data_3NCC # _model_server_result.job_id KUMFgLB5zsQkvSFycfEnnA _model_server_result.datetime_utc '2024-12-21 16:13:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ncc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":215}' # _entry.id 3NCC # _exptl.entry_id 3NCC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.009 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CARBONATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3NCC _cell.length_a 123.411 _cell.length_b 123.411 _cell.length_c 73.148 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NCC _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 45 A CYS 58 1_555 A SG CYS 161 A CYS 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? disulf ? disulf2 A SG CYS 178 A CYS 191 1_555 A SG CYS 186 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? disulf ? disulf3 B SG CYS 12 B CYS 12 1_555 B SG CYS 22 B CYS 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? disulf ? disulf4 B SG CYS 51 B CYS 51 1_555 B SG CYS 62 B CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc1 H O HOH . A HOH 238 1_555 D NA NA . B NA 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc2 H O HOH . A HOH 244 1_555 D NA NA . B NA 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc3 B OG1 THR 19 B THR 19 1_555 C NA NA . B NA 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.019 ? metalc ? metalc4 B OG1 THR 21 B THR 21 1_555 C NA NA . B NA 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.069 ? metalc ? metalc5 B O TYR 54 B TYR 54 1_555 F NA NA . B NA 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.968 ? metalc ? metalc6 B O SER 61 B SER 61 1_555 F NA NA . B NA 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? metalc ? metalc7 B O LYS 66 B LYS 66 1_555 D NA NA . B NA 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc8 B O THR 69 B THR 69 1_555 D NA NA . B NA 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc9 D NA NA . B NA 212 1_555 I O HOH . B HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc10 F NA NA . B NA 214 1_555 I O HOH . B HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.124 ? metalc ? metalc11 F NA NA . B NA 214 1_555 I O HOH . B HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.172 ? # _chem_comp.formula 'C O3 -2' _chem_comp.formula_weight 60.009 _chem_comp.id CO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'CARBONATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 CO3 doub 70 n n C O2 CO3 sing 71 n n C O3 CO3 sing 72 n n # _atom_sites.entry_id 3NCC _atom_sites.fract_transf_matrix[1][1] 0.008103 _atom_sites.fract_transf_matrix[1][2] 0.004678 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009357 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013671 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA B 1 211 1 NA NA . D 3 NA B 1 212 2 NA NA . E 4 CL B 1 213 3 CL CL . F 3 NA B 1 214 4 NA NA . G 5 CO3 B 1 215 5 CO3 CO3 . H 6 HOH A 1 5 5 HOH HOH . H 6 HOH A 2 7 7 HOH HOH . H 6 HOH A 3 12 12 HOH HOH . H 6 HOH A 4 200 16 HOH HOH . H 6 HOH A 5 201 18 HOH HOH . H 6 HOH A 6 202 21 HOH HOH . H 6 HOH A 7 203 22 HOH HOH . H 6 HOH A 8 204 23 HOH HOH . H 6 HOH A 9 205 24 HOH HOH . H 6 HOH A 10 206 206 HOH HOH . H 6 HOH A 11 207 26 HOH HOH . H 6 HOH A 12 208 30 HOH HOH . H 6 HOH A 13 209 32 HOH HOH . H 6 HOH A 14 210 210 HOH HOH . H 6 HOH A 15 211 34 HOH HOH . H 6 HOH A 16 212 212 HOH HOH . H 6 HOH A 17 213 213 HOH HOH . H 6 HOH A 18 214 214 HOH HOH . H 6 HOH A 19 215 35 HOH HOH . H 6 HOH A 20 216 36 HOH HOH . H 6 HOH A 21 217 217 HOH HOH . H 6 HOH A 22 218 42 HOH HOH . H 6 HOH A 23 219 43 HOH HOH . H 6 HOH A 24 220 48 HOH HOH . H 6 HOH A 25 221 50 HOH HOH . H 6 HOH A 26 222 222 HOH HOH . H 6 HOH A 27 223 52 HOH HOH . H 6 HOH A 28 224 53 HOH HOH . H 6 HOH A 29 225 55 HOH HOH . H 6 HOH A 30 226 226 HOH HOH . H 6 HOH A 31 227 62 HOH HOH . H 6 HOH A 32 228 68 HOH HOH . H 6 HOH A 33 229 229 HOH HOH . H 6 HOH A 34 230 71 HOH HOH . H 6 HOH A 35 231 74 HOH HOH . H 6 HOH A 36 232 79 HOH HOH . H 6 HOH A 37 233 80 HOH HOH . H 6 HOH A 38 234 81 HOH HOH . H 6 HOH A 39 235 82 HOH HOH . H 6 HOH A 40 236 90 HOH HOH . H 6 HOH A 41 237 95 HOH HOH . H 6 HOH A 42 238 107 HOH HOH . H 6 HOH A 43 239 108 HOH HOH . H 6 HOH A 44 240 110 HOH HOH . H 6 HOH A 45 241 116 HOH HOH . H 6 HOH A 46 242 117 HOH HOH . H 6 HOH A 47 243 118 HOH HOH . H 6 HOH A 48 244 119 HOH HOH . H 6 HOH A 49 245 120 HOH HOH . H 6 HOH A 50 246 121 HOH HOH . H 6 HOH A 51 247 122 HOH HOH . H 6 HOH A 52 248 125 HOH HOH . H 6 HOH A 53 249 128 HOH HOH . H 6 HOH A 54 250 129 HOH HOH . H 6 HOH A 55 251 130 HOH HOH . H 6 HOH A 56 252 131 HOH HOH . H 6 HOH A 57 253 134 HOH HOH . H 6 HOH A 58 254 136 HOH HOH . H 6 HOH A 59 255 138 HOH HOH . H 6 HOH A 60 256 139 HOH HOH . H 6 HOH A 61 257 140 HOH HOH . H 6 HOH A 62 258 141 HOH HOH . H 6 HOH A 63 259 143 HOH HOH . H 6 HOH A 64 260 144 HOH HOH . H 6 HOH A 65 261 145 HOH HOH . H 6 HOH A 66 262 146 HOH HOH . H 6 HOH A 67 263 151 HOH HOH . H 6 HOH A 68 264 152 HOH HOH . H 6 HOH A 69 265 153 HOH HOH . H 6 HOH A 70 266 154 HOH HOH . H 6 HOH A 71 267 156 HOH HOH . H 6 HOH A 72 268 157 HOH HOH . H 6 HOH A 73 269 159 HOH HOH . H 6 HOH A 74 270 161 HOH HOH . H 6 HOH A 75 271 163 HOH HOH . H 6 HOH A 76 272 164 HOH HOH . H 6 HOH A 77 273 165 HOH HOH . H 6 HOH A 78 274 168 HOH HOH . H 6 HOH A 79 275 169 HOH HOH . H 6 HOH A 80 276 170 HOH HOH . H 6 HOH A 81 277 172 HOH HOH . H 6 HOH A 82 278 175 HOH HOH . H 6 HOH A 83 279 178 HOH HOH . H 6 HOH A 84 280 179 HOH HOH . H 6 HOH A 85 281 182 HOH HOH . H 6 HOH A 86 282 184 HOH HOH . H 6 HOH A 87 283 185 HOH HOH . H 6 HOH A 88 284 186 HOH HOH . H 6 HOH A 89 285 187 HOH HOH . H 6 HOH A 90 286 188 HOH HOH . H 6 HOH A 91 287 189 HOH HOH . H 6 HOH A 92 288 190 HOH HOH . H 6 HOH A 93 289 191 HOH HOH . I 6 HOH B 1 216 216 HOH HOH . I 6 HOH B 2 217 1 HOH HOH . I 6 HOH B 3 218 218 HOH HOH . I 6 HOH B 4 219 219 HOH HOH . I 6 HOH B 5 220 220 HOH HOH . I 6 HOH B 6 221 221 HOH HOH . I 6 HOH B 7 222 2 HOH HOH . I 6 HOH B 8 223 223 HOH HOH . I 6 HOH B 9 224 224 HOH HOH . I 6 HOH B 10 225 225 HOH HOH . I 6 HOH B 11 226 3 HOH HOH . I 6 HOH B 12 227 227 HOH HOH . I 6 HOH B 13 228 228 HOH HOH . I 6 HOH B 14 229 4 HOH HOH . I 6 HOH B 15 230 6 HOH HOH . I 6 HOH B 16 231 8 HOH HOH . I 6 HOH B 17 232 9 HOH HOH . I 6 HOH B 18 233 10 HOH HOH . I 6 HOH B 19 234 11 HOH HOH . I 6 HOH B 20 235 13 HOH HOH . I 6 HOH B 21 236 14 HOH HOH . I 6 HOH B 22 237 15 HOH HOH . I 6 HOH B 23 238 17 HOH HOH . I 6 HOH B 24 239 19 HOH HOH . I 6 HOH B 25 240 20 HOH HOH . I 6 HOH B 26 241 25 HOH HOH . I 6 HOH B 27 242 27 HOH HOH . I 6 HOH B 28 243 28 HOH HOH . I 6 HOH B 29 244 29 HOH HOH . I 6 HOH B 30 245 31 HOH HOH . I 6 HOH B 31 246 33 HOH HOH . I 6 HOH B 32 247 37 HOH HOH . I 6 HOH B 33 248 38 HOH HOH . I 6 HOH B 34 249 39 HOH HOH . I 6 HOH B 35 250 40 HOH HOH . I 6 HOH B 36 251 41 HOH HOH . I 6 HOH B 37 252 44 HOH HOH . I 6 HOH B 38 253 45 HOH HOH . I 6 HOH B 39 254 46 HOH HOH . I 6 HOH B 40 255 47 HOH HOH . I 6 HOH B 41 256 49 HOH HOH . I 6 HOH B 42 257 51 HOH HOH . I 6 HOH B 43 258 54 HOH HOH . I 6 HOH B 44 259 56 HOH HOH . I 6 HOH B 45 260 57 HOH HOH . I 6 HOH B 46 261 58 HOH HOH . I 6 HOH B 47 262 59 HOH HOH . I 6 HOH B 48 263 60 HOH HOH . I 6 HOH B 49 264 61 HOH HOH . I 6 HOH B 50 265 63 HOH HOH . I 6 HOH B 51 266 64 HOH HOH . I 6 HOH B 52 267 65 HOH HOH . I 6 HOH B 53 268 66 HOH HOH . I 6 HOH B 54 269 67 HOH HOH . I 6 HOH B 55 270 69 HOH HOH . I 6 HOH B 56 271 70 HOH HOH . I 6 HOH B 57 272 72 HOH HOH . I 6 HOH B 58 273 73 HOH HOH . I 6 HOH B 59 274 75 HOH HOH . I 6 HOH B 60 275 76 HOH HOH . I 6 HOH B 61 276 77 HOH HOH . I 6 HOH B 62 277 78 HOH HOH . I 6 HOH B 63 278 83 HOH HOH . I 6 HOH B 64 279 84 HOH HOH . I 6 HOH B 65 280 85 HOH HOH . I 6 HOH B 66 281 86 HOH HOH . I 6 HOH B 67 282 87 HOH HOH . I 6 HOH B 68 283 88 HOH HOH . I 6 HOH B 69 284 89 HOH HOH . I 6 HOH B 70 285 91 HOH HOH . I 6 HOH B 71 286 92 HOH HOH . I 6 HOH B 72 287 93 HOH HOH . I 6 HOH B 73 288 94 HOH HOH . I 6 HOH B 74 289 96 HOH HOH . I 6 HOH B 75 290 97 HOH HOH . I 6 HOH B 76 291 98 HOH HOH . I 6 HOH B 77 292 99 HOH HOH . I 6 HOH B 78 293 100 HOH HOH . I 6 HOH B 79 294 101 HOH HOH . I 6 HOH B 80 295 102 HOH HOH . I 6 HOH B 81 296 103 HOH HOH . I 6 HOH B 82 297 104 HOH HOH . I 6 HOH B 83 298 105 HOH HOH . I 6 HOH B 84 299 106 HOH HOH . I 6 HOH B 85 300 109 HOH HOH . I 6 HOH B 86 301 111 HOH HOH . I 6 HOH B 87 302 112 HOH HOH . I 6 HOH B 88 303 113 HOH HOH . I 6 HOH B 89 304 114 HOH HOH . I 6 HOH B 90 305 115 HOH HOH . I 6 HOH B 91 306 123 HOH HOH . I 6 HOH B 92 307 124 HOH HOH . I 6 HOH B 93 308 126 HOH HOH . I 6 HOH B 94 309 127 HOH HOH . I 6 HOH B 95 310 132 HOH HOH . I 6 HOH B 96 311 133 HOH HOH . I 6 HOH B 97 312 135 HOH HOH . I 6 HOH B 98 313 137 HOH HOH . I 6 HOH B 99 314 142 HOH HOH . I 6 HOH B 100 315 147 HOH HOH . I 6 HOH B 101 316 148 HOH HOH . I 6 HOH B 102 317 149 HOH HOH . I 6 HOH B 103 318 150 HOH HOH . I 6 HOH B 104 319 155 HOH HOH . I 6 HOH B 105 320 158 HOH HOH . I 6 HOH B 106 321 160 HOH HOH . I 6 HOH B 107 322 162 HOH HOH . I 6 HOH B 108 323 166 HOH HOH . I 6 HOH B 109 324 167 HOH HOH . I 6 HOH B 110 325 171 HOH HOH . I 6 HOH B 111 326 173 HOH HOH . I 6 HOH B 112 327 174 HOH HOH . I 6 HOH B 113 328 176 HOH HOH . I 6 HOH B 114 329 177 HOH HOH . I 6 HOH B 115 330 180 HOH HOH . I 6 HOH B 116 331 181 HOH HOH . I 6 HOH B 117 332 183 HOH HOH . I 6 HOH B 118 333 192 HOH HOH . I 6 HOH B 119 334 193 HOH HOH . I 6 HOH B 120 335 194 HOH HOH . I 6 HOH B 121 336 195 HOH HOH . I 6 HOH B 122 337 196 HOH HOH . I 6 HOH B 123 338 197 HOH HOH . I 6 HOH B 124 339 198 HOH HOH . I 6 HOH B 125 340 199 HOH HOH . I 6 HOH B 126 341 200 HOH HOH . I 6 HOH B 127 342 201 HOH HOH . I 6 HOH B 128 343 202 HOH HOH . I 6 HOH B 129 344 203 HOH HOH . I 6 HOH B 130 345 204 HOH HOH . I 6 HOH B 131 346 205 HOH HOH . I 6 HOH B 132 347 207 HOH HOH . I 6 HOH B 133 348 208 HOH HOH . I 6 HOH B 134 349 209 HOH HOH . I 6 HOH B 135 350 211 HOH HOH . I 6 HOH B 136 351 215 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C CO3 . . . G 5 -14.438 -32.928 -3.225 1 66.59 ? C CO3 215 B 1 HETATM 2 O O1 CO3 . . . G 5 -13.968 -32.414 -4.347 1 65.81 ? O1 CO3 215 B 1 HETATM 3 O O2 CO3 . . . G 5 -13.68 -33 -2.158 1 66.08 ? O2 CO3 215 B 1 HETATM 4 O O3 CO3 . . . G 5 -15.671 -33.374 -3.146 1 66.74 ? O3 CO3 215 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #