data_3N9T # _model_server_result.job_id U9eE7y_SFfLu0uSFISVQKg _model_server_result.datetime_utc '2024-11-05 00:35:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3n9t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":293}' # _entry.id 3N9T # _exptl.entry_id 3N9T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.1 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRATE ANION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 118.35 _cell.angle_gamma 90 _cell.entry_id 3N9T _cell.length_a 107.362 _cell.length_b 38.933 _cell.length_c 82.476 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3N9T _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -39.164256 0 72.584101 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OH TYR 160 A TYR 160 1_555 D FE FE . A FE 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? metalc ? metalc2 A OH TYR 194 A TYR 194 1_555 D FE FE . A FE 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc3 A NE2 HIS 218 A HIS 218 1_555 D FE FE . A FE 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc4 A NE2 HIS 220 A HIS 220 1_555 D FE FE . A FE 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? metalc ? metalc5 D FE FE . A FE 292 1_555 C OG2 FLC . A FLC 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc6 D FE FE . A FE 292 1_555 E O HOH . A HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? # _chem_comp.formula 'C6 H5 O7 -3' _chem_comp.formula_weight 189.1 _chem_comp.id FLC _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRATE ANION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CA FLC sing 83 n n CAC OA1 FLC doub 84 n n CAC OA2 FLC sing 85 n n CA CB FLC sing 86 n n CA HA1 FLC sing 87 n n CA HA2 FLC sing 88 n n CB CBC FLC sing 89 n n CB CG FLC sing 90 n n CB OHB FLC sing 91 n n CBC OB1 FLC doub 92 n n CBC OB2 FLC sing 93 n n CG CGC FLC sing 94 n n CG HG1 FLC sing 95 n n CG HG2 FLC sing 96 n n CGC OG1 FLC doub 97 n n CGC OG2 FLC sing 98 n n OHB HOB FLC sing 99 n n # _atom_sites.entry_id 3N9T _atom_sites.fract_transf_matrix[1][1] 0.009314 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005026 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025685 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013777 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HGX A 1 300 300 HGX HGX . C 3 FLC A 1 293 293 FLC FLC . D 4 FE A 1 292 292 FE FE . E 5 HOH A 1 305 305 HOH HOH . E 5 HOH A 2 306 306 HOH HOH . E 5 HOH A 3 307 307 HOH HOH . E 5 HOH A 4 308 308 HOH HOH . E 5 HOH A 5 309 309 HOH HOH . E 5 HOH A 6 310 310 HOH HOH . E 5 HOH A 7 311 311 HOH HOH . E 5 HOH A 8 312 312 HOH HOH . E 5 HOH A 9 313 313 HOH HOH . E 5 HOH A 10 314 314 HOH HOH . E 5 HOH A 11 315 315 HOH HOH . E 5 HOH A 12 316 316 HOH HOH . E 5 HOH A 13 317 317 HOH HOH . E 5 HOH A 14 318 318 HOH HOH . E 5 HOH A 15 319 319 HOH HOH . E 5 HOH A 16 320 320 HOH HOH . E 5 HOH A 17 321 321 HOH HOH . E 5 HOH A 18 322 322 HOH HOH . E 5 HOH A 19 323 323 HOH HOH . E 5 HOH A 20 324 324 HOH HOH . E 5 HOH A 21 325 325 HOH HOH . E 5 HOH A 22 326 326 HOH HOH . E 5 HOH A 23 327 327 HOH HOH . E 5 HOH A 24 328 328 HOH HOH . E 5 HOH A 25 329 329 HOH HOH . E 5 HOH A 26 330 330 HOH HOH . E 5 HOH A 27 331 331 HOH HOH . E 5 HOH A 28 332 332 HOH HOH . E 5 HOH A 29 333 333 HOH HOH . E 5 HOH A 30 334 334 HOH HOH . E 5 HOH A 31 335 335 HOH HOH . E 5 HOH A 32 336 336 HOH HOH . E 5 HOH A 33 337 337 HOH HOH . E 5 HOH A 34 338 338 HOH HOH . E 5 HOH A 35 339 339 HOH HOH . E 5 HOH A 36 340 340 HOH HOH . E 5 HOH A 37 341 341 HOH HOH . E 5 HOH A 38 342 342 HOH HOH . E 5 HOH A 39 343 343 HOH HOH . E 5 HOH A 40 344 344 HOH HOH . E 5 HOH A 41 345 345 HOH HOH . E 5 HOH A 42 346 346 HOH HOH . E 5 HOH A 43 347 347 HOH HOH . E 5 HOH A 44 348 348 HOH HOH . E 5 HOH A 45 349 349 HOH HOH . E 5 HOH A 46 350 350 HOH HOH . E 5 HOH A 47 351 351 HOH HOH . E 5 HOH A 48 352 352 HOH HOH . E 5 HOH A 49 353 353 HOH HOH . E 5 HOH A 50 354 354 HOH HOH . E 5 HOH A 51 355 355 HOH HOH . E 5 HOH A 52 356 356 HOH HOH . E 5 HOH A 53 357 357 HOH HOH . E 5 HOH A 54 358 358 HOH HOH . E 5 HOH A 55 359 359 HOH HOH . E 5 HOH A 56 360 360 HOH HOH . E 5 HOH A 57 361 361 HOH HOH . E 5 HOH A 58 362 362 HOH HOH . E 5 HOH A 59 363 363 HOH HOH . E 5 HOH A 60 364 364 HOH HOH . E 5 HOH A 61 366 366 HOH HOH . E 5 HOH A 62 367 367 HOH HOH . E 5 HOH A 63 368 368 HOH HOH . E 5 HOH A 64 369 369 HOH HOH . E 5 HOH A 65 370 370 HOH HOH . E 5 HOH A 66 371 371 HOH HOH . E 5 HOH A 67 372 372 HOH HOH . E 5 HOH A 68 374 374 HOH HOH . E 5 HOH A 69 375 375 HOH HOH . E 5 HOH A 70 376 376 HOH HOH . E 5 HOH A 71 377 377 HOH HOH . E 5 HOH A 72 378 378 HOH HOH . E 5 HOH A 73 379 379 HOH HOH . E 5 HOH A 74 380 380 HOH HOH . E 5 HOH A 75 381 381 HOH HOH . E 5 HOH A 76 382 382 HOH HOH . E 5 HOH A 77 383 383 HOH HOH . E 5 HOH A 78 384 384 HOH HOH . E 5 HOH A 79 385 385 HOH HOH . E 5 HOH A 80 386 386 HOH HOH . E 5 HOH A 81 387 387 HOH HOH . E 5 HOH A 82 388 388 HOH HOH . E 5 HOH A 83 389 389 HOH HOH . E 5 HOH A 84 390 390 HOH HOH . E 5 HOH A 85 392 392 HOH HOH . E 5 HOH A 86 393 393 HOH HOH . E 5 HOH A 87 394 394 HOH HOH . E 5 HOH A 88 396 396 HOH HOH . E 5 HOH A 89 397 397 HOH HOH . E 5 HOH A 90 398 398 HOH HOH . E 5 HOH A 91 399 399 HOH HOH . E 5 HOH A 92 401 401 HOH HOH . E 5 HOH A 93 402 402 HOH HOH . E 5 HOH A 94 403 403 HOH HOH . E 5 HOH A 95 404 404 HOH HOH . E 5 HOH A 96 405 405 HOH HOH . E 5 HOH A 97 406 406 HOH HOH . E 5 HOH A 98 407 407 HOH HOH . E 5 HOH A 99 408 408 HOH HOH . E 5 HOH A 100 409 409 HOH HOH . E 5 HOH A 101 410 410 HOH HOH . E 5 HOH A 102 411 411 HOH HOH . E 5 HOH A 103 412 412 HOH HOH . E 5 HOH A 104 413 413 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC FLC . . . C 3 -8.701 13.486 22.385 1 66.52 ? CAC FLC 293 A 1 HETATM 2 C CA FLC . . . C 3 -8.504 14.72 21.526 1 66.33 ? CA FLC 293 A 1 HETATM 3 C CB FLC . . . C 3 -7.403 15.636 22.114 1 66.44 ? CB FLC 293 A 1 HETATM 4 C CBC FLC . . . C 3 -7.924 16.825 22.907 1 65.7 ? CBC FLC 293 A 1 HETATM 5 C CG FLC . . . C 3 -6.385 16.222 21.08 1 65.44 ? CG FLC 293 A 1 HETATM 6 C CGC FLC . . . C 3 -5.634 15.28 20.138 1 64.15 ? CGC FLC 293 A 1 HETATM 7 O OA1 FLC . . . C 3 -8.626 12.326 21.877 1 66.73 ? OA1 FLC 293 A 1 HETATM 8 O OA2 FLC . . . C 3 -8.935 13.709 23.599 1 66.34 ? OA2 FLC 293 A 1 HETATM 9 O OB1 FLC . . . C 3 -9.136 16.887 23.178 1 64.28 ? OB1 FLC 293 A 1 HETATM 10 O OB2 FLC . . . C 3 -7.103 17.687 23.333 1 67.09 ? OB2 FLC 293 A 1 HETATM 11 O OG1 FLC . . . C 3 -6.241 14.22 19.838 1 67.84 ? OG1 FLC 293 A 1 HETATM 12 O OG2 FLC . . . C 3 -4.447 15.569 19.678 1 55.88 ? OG2 FLC 293 A 1 HETATM 13 O OHB FLC . . . C 3 -6.812 14.869 23.173 1 68.17 ? OHB FLC 293 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 372 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #