data_3NE8 # _model_server_result.job_id lX-SoYh9kNK0ypqUnQCOPA _model_server_result.datetime_utc '2024-11-26 01:30:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ne8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":3}' # _entry.id 3NE8 # _exptl.entry_id 3NE8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.46 _cell.angle_gamma 90 _cell.entry_id 3NE8 _cell.length_a 71.185 _cell.length_b 53.511 _cell.length_c 58.495 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NE8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 70.715377 0 58.493115 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 211 A GLN 386 1_555 A N MSE 212 A MSE 387 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C MSE 212 A MSE 387 1_555 A N ALA 213 A ALA 388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C ILE 230 A ILE 405 1_555 A N MSE 231 A MSE 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C MSE 231 A MSE 406 1_555 A N GLN 232 A GLN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 B ZN ZN . A ZN 1 1_555 A NE2 HIS 13 A HIS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc2 B ZN ZN . A ZN 1 1_555 A OE2 GLU 28 A GLU 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc3 B ZN ZN . A ZN 1 1_555 A ND1 HIS 82 A HIS 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc4 B ZN ZN . A ZN 1 1_555 A OD1 ASP 84 A ASP 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc5 B ZN ZN . A ZN 1 1_555 A OD2 ASP 84 A ASP 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc6 B ZN ZN . A ZN 1 1_555 A OE2 GLU 115 A GLU 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 3NE8 _atom_sites.fract_transf_matrix[1][1] 0.014048 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000112 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018688 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017096 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1 1 ZN ZN . C 3 ACT A 1 410 1 ACT ACT . D 3 ACT A 1 2 2 ACT ACT . E 3 ACT A 1 3 3 ACT ACT . F 4 FMT A 1 411 1 FMT FMT . G 5 GOL A 1 412 1 GOL GOL . H 5 GOL A 1 413 2 GOL GOL . I 5 GOL A 1 414 3 GOL GOL . J 6 HOH A 1 4 4 HOH HOH . J 6 HOH A 2 5 5 HOH HOH . J 6 HOH A 3 6 6 HOH HOH . J 6 HOH A 4 7 7 HOH HOH . J 6 HOH A 5 8 8 HOH HOH . J 6 HOH A 6 9 9 HOH HOH . J 6 HOH A 7 10 10 HOH HOH . J 6 HOH A 8 11 11 HOH HOH . J 6 HOH A 9 12 12 HOH HOH . J 6 HOH A 10 13 13 HOH HOH . J 6 HOH A 11 14 14 HOH HOH . J 6 HOH A 12 15 15 HOH HOH . J 6 HOH A 13 16 16 HOH HOH . J 6 HOH A 14 17 17 HOH HOH . J 6 HOH A 15 18 18 HOH HOH . J 6 HOH A 16 19 19 HOH HOH . J 6 HOH A 17 20 20 HOH HOH . J 6 HOH A 18 21 21 HOH HOH . J 6 HOH A 19 22 22 HOH HOH . J 6 HOH A 20 23 23 HOH HOH . J 6 HOH A 21 24 24 HOH HOH . J 6 HOH A 22 25 25 HOH HOH . J 6 HOH A 23 26 26 HOH HOH . J 6 HOH A 24 27 27 HOH HOH . J 6 HOH A 25 28 28 HOH HOH . J 6 HOH A 26 29 29 HOH HOH . J 6 HOH A 27 30 30 HOH HOH . J 6 HOH A 28 31 31 HOH HOH . J 6 HOH A 29 32 32 HOH HOH . J 6 HOH A 30 33 33 HOH HOH . J 6 HOH A 31 34 34 HOH HOH . J 6 HOH A 32 35 35 HOH HOH . J 6 HOH A 33 36 36 HOH HOH . J 6 HOH A 34 37 37 HOH HOH . J 6 HOH A 35 38 38 HOH HOH . J 6 HOH A 36 39 39 HOH HOH . J 6 HOH A 37 40 40 HOH HOH . J 6 HOH A 38 41 41 HOH HOH . J 6 HOH A 39 42 42 HOH HOH . J 6 HOH A 40 43 43 HOH HOH . J 6 HOH A 41 44 44 HOH HOH . J 6 HOH A 42 45 45 HOH HOH . J 6 HOH A 43 46 46 HOH HOH . J 6 HOH A 44 47 47 HOH HOH . J 6 HOH A 45 48 48 HOH HOH . J 6 HOH A 46 49 49 HOH HOH . J 6 HOH A 47 50 50 HOH HOH . J 6 HOH A 48 51 51 HOH HOH . J 6 HOH A 49 52 52 HOH HOH . J 6 HOH A 50 53 53 HOH HOH . J 6 HOH A 51 54 54 HOH HOH . J 6 HOH A 52 55 55 HOH HOH . J 6 HOH A 53 56 56 HOH HOH . J 6 HOH A 54 57 57 HOH HOH . J 6 HOH A 55 58 58 HOH HOH . J 6 HOH A 56 59 59 HOH HOH . J 6 HOH A 57 60 60 HOH HOH . J 6 HOH A 58 61 61 HOH HOH . J 6 HOH A 59 62 62 HOH HOH . J 6 HOH A 60 63 63 HOH HOH . J 6 HOH A 61 64 64 HOH HOH . J 6 HOH A 62 65 65 HOH HOH . J 6 HOH A 63 66 66 HOH HOH . J 6 HOH A 64 67 67 HOH HOH . J 6 HOH A 65 68 68 HOH HOH . J 6 HOH A 66 69 69 HOH HOH . J 6 HOH A 67 70 70 HOH HOH . J 6 HOH A 68 71 71 HOH HOH . J 6 HOH A 69 72 72 HOH HOH . J 6 HOH A 70 73 73 HOH HOH . J 6 HOH A 71 74 74 HOH HOH . J 6 HOH A 72 75 75 HOH HOH . J 6 HOH A 73 76 76 HOH HOH . J 6 HOH A 74 77 77 HOH HOH . J 6 HOH A 75 78 78 HOH HOH . J 6 HOH A 76 79 79 HOH HOH . J 6 HOH A 77 80 80 HOH HOH . J 6 HOH A 78 81 81 HOH HOH . J 6 HOH A 79 82 82 HOH HOH . J 6 HOH A 80 83 83 HOH HOH . J 6 HOH A 81 84 84 HOH HOH . J 6 HOH A 82 85 85 HOH HOH . J 6 HOH A 83 86 86 HOH HOH . J 6 HOH A 84 87 87 HOH HOH . J 6 HOH A 85 88 88 HOH HOH . J 6 HOH A 86 89 89 HOH HOH . J 6 HOH A 87 90 90 HOH HOH . J 6 HOH A 88 91 91 HOH HOH . J 6 HOH A 89 92 92 HOH HOH . J 6 HOH A 90 93 93 HOH HOH . J 6 HOH A 91 94 94 HOH HOH . J 6 HOH A 92 95 95 HOH HOH . J 6 HOH A 93 96 96 HOH HOH . J 6 HOH A 94 97 97 HOH HOH . J 6 HOH A 95 98 98 HOH HOH . J 6 HOH A 96 99 99 HOH HOH . J 6 HOH A 97 100 100 HOH HOH . J 6 HOH A 98 101 101 HOH HOH . J 6 HOH A 99 102 102 HOH HOH . J 6 HOH A 100 103 103 HOH HOH . J 6 HOH A 101 104 104 HOH HOH . J 6 HOH A 102 105 105 HOH HOH . J 6 HOH A 103 106 106 HOH HOH . J 6 HOH A 104 107 107 HOH HOH . J 6 HOH A 105 108 108 HOH HOH . J 6 HOH A 106 109 109 HOH HOH . J 6 HOH A 107 110 110 HOH HOH . J 6 HOH A 108 111 111 HOH HOH . J 6 HOH A 109 112 112 HOH HOH . J 6 HOH A 110 113 113 HOH HOH . J 6 HOH A 111 114 114 HOH HOH . J 6 HOH A 112 115 115 HOH HOH . J 6 HOH A 113 116 116 HOH HOH . J 6 HOH A 114 117 117 HOH HOH . J 6 HOH A 115 118 118 HOH HOH . J 6 HOH A 116 119 119 HOH HOH . J 6 HOH A 117 120 120 HOH HOH . J 6 HOH A 118 121 121 HOH HOH . J 6 HOH A 119 122 122 HOH HOH . J 6 HOH A 120 123 123 HOH HOH . J 6 HOH A 121 124 124 HOH HOH . J 6 HOH A 122 125 125 HOH HOH . J 6 HOH A 123 126 126 HOH HOH . J 6 HOH A 124 127 127 HOH HOH . J 6 HOH A 125 128 128 HOH HOH . J 6 HOH A 126 129 129 HOH HOH . J 6 HOH A 127 130 130 HOH HOH . J 6 HOH A 128 131 131 HOH HOH . J 6 HOH A 129 132 132 HOH HOH . J 6 HOH A 130 133 133 HOH HOH . J 6 HOH A 131 134 134 HOH HOH . J 6 HOH A 132 135 135 HOH HOH . J 6 HOH A 133 136 136 HOH HOH . J 6 HOH A 134 137 137 HOH HOH . J 6 HOH A 135 138 138 HOH HOH . J 6 HOH A 136 139 139 HOH HOH . J 6 HOH A 137 140 140 HOH HOH . J 6 HOH A 138 141 141 HOH HOH . J 6 HOH A 139 142 142 HOH HOH . J 6 HOH A 140 143 143 HOH HOH . J 6 HOH A 141 144 144 HOH HOH . J 6 HOH A 142 145 145 HOH HOH . J 6 HOH A 143 146 146 HOH HOH . J 6 HOH A 144 147 147 HOH HOH . J 6 HOH A 145 148 148 HOH HOH . J 6 HOH A 146 149 149 HOH HOH . J 6 HOH A 147 150 150 HOH HOH . J 6 HOH A 148 151 151 HOH HOH . J 6 HOH A 149 152 152 HOH HOH . J 6 HOH A 150 153 153 HOH HOH . J 6 HOH A 151 154 154 HOH HOH . J 6 HOH A 152 155 155 HOH HOH . J 6 HOH A 153 156 156 HOH HOH . J 6 HOH A 154 157 157 HOH HOH . J 6 HOH A 155 158 158 HOH HOH . J 6 HOH A 156 159 159 HOH HOH . J 6 HOH A 157 160 160 HOH HOH . J 6 HOH A 158 161 161 HOH HOH . J 6 HOH A 159 162 162 HOH HOH . J 6 HOH A 160 163 163 HOH HOH . J 6 HOH A 161 164 164 HOH HOH . J 6 HOH A 162 165 165 HOH HOH . J 6 HOH A 163 166 166 HOH HOH . J 6 HOH A 164 167 167 HOH HOH . J 6 HOH A 165 168 168 HOH HOH . J 6 HOH A 166 169 169 HOH HOH . J 6 HOH A 167 170 170 HOH HOH . J 6 HOH A 168 171 171 HOH HOH . J 6 HOH A 169 172 172 HOH HOH . J 6 HOH A 170 173 173 HOH HOH . J 6 HOH A 171 174 174 HOH HOH . J 6 HOH A 172 175 175 HOH HOH . J 6 HOH A 173 415 1 HOH HOH . J 6 HOH A 174 416 2 HOH HOH . J 6 HOH A 175 417 3 HOH HOH . J 6 HOH A 176 418 176 HOH HOH . J 6 HOH A 177 419 177 HOH HOH . J 6 HOH A 178 420 178 HOH HOH . J 6 HOH A 179 421 179 HOH HOH . J 6 HOH A 180 422 180 HOH HOH . J 6 HOH A 181 423 181 HOH HOH . J 6 HOH A 182 424 182 HOH HOH . J 6 HOH A 183 425 183 HOH HOH . J 6 HOH A 184 426 184 HOH HOH . J 6 HOH A 185 427 185 HOH HOH . J 6 HOH A 186 428 186 HOH HOH . J 6 HOH A 187 429 187 HOH HOH . J 6 HOH A 188 430 188 HOH HOH . J 6 HOH A 189 431 189 HOH HOH . J 6 HOH A 190 432 190 HOH HOH . J 6 HOH A 191 433 191 HOH HOH . J 6 HOH A 192 434 192 HOH HOH . J 6 HOH A 193 435 193 HOH HOH . J 6 HOH A 194 436 194 HOH HOH . J 6 HOH A 195 437 195 HOH HOH . J 6 HOH A 196 438 196 HOH HOH . J 6 HOH A 197 439 197 HOH HOH . J 6 HOH A 198 440 198 HOH HOH . J 6 HOH A 199 441 199 HOH HOH . J 6 HOH A 200 442 200 HOH HOH . J 6 HOH A 201 443 201 HOH HOH . J 6 HOH A 202 444 202 HOH HOH . J 6 HOH A 203 445 203 HOH HOH . J 6 HOH A 204 446 204 HOH HOH . J 6 HOH A 205 447 205 HOH HOH . J 6 HOH A 206 448 206 HOH HOH . J 6 HOH A 207 449 207 HOH HOH . J 6 HOH A 208 450 208 HOH HOH . J 6 HOH A 209 451 209 HOH HOH . J 6 HOH A 210 452 210 HOH HOH . J 6 HOH A 211 453 211 HOH HOH . J 6 HOH A 212 454 212 HOH HOH . J 6 HOH A 213 455 213 HOH HOH . J 6 HOH A 214 456 214 HOH HOH . J 6 HOH A 215 457 215 HOH HOH . J 6 HOH A 216 458 216 HOH HOH . J 6 HOH A 217 459 217 HOH HOH . J 6 HOH A 218 460 218 HOH HOH . J 6 HOH A 219 461 219 HOH HOH . J 6 HOH A 220 462 220 HOH HOH . J 6 HOH A 221 463 221 HOH HOH . J 6 HOH A 222 464 222 HOH HOH . J 6 HOH A 223 465 223 HOH HOH . J 6 HOH A 224 466 224 HOH HOH . J 6 HOH A 225 467 225 HOH HOH . J 6 HOH A 226 468 226 HOH HOH . J 6 HOH A 227 469 227 HOH HOH . J 6 HOH A 228 470 228 HOH HOH . J 6 HOH A 229 471 229 HOH HOH . J 6 HOH A 230 472 230 HOH HOH . J 6 HOH A 231 473 231 HOH HOH . J 6 HOH A 232 474 232 HOH HOH . J 6 HOH A 233 475 233 HOH HOH . J 6 HOH A 234 476 234 HOH HOH . J 6 HOH A 235 477 235 HOH HOH . J 6 HOH A 236 478 236 HOH HOH . J 6 HOH A 237 479 237 HOH HOH . J 6 HOH A 238 480 238 HOH HOH . J 6 HOH A 239 481 239 HOH HOH . J 6 HOH A 240 482 240 HOH HOH . J 6 HOH A 241 483 241 HOH HOH . J 6 HOH A 242 484 242 HOH HOH . J 6 HOH A 243 485 243 HOH HOH . J 6 HOH A 244 486 244 HOH HOH . J 6 HOH A 245 487 245 HOH HOH . J 6 HOH A 246 488 246 HOH HOH . J 6 HOH A 247 489 247 HOH HOH . J 6 HOH A 248 490 248 HOH HOH . J 6 HOH A 249 491 249 HOH HOH . J 6 HOH A 250 492 250 HOH HOH . J 6 HOH A 251 493 251 HOH HOH . J 6 HOH A 252 494 252 HOH HOH . J 6 HOH A 253 495 253 HOH HOH . J 6 HOH A 254 496 254 HOH HOH . J 6 HOH A 255 497 255 HOH HOH . J 6 HOH A 256 498 256 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . E 3 42.464 26.815 52.907 1 22.26 ? C ACT 3 A 1 HETATM 2 O O ACT . . . E 3 43.119 26.635 51.855 1 23.63 ? O ACT 3 A 1 HETATM 3 O OXT ACT . . . E 3 41.259 27.11 52.774 1 23.71 ? OXT ACT 3 A 1 HETATM 4 C CH3 ACT . . . E 3 43.091 26.69 54.265 1 23.92 ? CH3 ACT 3 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #