data_3NAT # _model_server_result.job_id N0RUt7wV03uiy4S2LrRTBA _model_server_result.datetime_utc '2024-10-10 06:31:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nat # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":165}' # _entry.id 3NAT # _exptl.entry_id 3NAT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3NAT _cell.length_a 81.381 _cell.length_b 81.381 _cell.length_c 164.16 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NAT _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale2 A C MSE 4 A MSE 1 1_555 A N LYS 5 A LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A C THR 8 A THR 5 1_555 A N MSE 9 A MSE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale4 A C MSE 9 A MSE 6 1_555 A N LEU 10 A LEU 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 A C ALA 145 A ALA 142 1_555 A N MSE 146 A MSE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 A C MSE 146 A MSE 143 1_555 A N ILE 147 A ILE 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale7 B C ALA 3 B ALA 0 1_555 B N MSE 4 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 B C MSE 4 B MSE 1 1_555 B N LYS 5 B LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 B C THR 8 B THR 5 1_555 B N MSE 9 B MSE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale10 B C MSE 9 B MSE 6 1_555 B N LEU 10 B LEU 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale11 B C ALA 145 B ALA 142 1_555 B N MSE 146 B MSE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale12 B C MSE 146 B MSE 143 1_555 B N ILE 147 B ILE 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3NAT _atom_sites.fract_transf_matrix[1][1] 0.012288 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012288 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006092 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 165 165 ZN ZN . D 3 CIT A 1 162 165 CIT CIT . E 4 HOH A 1 163 1 HOH HOH . E 4 HOH A 2 164 5 HOH HOH . E 4 HOH A 3 166 6 HOH HOH . E 4 HOH A 4 167 7 HOH HOH . E 4 HOH A 5 168 9 HOH HOH . E 4 HOH A 6 169 10 HOH HOH . E 4 HOH A 7 170 11 HOH HOH . E 4 HOH A 8 171 12 HOH HOH . E 4 HOH A 9 172 13 HOH HOH . E 4 HOH A 10 173 14 HOH HOH . E 4 HOH A 11 174 15 HOH HOH . E 4 HOH A 12 175 18 HOH HOH . E 4 HOH A 13 176 19 HOH HOH . E 4 HOH A 14 177 20 HOH HOH . E 4 HOH A 15 178 21 HOH HOH . E 4 HOH A 16 179 22 HOH HOH . E 4 HOH A 17 180 23 HOH HOH . E 4 HOH A 18 181 24 HOH HOH . E 4 HOH A 19 182 25 HOH HOH . E 4 HOH A 20 183 26 HOH HOH . E 4 HOH A 21 184 27 HOH HOH . E 4 HOH A 22 185 28 HOH HOH . E 4 HOH A 23 186 29 HOH HOH . E 4 HOH A 24 187 30 HOH HOH . E 4 HOH A 25 188 32 HOH HOH . E 4 HOH A 26 189 33 HOH HOH . E 4 HOH A 27 190 34 HOH HOH . E 4 HOH A 28 191 35 HOH HOH . E 4 HOH A 29 192 37 HOH HOH . E 4 HOH A 30 193 38 HOH HOH . E 4 HOH A 31 194 39 HOH HOH . E 4 HOH A 32 195 40 HOH HOH . E 4 HOH A 33 196 41 HOH HOH . E 4 HOH A 34 197 42 HOH HOH . E 4 HOH A 35 198 43 HOH HOH . E 4 HOH A 36 199 44 HOH HOH . E 4 HOH A 37 200 45 HOH HOH . E 4 HOH A 38 201 46 HOH HOH . E 4 HOH A 39 202 47 HOH HOH . E 4 HOH A 40 203 48 HOH HOH . E 4 HOH A 41 204 51 HOH HOH . E 4 HOH A 42 205 52 HOH HOH . E 4 HOH A 43 206 53 HOH HOH . F 4 HOH B 1 162 2 HOH HOH . F 4 HOH B 2 163 3 HOH HOH . F 4 HOH B 3 164 4 HOH HOH . F 4 HOH B 4 165 8 HOH HOH . F 4 HOH B 5 166 16 HOH HOH . F 4 HOH B 6 167 17 HOH HOH . F 4 HOH B 7 168 31 HOH HOH . F 4 HOH B 8 169 36 HOH HOH . F 4 HOH B 9 170 49 HOH HOH . F 4 HOH B 10 171 50 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 60.131 _atom_site.Cartn_y 89.593 _atom_site.Cartn_z 90.178 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 132.58 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 165 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #