data_3NBA # _model_server_result.job_id 2TwwNTAhW0OkQepdpUugcA _model_server_result.datetime_utc '2024-11-28 03:29:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nba # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":158}' # _entry.id 3NBA # _exptl.entry_id 3NBA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3NBA _cell.length_a 115.118 _cell.length_b 115.118 _cell.length_c 133.913 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NBA _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA hexameric 6 author_and_software_defined_assembly 1 PISA hexameric 6 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,H,I,L,N 1 1,2,3 B,D,G,J,K,M,O 2 1,4,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 57.559 -99.695112 0 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 115.118 0 0 4 'crystal symmetry operation' 2_445 -y-1,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -57.559 -99.695112 0 5 'crystal symmetry operation' 3_545 -x+y,-x-1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 57.559 -99.695112 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 F MG MG . A MG 158 1_555 L O HOH . A HOH 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc2 F MG MG . A MG 158 1_555 E O1G APC . A APC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc3 F MG MG . A MG 158 1_555 E O2A APC . A APC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc4 I MG MG . C MG 158 1_555 H O1G APC . C APC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc5 I MG MG . C MG 158 1_555 H O2A APC . C APC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? metalc ? metalc6 K MG MG . D MG 158 1_555 J O2A APC . D APC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc7 K MG MG . D MG 158 1_555 J O1G APC . D APC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3NBA _atom_sites.fract_transf_matrix[1][1] 0.008687 _atom_sites.fract_transf_matrix[1][2] 0.005015 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010031 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007468 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 APC A 1 200 200 APC APC . F 3 MG A 1 158 1 MG MG . G 2 APC B 1 200 200 APC APC . H 2 APC C 1 200 200 APC APC . I 3 MG C 1 158 1 MG MG . J 2 APC D 1 200 200 APC APC . K 3 MG D 1 158 1 MG MG . L 4 HOH A 1 159 1 HOH HOH . L 4 HOH A 2 160 5 HOH HOH . L 4 HOH A 3 161 15 HOH HOH . L 4 HOH A 4 162 17 HOH HOH . L 4 HOH A 5 163 21 HOH HOH . L 4 HOH A 6 164 25 HOH HOH . L 4 HOH A 7 165 33 HOH HOH . L 4 HOH A 8 166 34 HOH HOH . L 4 HOH A 9 167 36 HOH HOH . L 4 HOH A 10 168 41 HOH HOH . L 4 HOH A 11 169 47 HOH HOH . L 4 HOH A 12 170 49 HOH HOH . L 4 HOH A 13 171 51 HOH HOH . L 4 HOH A 14 172 52 HOH HOH . L 4 HOH A 15 173 55 HOH HOH . L 4 HOH A 16 174 62 HOH HOH . L 4 HOH A 17 175 78 HOH HOH . L 4 HOH A 18 176 81 HOH HOH . L 4 HOH A 19 177 91 HOH HOH . L 4 HOH A 20 178 178 HOH HOH . L 4 HOH A 21 179 93 HOH HOH . L 4 HOH A 22 180 104 HOH HOH . L 4 HOH A 23 181 107 HOH HOH . L 4 HOH A 24 182 108 HOH HOH . L 4 HOH A 25 183 126 HOH HOH . L 4 HOH A 26 184 184 HOH HOH . L 4 HOH A 27 185 128 HOH HOH . L 4 HOH A 28 186 149 HOH HOH . L 4 HOH A 29 190 190 HOH HOH . L 4 HOH A 30 198 198 HOH HOH . L 4 HOH A 31 203 203 HOH HOH . L 4 HOH A 32 207 207 HOH HOH . L 4 HOH A 33 223 223 HOH HOH . L 4 HOH A 34 228 228 HOH HOH . L 4 HOH A 35 230 230 HOH HOH . L 4 HOH A 36 236 236 HOH HOH . L 4 HOH A 37 243 243 HOH HOH . L 4 HOH A 38 245 245 HOH HOH . L 4 HOH A 39 251 251 HOH HOH . L 4 HOH A 40 255 255 HOH HOH . L 4 HOH A 41 256 256 HOH HOH . L 4 HOH A 42 257 257 HOH HOH . L 4 HOH A 43 259 259 HOH HOH . L 4 HOH A 44 270 270 HOH HOH . L 4 HOH A 45 271 271 HOH HOH . L 4 HOH A 46 272 272 HOH HOH . L 4 HOH A 47 274 274 HOH HOH . L 4 HOH A 48 275 275 HOH HOH . L 4 HOH A 49 276 276 HOH HOH . L 4 HOH A 50 277 277 HOH HOH . L 4 HOH A 51 278 278 HOH HOH . L 4 HOH A 52 279 279 HOH HOH . L 4 HOH A 53 283 283 HOH HOH . L 4 HOH A 54 284 284 HOH HOH . M 4 HOH B 1 158 4 HOH HOH . M 4 HOH B 2 159 6 HOH HOH . M 4 HOH B 3 160 12 HOH HOH . M 4 HOH B 4 161 13 HOH HOH . M 4 HOH B 5 162 14 HOH HOH . M 4 HOH B 6 163 22 HOH HOH . M 4 HOH B 7 164 28 HOH HOH . M 4 HOH B 8 165 37 HOH HOH . M 4 HOH B 9 166 38 HOH HOH . M 4 HOH B 10 167 50 HOH HOH . M 4 HOH B 11 168 168 HOH HOH . M 4 HOH B 12 169 59 HOH HOH . M 4 HOH B 13 170 66 HOH HOH . M 4 HOH B 14 171 86 HOH HOH . M 4 HOH B 15 172 87 HOH HOH . M 4 HOH B 16 173 88 HOH HOH . M 4 HOH B 17 174 100 HOH HOH . M 4 HOH B 18 175 105 HOH HOH . M 4 HOH B 19 176 113 HOH HOH . M 4 HOH B 20 177 114 HOH HOH . M 4 HOH B 21 178 117 HOH HOH . M 4 HOH B 22 179 125 HOH HOH . M 4 HOH B 23 180 140 HOH HOH . M 4 HOH B 24 181 142 HOH HOH . M 4 HOH B 25 191 191 HOH HOH . M 4 HOH B 26 209 209 HOH HOH . M 4 HOH B 27 237 237 HOH HOH . M 4 HOH B 28 254 254 HOH HOH . M 4 HOH B 29 263 263 HOH HOH . M 4 HOH B 30 264 264 HOH HOH . M 4 HOH B 31 281 281 HOH HOH . M 4 HOH B 32 285 285 HOH HOH . N 4 HOH C 1 159 159 HOH HOH . N 4 HOH C 2 160 2 HOH HOH . N 4 HOH C 3 161 3 HOH HOH . N 4 HOH C 4 162 16 HOH HOH . N 4 HOH C 5 163 19 HOH HOH . N 4 HOH C 6 164 20 HOH HOH . N 4 HOH C 7 165 23 HOH HOH . N 4 HOH C 8 166 24 HOH HOH . N 4 HOH C 9 167 26 HOH HOH . N 4 HOH C 10 168 39 HOH HOH . N 4 HOH C 11 169 45 HOH HOH . N 4 HOH C 12 170 56 HOH HOH . N 4 HOH C 13 171 70 HOH HOH . N 4 HOH C 14 172 72 HOH HOH . N 4 HOH C 15 173 76 HOH HOH . N 4 HOH C 16 174 77 HOH HOH . N 4 HOH C 17 175 99 HOH HOH . N 4 HOH C 18 176 110 HOH HOH . N 4 HOH C 19 177 119 HOH HOH . N 4 HOH C 20 178 134 HOH HOH . N 4 HOH C 21 179 179 HOH HOH . N 4 HOH C 22 180 144 HOH HOH . N 4 HOH C 23 181 146 HOH HOH . N 4 HOH C 24 182 151 HOH HOH . N 4 HOH C 25 183 158 HOH HOH . N 4 HOH C 26 196 196 HOH HOH . N 4 HOH C 27 197 197 HOH HOH . N 4 HOH C 28 210 210 HOH HOH . N 4 HOH C 29 220 220 HOH HOH . N 4 HOH C 30 222 222 HOH HOH . N 4 HOH C 31 229 229 HOH HOH . N 4 HOH C 32 233 233 HOH HOH . N 4 HOH C 33 234 234 HOH HOH . N 4 HOH C 34 235 235 HOH HOH . N 4 HOH C 35 242 242 HOH HOH . N 4 HOH C 36 248 248 HOH HOH . N 4 HOH C 37 249 249 HOH HOH . N 4 HOH C 38 250 250 HOH HOH . N 4 HOH C 39 258 258 HOH HOH . N 4 HOH C 40 267 267 HOH HOH . N 4 HOH C 41 268 268 HOH HOH . N 4 HOH C 42 273 273 HOH HOH . N 4 HOH C 43 286 286 HOH HOH . O 4 HOH D 1 159 7 HOH HOH . O 4 HOH D 2 160 8 HOH HOH . O 4 HOH D 3 161 9 HOH HOH . O 4 HOH D 4 162 10 HOH HOH . O 4 HOH D 5 163 29 HOH HOH . O 4 HOH D 6 164 31 HOH HOH . O 4 HOH D 7 165 35 HOH HOH . O 4 HOH D 8 166 46 HOH HOH . O 4 HOH D 9 167 74 HOH HOH . O 4 HOH D 10 168 80 HOH HOH . O 4 HOH D 11 169 82 HOH HOH . O 4 HOH D 12 170 90 HOH HOH . O 4 HOH D 13 171 106 HOH HOH . O 4 HOH D 14 172 109 HOH HOH . O 4 HOH D 15 173 111 HOH HOH . O 4 HOH D 16 174 130 HOH HOH . O 4 HOH D 17 175 143 HOH HOH . O 4 HOH D 18 176 150 HOH HOH . O 4 HOH D 19 177 152 HOH HOH . O 4 HOH D 20 199 199 HOH HOH . O 4 HOH D 21 215 215 HOH HOH . O 4 HOH D 22 216 216 HOH HOH . O 4 HOH D 23 226 226 HOH HOH . O 4 HOH D 24 227 227 HOH HOH . O 4 HOH D 25 231 231 HOH HOH . O 4 HOH D 26 239 239 HOH HOH . O 4 HOH D 27 247 247 HOH HOH . O 4 HOH D 28 252 252 HOH HOH . O 4 HOH D 29 253 253 HOH HOH . O 4 HOH D 30 261 261 HOH HOH . O 4 HOH D 31 265 265 HOH HOH . O 4 HOH D 32 266 266 HOH HOH . O 4 HOH D 33 269 269 HOH HOH . O 4 HOH D 34 287 287 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 3 _atom_site.Cartn_x 12.153 _atom_site.Cartn_y -66.719 _atom_site.Cartn_z -33.284 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 158 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #