data_3NBQ
#
_model_server_result.job_id            7NSm2Kqa94oLB2DahHVFnA 
_model_server_result.datetime_utc      '2024-11-18 19:30:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3nbq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":400}' 
#
_entry.id    3NBQ 
#
_exptl.entry_id    3NBQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              130.077 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-FLUOROURACIL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3NBQ 
_cell.length_a            61.317 
_cell.length_b            85.281 
_cell.length_c            260.581 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3NBQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,I,J 1 1 
C,D,G,H,K,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C4 H3 F N2 O2' 
_chem_comp.formula_weight    130.077 
_chem_comp.id                URF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-FLUOROURACIL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 URF sing 330 n n 
N1 C6 URF sing 331 n n 
N1 HN1 URF sing 332 n n 
C2 N3 URF sing 333 n n 
C2 O2 URF doub 334 n n 
N3 C4 URF sing 335 n n 
N3 HN3 URF sing 336 n n 
C4 C5 URF sing 337 n n 
C4 O4 URF doub 338 n n 
C5 C6 URF doub 339 n n 
C5 F5 URF sing 340 n n 
C6 H6 URF sing 341 n n 
#
_atom_sites.entry_id                     3NBQ 
_atom_sites.fract_transf_matrix[1][1]    0.016309 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011726 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003838 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 URF A 1 400 400 URF URF . 
F 2 URF B 1 400 400 URF URF . 
G 2 URF C 1 400 400 URF URF . 
H 2 URF D 1 400 400 URF URF . 
I 3 HOH A 1 311 1 HOH HOH . 
I 3 HOH A 2 312 2 HOH HOH . 
I 3 HOH A 3 313 3 HOH HOH . 
I 3 HOH A 4 314 8 HOH HOH . 
I 3 HOH A 5 315 9 HOH HOH . 
I 3 HOH A 6 316 14 HOH HOH . 
I 3 HOH A 7 317 16 HOH HOH . 
I 3 HOH A 8 318 20 HOH HOH . 
I 3 HOH A 9 319 23 HOH HOH . 
I 3 HOH A 10 320 25 HOH HOH . 
I 3 HOH A 11 321 33 HOH HOH . 
I 3 HOH A 12 322 36 HOH HOH . 
I 3 HOH A 13 323 38 HOH HOH . 
I 3 HOH A 14 324 50 HOH HOH . 
I 3 HOH A 15 325 51 HOH HOH . 
I 3 HOH A 16 326 52 HOH HOH . 
I 3 HOH A 17 327 55 HOH HOH . 
I 3 HOH A 18 328 57 HOH HOH . 
I 3 HOH A 19 329 61 HOH HOH . 
I 3 HOH A 20 330 63 HOH HOH . 
I 3 HOH A 21 331 65 HOH HOH . 
I 3 HOH A 22 332 66 HOH HOH . 
I 3 HOH A 23 333 74 HOH HOH . 
I 3 HOH A 24 334 75 HOH HOH . 
I 3 HOH A 25 335 76 HOH HOH . 
I 3 HOH A 26 336 77 HOH HOH . 
I 3 HOH A 27 337 82 HOH HOH . 
I 3 HOH A 28 338 84 HOH HOH . 
I 3 HOH A 29 339 87 HOH HOH . 
I 3 HOH A 30 340 100 HOH HOH . 
I 3 HOH A 31 341 104 HOH HOH . 
I 3 HOH A 32 342 107 HOH HOH . 
I 3 HOH A 33 343 110 HOH HOH . 
I 3 HOH A 34 344 115 HOH HOH . 
I 3 HOH A 35 345 119 HOH HOH . 
I 3 HOH A 36 346 122 HOH HOH . 
I 3 HOH A 37 347 124 HOH HOH . 
I 3 HOH A 38 348 132 HOH HOH . 
I 3 HOH A 39 349 133 HOH HOH . 
J 3 HOH B 1 311 4 HOH HOH . 
J 3 HOH B 2 312 5 HOH HOH . 
J 3 HOH B 3 313 6 HOH HOH . 
J 3 HOH B 4 314 10 HOH HOH . 
J 3 HOH B 5 315 11 HOH HOH . 
J 3 HOH B 6 316 28 HOH HOH . 
J 3 HOH B 7 317 29 HOH HOH . 
J 3 HOH B 8 318 30 HOH HOH . 
J 3 HOH B 9 319 35 HOH HOH . 
J 3 HOH B 10 320 39 HOH HOH . 
J 3 HOH B 11 321 44 HOH HOH . 
J 3 HOH B 12 322 46 HOH HOH . 
J 3 HOH B 13 323 47 HOH HOH . 
J 3 HOH B 14 324 48 HOH HOH . 
J 3 HOH B 15 325 62 HOH HOH . 
J 3 HOH B 16 326 70 HOH HOH . 
J 3 HOH B 17 327 78 HOH HOH . 
J 3 HOH B 18 328 80 HOH HOH . 
J 3 HOH B 19 329 81 HOH HOH . 
J 3 HOH B 20 330 83 HOH HOH . 
J 3 HOH B 21 331 85 HOH HOH . 
J 3 HOH B 22 332 86 HOH HOH . 
J 3 HOH B 23 333 88 HOH HOH . 
J 3 HOH B 24 334 90 HOH HOH . 
J 3 HOH B 25 335 92 HOH HOH . 
J 3 HOH B 26 336 94 HOH HOH . 
J 3 HOH B 27 337 101 HOH HOH . 
J 3 HOH B 28 338 102 HOH HOH . 
J 3 HOH B 29 339 103 HOH HOH . 
J 3 HOH B 30 340 105 HOH HOH . 
J 3 HOH B 31 341 120 HOH HOH . 
J 3 HOH B 32 342 121 HOH HOH . 
J 3 HOH B 33 343 123 HOH HOH . 
J 3 HOH B 34 344 126 HOH HOH . 
J 3 HOH B 35 345 130 HOH HOH . 
K 3 HOH C 1 311 13 HOH HOH . 
K 3 HOH C 2 312 15 HOH HOH . 
K 3 HOH C 3 313 18 HOH HOH . 
K 3 HOH C 4 314 19 HOH HOH . 
K 3 HOH C 5 315 21 HOH HOH . 
K 3 HOH C 6 316 24 HOH HOH . 
K 3 HOH C 7 317 26 HOH HOH . 
K 3 HOH C 8 318 27 HOH HOH . 
K 3 HOH C 9 319 31 HOH HOH . 
K 3 HOH C 10 320 40 HOH HOH . 
K 3 HOH C 11 321 41 HOH HOH . 
K 3 HOH C 12 322 42 HOH HOH . 
K 3 HOH C 13 323 43 HOH HOH . 
K 3 HOH C 14 324 45 HOH HOH . 
K 3 HOH C 15 325 49 HOH HOH . 
K 3 HOH C 16 326 53 HOH HOH . 
K 3 HOH C 17 327 58 HOH HOH . 
K 3 HOH C 18 328 59 HOH HOH . 
K 3 HOH C 19 329 69 HOH HOH . 
K 3 HOH C 20 330 71 HOH HOH . 
K 3 HOH C 21 331 72 HOH HOH . 
K 3 HOH C 22 332 95 HOH HOH . 
K 3 HOH C 23 333 98 HOH HOH . 
K 3 HOH C 24 334 99 HOH HOH . 
K 3 HOH C 25 335 106 HOH HOH . 
K 3 HOH C 26 336 111 HOH HOH . 
K 3 HOH C 27 337 112 HOH HOH . 
K 3 HOH C 28 338 113 HOH HOH . 
K 3 HOH C 29 339 117 HOH HOH . 
K 3 HOH C 30 340 118 HOH HOH . 
K 3 HOH C 31 341 127 HOH HOH . 
K 3 HOH C 32 342 128 HOH HOH . 
K 3 HOH C 33 343 131 HOH HOH . 
L 3 HOH D 1 311 7 HOH HOH . 
L 3 HOH D 2 312 12 HOH HOH . 
L 3 HOH D 3 313 17 HOH HOH . 
L 3 HOH D 4 314 32 HOH HOH . 
L 3 HOH D 5 315 34 HOH HOH . 
L 3 HOH D 6 316 37 HOH HOH . 
L 3 HOH D 7 317 54 HOH HOH . 
L 3 HOH D 8 318 56 HOH HOH . 
L 3 HOH D 9 319 60 HOH HOH . 
L 3 HOH D 10 320 64 HOH HOH . 
L 3 HOH D 11 321 73 HOH HOH . 
L 3 HOH D 12 322 79 HOH HOH . 
L 3 HOH D 13 323 89 HOH HOH . 
L 3 HOH D 14 324 91 HOH HOH . 
L 3 HOH D 15 325 96 HOH HOH . 
L 3 HOH D 16 326 97 HOH HOH . 
L 3 HOH D 17 327 108 HOH HOH . 
L 3 HOH D 18 328 109 HOH HOH . 
L 3 HOH D 19 329 114 HOH HOH . 
L 3 HOH D 20 330 125 HOH HOH . 
L 3 HOH D 21 331 129 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 URF . . . F 2 -23.88 -0.071 -8.153 1 22.52 ? N1 URF 400 B 1 
HETATM 2 C C2 URF . . . F 2 -23.709 -1.382 -8.532 1 20.76 ? C2 URF 400 B 1 
HETATM 3 N N3 URF . . . F 2 -24.738 -2.302 -8.3 1 22.39 ? N3 URF 400 B 1 
HETATM 4 C C4 URF . . . F 2 -25.946 -1.904 -7.686 1 23 ? C4 URF 400 B 1 
HETATM 5 C C5 URF . . . F 2 -26.124 -0.596 -7.297 1 22.1 ? C5 URF 400 B 1 
HETATM 6 C C6 URF . . . F 2 -25.094 0.333 -7.521 1 23.29 ? C6 URF 400 B 1 
HETATM 7 O O2 URF . . . F 2 -22.673 -1.736 -9.083 1 20.58 ? O2 URF 400 B 1 
HETATM 8 O O4 URF . . . F 2 -26.846 -2.725 -7.488 1 24.15 ? O4 URF 400 B 1 
HETATM 9 F F5 URF . . . F 2 -27.293 -0.242 -6.701 1 25.73 ? F5 URF 400 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           233 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           9 
#