 HOH HOH . D 4 HOH A 118 385 119 HOH HOH . D 4 HOH A 119 386 120 HOH HOH . D 4 HOH A 120 387 121 HOH HOH . D 4 HOH A 121 388 122 HOH HOH . D 4 HOH A 122 389 123 HOH HOH . D 4 HOH A 123 390 124 HOH HOH . D 4 HOH A 124 391 125 HOH HOH . D 4 HOH A 125 392 126 HOH HOH . D 4 HOH A 126 393 127 HOH HOH . D 4 HOH A 127 394 128 HOH HOH . D 4 HOH A 128 395 129 HOH HOH . D 4 HOH A 129 396 131 HOH HOH . D 4 HOH A 130 397 132 HOH HOH . D 4 HOH A 131 398 133 HOH HOH . D 4 HOH A 132 399 134 HOH HOH . D 4 HOH A 133 400 135 HOH HOH . D 4 HOH A 134 401 136 HOH HOH . D 4 HOH A 135 402 137 HOH HOH . D 4 HOH A 136 403 138 HOH HOH . D 4 HOH A 137 404 139 HOH HOH . D 4 HOH A 138 405 140 HOH HOH . D 4 HOH A 139 406 141 HOH HOH . D 4 HOH A 140 407 142 HOH HOH . D 4 HOH A 141 408 143 HOH HOH . D 4 HOH A 142 409 144 HOH HOH . D 4 HOH A 143 410 145 HOH HOH . D 4 HOH A 144 411 146 HOH HOH . D 4 HOH A 145 412 147 HOH HOH . D 4 HOH A 146 413 149 HOH HOH . D 4 HOH A 147 414 150 HOH HOH . D 4 HOH A 148 415 151 HOH HOH . D 4 HOH A 149 416 152 HOH HOH . D 4 HOH A 150 417 153 HOH HOH . D 4 HOH A 151 418 154 HOH HOH . D 4 HOH A 152 419 155 HOH HOH . D 4 HOH A 153 420 156 HOH HOH . D 4 HOH A 154 421 157 HOH HOH . D 4 HOH A 155 422 158 HOH HOH . D 4 HOH A 156 423 159 HOH HOH . D 4 HOH A 157 424 160 HOH HOH . D 4 HOH A 158 425 161 HOH HOH . D 4 HOH A 159 426 162 HOH HOH . D 4 HOH A 160 427 163 HOH HOH . D 4 HOH A 161 428 164 HOH HOH . D 4 HOH A 162 429 165 HOH HOH . D 4 HOH A 163 430 166 HOH HOH . D 4 HOH A 164 431 168 HOH HOH . D 4 HOH A 165 432 169 HOH HOH . D 4 HOH A 166 433 170 HOH HOH . D 4 HOH A 167 434 171 HOH HOH . D 4 HOH A 168 435 172 HOH HOH . D 4 HOH A 169 436 173 HOH HOH . D 4 HOH A 170 437 174 HOH HOH . D 4 HOH A 171 438 175 HOH HOH . D 4 HOH A 172 439 176 HOH HOH . D 4 HOH A 173 440 177 HOH HOH . D 4 HOH A 174 441 178 HOH HOH . D 4 HOH A 175 442 179 HOH HOH . D 4 HOH A 176 443 180 HOH HOH . D 4 HOH A 177 444 181 HOH HOH . D 4 HOH A 178 445 182 HOH HOH . D 4 HOH A 179 446 183 HOH HOH . D 4 HOH A 180 447 184 HOH HOH . D 4 HOH A 181 448 185 HOH HOH . D 4 HOH A 182 449 186 HOH HOH . D 4 HOH A 183 450 187 HOH HOH . D 4 HOH A 184 451 188 HOH HOH . D 4 HOH A 185 452 189 HOH HOH . D 4 HOH A 186 453 190 HOH HOH . D 4 HOH A 187 454 191 HOH HOH . D 4 HOH A 188 455 192 HOH HOH . D 4 HOH A 189 456 193 HOH HOH . D 4 HOH A 190 457 194 HOH HOH . D 4 HOH A 191 458 195 HOH HOH . D 4 HOH A 192 459 196 HOH HOH . D 4 HOH A 193 460 197 HOH HOH . D 4 HOH A 194 461 198 HOH HOH . D 4 HOH A 195 462 199 HOH HOH . D 4 HOH A 196 463 200 HOH HOH . D 4 HOH A 197 464 201 HOH HOH . D 4 HOH A 198 465 202 HOH HOH . D 4 HOH A 199 466 203 HOH HOH . D 4 HOH A 200 467 204 HOH HOH . D 4 HOH A 201 468 205 HOH HOH . D 4 HOH A 202 469 206 HOH HOH . D 4 HOH A 203 470 207 HOH HOH . D 4 HOH A 204 471 208 HOH HOH . D 4 HOH A 205 472 209 HOH HOH . D 4 HOH A 206 473 210 HOH HOH . D 4 HOH A 207 474 211 HOH HOH . D 4 HOH A 208 475 212 HOH HOH . D 4 HOH A 209 476 213 HOH HOH . D 4 HOH A 210 477 214 HOH HOH . D 4 HOH A 211 478 215 HOH HOH . D 4 HOH A 212 479 216 HOH HOH . D 4 HOH A 213 480 217 HOH HOH . D 4 HOH A 214 481 218 HOH HOH . D 4 HOH A 215 482 219 HOH HOH . D 4 HOH A 216 483 220 HOH HOH . D 4 HOH A 217 484 221 HOH HOH . D 4 HOH A 218 485 222 HOH HOH . D 4 HOH A 219 486 223 HOH HOH . D 4 HOH A 220 487 224 HOH HOH . D 4 HOH A 221 488 225 HOH HOH . D 4 HOH A 222 489 226 HOH HOH . D 4 HOH A 223 490 227 HOH HOH . D 4 HOH A 224 491 228 HOH HOH . D 4 HOH A 225 492 229 HOH HOH . D 4 HOH A 226 493 231 HOH HOH . D 4 HOH A 227 494 232 HOH HOH . D 4 HOH A 228 495 233 HOH HOH . D 4 HOH A 229 496 234 HOH HOH . D 4 HOH A 230 497 236 HOH HOH . D 4 HOH A 231 498 237 HOH HOH . D 4 HOH A 232 499 238 HOH HOH . D 4 HOH A 233 500 239 HOH HOH . D 4 HOH A 234 501 240 HOH HOH . D 4 HOH A 235 502 241 HOH HOH . D 4 HOH A 236 503 242 HOH HOH . D 4 HOH A 237 504 243 HOH HOH . D 4 HOH A 238 505 245 HOH HOH . D 4 HOH A 239 506 246 HOH HOH . D 4 HOH A 240 507 247 HOH HOH . D 4 HOH A 241 508 249 HOH HOH . D 4 HOH A 242 509 250 HOH HOH . D 4 HOH A 243 510 251 HOH HOH . D 4 HOH A 244 511 252 HOH HOH . D 4 HOH A 245 512 253 HOH HOH . D 4 HOH A 246 513 254 HOH HOH . D 4 HOH A 247 514 255 HOH HOH . D 4 HOH A 248 515 256 HOH HOH . D 4 HOH A 249 516 257 HOH HOH . D 4 HOH A 250 517 258 HOH HOH . D 4 HOH A 251 518 259 HOH HOH . D 4 HOH A 252 519 260 HOH HOH . D 4 HOH A 253 520 261 HOH HOH . D 4 HOH A 254 521 262 HOH HOH . D 4 HOH A 255 522 263 HOH HOH . D 4 HOH A 256 523 264 HOH HOH . D 4 HOH A 257 524 265 HOH HOH . D 4 HOH A 258 525 266 HOH HOH . D 4 HOH A 259 526 268 HOH HOH . D 4 HOH A 260 527 269 HOH HOH . D 4 HOH A 261 528 270 HOH HOH . D 4 HOH A 262 529 271 HOH HOH . D 4 HOH A 263 530 272 HOH HOH . D 4 HOH A 264 531 273 HOH HOH . D 4 HOH A 265 532 274 HOH HOH . D 4 HOH A 266 533 275 HOH HOH . D 4 HOH A 267 534 276 HOH HOH . D 4 HOH A 268 535 277 HOH HOH . D 4 HOH A 269 536 278 HOH HOH . D 4 HOH A 270 537 279 HOH HOH . D 4 HOH A 271 538 280 HOH HOH . D 4 HOH A 272 539 281 HOH HOH . D 4 HOH A 273 540 282 HOH HOH . D 4 HOH A 274 541 283 HOH HOH . D 4 HOH A 275 542 284 HOH HOH . D 4 HOH A 276 543 285 HOH HOH . D 4 HOH A 277 544 286 HOH HOH . D 4 HOH A 278 545 287 HOH HOH . D 4 HOH A 279 546 288 HOH HOH . D 4 HOH A 280 547 289 HOH HOH . D 4 HOH A 281 548 291 HOH HOH . D 4 HOH A 282 549 292 HOH HOH . D 4 HOH A 283 550 293 HOH HOH . D 4 HOH A 284 551 294 HOH HOH . D 4 HOH A 285 552 295 HOH HOH . D 4 HOH A 286 553 296 HOH HOH . D 4 HOH A 287 554 297 HOH HOH . D 4 HOH A 288 555 299 HOH HOH . D 4 HOH A 289 556 300 HOH HOH . D 4 HOH A 290 557 301 HOH HOH . D 4 HOH A 291 558 302 HOH HOH . D 4 HOH A 292 559 303 HOH HOH . D 4 HOH A 293 560 304 HOH HOH . D 4 HOH A 294 561 305 HOH HOH . D 4 HOH A 295 562 306 HOH HOH . D 4 HOH A 296 563 307 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 -8.788 -17.444 -1.271 1 8.89 ? P PO4 1 A 1 HETATM 2 O O1 PO4 . . . B 2 -8.654 -17.086 -2.75 1 8.56 ? O1 PO4 1 A 1 HETATM 3 O O2 PO4 . . . B 2 -10.187 -17.989 -1.047 1 9.53 ? O2 PO4 1 A 1 HETATM 4 O O3 PO4 . . . B 2 -7.707 -18.453 -0.93 1 9.67 ? O3 PO4 1 A 1 HETATM 5 O O4 PO4 . . . B 2 -8.659 -16.194 -0.413 1 11.76 ? O4 PO4 1 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #