data_3N9W
#
_model_server_result.job_id            sfRZMbbT1-NR6TU9aBhUdA 
_model_server_result.datetime_utc      '2024-11-26 22:44:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3n9w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":3002}' 
#
_entry.id    3N9W 
#
_exptl.entry_id    3N9W 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              76.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-1,2-PROPANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3N9W 
_cell.length_a            41.24 
_cell.length_b            81.2 
_cell.length_c            133.65 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3N9W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C3 H8 O2' 
_chem_comp.formula_weight    76.094 
_chem_comp.id                PGO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              S-1,2-PROPANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 PGO sing 237 n n 
C1 O1 PGO sing 238 n n 
C1 H11 PGO sing 239 n n 
C1 H12 PGO sing 240 n n 
C2 C3 PGO sing 241 n n 
C2 O2 PGO sing 242 n n 
C2 H2 PGO sing 243 n n 
C3 H31 PGO sing 244 n n 
C3 H32 PGO sing 245 n n 
C3 H33 PGO sing 246 n n 
O1 HO1 PGO sing 247 n n 
O2 HO2 PGO sing 248 n n 
#
_atom_sites.entry_id                     3N9W 
_atom_sites.fract_transf_matrix[1][1]    0.024248 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012315 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007482 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PGO A 1 3002 3002 PGO PGO . 
D 2 PGO A 1 3003 3003 PGO PGO . 
E 3 PGR B 1 3001 3001 PGR PGR . 
F 4 HOH A 1 4004 4004 HOH HOH . 
F 4 HOH A 2 4005 4005 HOH HOH . 
F 4 HOH A 3 4006 4006 HOH HOH . 
F 4 HOH A 4 4008 4008 HOH HOH . 
F 4 HOH A 5 4009 4009 HOH HOH . 
F 4 HOH A 6 4015 4015 HOH HOH . 
F 4 HOH A 7 4016 4016 HOH HOH . 
F 4 HOH A 8 4021 4021 HOH HOH . 
F 4 HOH A 9 4023 4023 HOH HOH . 
F 4 HOH A 10 4028 4028 HOH HOH . 
F 4 HOH A 11 4029 4029 HOH HOH . 
F 4 HOH A 12 4032 4032 HOH HOH . 
F 4 HOH A 13 4033 4033 HOH HOH . 
F 4 HOH A 14 4034 4034 HOH HOH . 
F 4 HOH A 15 4036 4036 HOH HOH . 
F 4 HOH A 16 4038 4038 HOH HOH . 
F 4 HOH A 17 4039 4039 HOH HOH . 
F 4 HOH A 18 4040 4040 HOH HOH . 
F 4 HOH A 19 4042 4042 HOH HOH . 
F 4 HOH A 20 4044 4044 HOH HOH . 
F 4 HOH A 21 4045 4045 HOH HOH . 
F 4 HOH A 22 4047 4047 HOH HOH . 
F 4 HOH A 23 4049 4049 HOH HOH . 
F 4 HOH A 24 4054 4054 HOH HOH . 
F 4 HOH A 25 4055 4055 HOH HOH . 
F 4 HOH A 26 4056 4056 HOH HOH . 
F 4 HOH A 27 4062 4062 HOH HOH . 
F 4 HOH A 28 4068 4068 HOH HOH . 
F 4 HOH A 29 4069 4069 HOH HOH . 
F 4 HOH A 30 4070 4070 HOH HOH . 
F 4 HOH A 31 4072 4072 HOH HOH . 
F 4 HOH A 32 4074 4074 HOH HOH . 
F 4 HOH A 33 4075 4075 HOH HOH . 
F 4 HOH A 34 4077 4077 HOH HOH . 
F 4 HOH A 35 4078 4078 HOH HOH . 
F 4 HOH A 36 4079 4079 HOH HOH . 
F 4 HOH A 37 4081 4081 HOH HOH . 
F 4 HOH A 38 4085 4085 HOH HOH . 
F 4 HOH A 39 4087 4087 HOH HOH . 
F 4 HOH A 40 4091 4091 HOH HOH . 
F 4 HOH A 41 4092 4092 HOH HOH . 
F 4 HOH A 42 4094 4094 HOH HOH . 
F 4 HOH A 43 4095 4095 HOH HOH . 
F 4 HOH A 44 4096 4096 HOH HOH . 
F 4 HOH A 45 4105 4105 HOH HOH . 
G 4 HOH B 1 4001 4001 HOH HOH . 
G 4 HOH B 2 4002 4002 HOH HOH . 
G 4 HOH B 3 4003 4003 HOH HOH . 
G 4 HOH B 4 4007 4007 HOH HOH . 
G 4 HOH B 5 4010 4010 HOH HOH . 
G 4 HOH B 6 4011 4011 HOH HOH . 
G 4 HOH B 7 4012 4012 HOH HOH . 
G 4 HOH B 8 4013 4013 HOH HOH . 
G 4 HOH B 9 4014 4014 HOH HOH . 
G 4 HOH B 10 4017 4017 HOH HOH . 
G 4 HOH B 11 4018 4018 HOH HOH . 
G 4 HOH B 12 4019 4019 HOH HOH . 
G 4 HOH B 13 4020 4020 HOH HOH . 
G 4 HOH B 14 4022 4022 HOH HOH . 
G 4 HOH B 15 4024 4024 HOH HOH . 
G 4 HOH B 16 4025 4025 HOH HOH . 
G 4 HOH B 17 4026 4026 HOH HOH . 
G 4 HOH B 18 4027 4027 HOH HOH . 
G 4 HOH B 19 4030 4030 HOH HOH . 
G 4 HOH B 20 4031 4031 HOH HOH . 
G 4 HOH B 21 4035 4035 HOH HOH . 
G 4 HOH B 22 4037 4037 HOH HOH . 
G 4 HOH B 23 4041 4041 HOH HOH . 
G 4 HOH B 24 4043 4043 HOH HOH . 
G 4 HOH B 25 4046 4046 HOH HOH . 
G 4 HOH B 26 4048 4048 HOH HOH . 
G 4 HOH B 27 4050 4050 HOH HOH . 
G 4 HOH B 28 4051 4051 HOH HOH . 
G 4 HOH B 29 4052 4052 HOH HOH . 
G 4 HOH B 30 4053 4053 HOH HOH . 
G 4 HOH B 31 4057 4057 HOH HOH . 
G 4 HOH B 32 4058 4058 HOH HOH . 
G 4 HOH B 33 4059 4059 HOH HOH . 
G 4 HOH B 34 4060 4060 HOH HOH . 
G 4 HOH B 35 4061 4061 HOH HOH . 
G 4 HOH B 36 4063 4063 HOH HOH . 
G 4 HOH B 37 4064 4064 HOH HOH . 
G 4 HOH B 38 4065 4065 HOH HOH . 
G 4 HOH B 39 4066 4066 HOH HOH . 
G 4 HOH B 40 4067 4067 HOH HOH . 
G 4 HOH B 41 4071 4071 HOH HOH . 
G 4 HOH B 42 4073 4073 HOH HOH . 
G 4 HOH B 43 4076 4076 HOH HOH . 
G 4 HOH B 44 4080 4080 HOH HOH . 
G 4 HOH B 45 4082 4082 HOH HOH . 
G 4 HOH B 46 4083 4083 HOH HOH . 
G 4 HOH B 47 4084 4084 HOH HOH . 
G 4 HOH B 48 4086 4086 HOH HOH . 
G 4 HOH B 49 4088 4088 HOH HOH . 
G 4 HOH B 50 4089 4089 HOH HOH . 
G 4 HOH B 51 4090 4090 HOH HOH . 
G 4 HOH B 52 4093 4093 HOH HOH . 
G 4 HOH B 53 4097 4097 HOH HOH . 
G 4 HOH B 54 4098 4098 HOH HOH . 
G 4 HOH B 55 4099 4099 HOH HOH . 
G 4 HOH B 56 4100 4100 HOH HOH . 
G 4 HOH B 57 4101 4101 HOH HOH . 
G 4 HOH B 58 4102 4102 HOH HOH . 
G 4 HOH B 59 4103 4103 HOH HOH . 
G 4 HOH B 60 4104 4104 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PGO . . . C 2 34.622 37.649 43.62 0.64 27.33 ? C1 PGO 3002 A 1 
HETATM 2 C C2 PGO . . . C 2 34.248 36.413 42.8 0.64 28.65 ? C2 PGO 3002 A 1 
HETATM 3 C C3 PGO . . . C 2 34.781 35.141 43.446 0.64 18.05 ? C3 PGO 3002 A 1 
HETATM 4 O O1 PGO . . . C 2 33.55 38.597 43.584 0.64 30.36 ? O1 PGO 3002 A 1 
HETATM 5 O O2 PGO . . . C 2 34.846 36.497 41.498 0.64 30.33 ? O2 PGO 3002 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           256 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           5 
#