data_3NEG # _model_server_result.job_id uKg2FS008NTvcs9vsa5Sxw _model_server_result.datetime_utc '2024-10-20 21:01:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3neg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 3NEG # _exptl.entry_id 3NEG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 377.256 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-bromo-N-(pyridin-2-ylmethyl)naphthalene-1-sulfonamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3NEG _cell.length_a 130.23 _cell.length_b 130.23 _cell.length_c 88.25 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NEG _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C16 H13 Br N2 O2 S' _chem_comp.formula_weight 377.256 _chem_comp.id PYV _chem_comp.mon_nstd_flag . _chem_comp.name 4-bromo-N-(pyridin-2-ylmethyl)naphthalene-1-sulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Pyrabactin # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S N1 PYV sing 277 n n S O1 PYV doub 278 n n S O2 PYV doub 279 n n S C4 PYV sing 280 n n BR C1 PYV sing 281 n n C1 C2 PYV doub 282 n y C1 C6 PYV sing 283 n y N1 C11 PYV sing 284 n n C2 C3 PYV sing 285 n y C2 C10 PYV sing 286 n y N2 C12 PYV doub 287 n y N2 C13 PYV sing 288 n y C3 C4 PYV doub 289 n y C3 C7 PYV sing 290 n y C4 C5 PYV sing 291 n y C5 C6 PYV doub 292 n y C7 C8 PYV doub 293 n y C8 C9 PYV sing 294 n y C9 C10 PYV doub 295 n y C11 C12 PYV sing 296 n n C12 C16 PYV sing 297 n y C13 C14 PYV doub 298 n y C14 C15 PYV sing 299 n y C15 C16 PYV doub 300 n y N1 HN1 PYV sing 301 n n C5 H5 PYV sing 302 n n C6 H6 PYV sing 303 n n C7 H7 PYV sing 304 n n C8 H8 PYV sing 305 n n C9 H9 PYV sing 306 n n C10 H10 PYV sing 307 n n C11 H11 PYV sing 308 n n C11 H11A PYV sing 309 n n C13 H13 PYV sing 310 n n C14 H14 PYV sing 311 n n C15 H15 PYV sing 312 n n C16 H16 PYV sing 313 n n # _atom_sites.entry_id 3NEG _atom_sites.fract_transf_matrix[1][1] 0.007679 _atom_sites.fract_transf_matrix[1][2] 0.004433 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008867 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011331 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PYV A 1 201 1 PYV PRB . D 3 BR A 1 202 1 BR BR . E 2 PYV B 1 201 1 PYV PRB . F 4 HOH A 1 203 1 HOH HOH . F 4 HOH A 2 204 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S PYV . A . C 2 -55.737 40.493 -22.267 0.84 66.15 ? S PYV 201 A 1 HETATM 2 BR BR PYV . A . C 2 -61.75 40.836 -24.216 0.84 224.92 ? BR PYV 201 A 1 HETATM 3 C C1 PYV . A . C 2 -59.963 40.745 -23.631 0.84 45.27 ? C1 PYV 201 A 1 HETATM 4 N N1 PYV . A . C 2 -55.669 41.084 -20.795 0.84 56.5 ? N1 PYV 201 A 1 HETATM 5 O O1 PYV . A . C 2 -54.899 41.318 -23.083 0.84 66.4 ? O1 PYV 201 A 1 HETATM 6 C C2 PYV . A . C 2 -59.248 42.005 -23.292 0.84 50.61 ? C2 PYV 201 A 1 HETATM 7 N N2 PYV . A . C 2 -57.848 39.875 -18.149 0.84 53.61 ? N2 PYV 201 A 1 HETATM 8 O O2 PYV . A . C 2 -55.326 39.122 -22.299 0.84 68.81 ? O2 PYV 201 A 1 HETATM 9 C C3 PYV . A . C 2 -57.848 41.917 -22.857 0.84 50.58 ? C3 PYV 201 A 1 HETATM 10 C C4 PYV . A . C 2 -57.235 40.582 -22.768 0.84 47.97 ? C4 PYV 201 A 1 HETATM 11 C C5 PYV . A . C 2 -57.965 39.444 -23.116 0.84 47.3 ? C5 PYV 201 A 1 HETATM 12 C C6 PYV . A . C 2 -59.299 39.522 -23.541 0.84 44.84 ? C6 PYV 201 A 1 HETATM 13 C C7 PYV . A . C 2 -57.144 43.057 -22.527 0.84 55.68 ? C7 PYV 201 A 1 HETATM 14 C C8 PYV . A . C 2 -57.78 44.29 -22.621 0.84 59.04 ? C8 PYV 201 A 1 HETATM 15 C C9 PYV . A . C 2 -59.103 44.386 -23.038 0.84 58.97 ? C9 PYV 201 A 1 HETATM 16 C C10 PYV . A . C 2 -59.84 43.253 -23.371 0.84 56.42 ? C10 PYV 201 A 1 HETATM 17 C C11 PYV . A . C 2 -55.919 40.228 -19.657 0.84 56.65 ? C11 PYV 201 A 1 HETATM 18 C C12 PYV . A . C 2 -57.263 40.623 -19.102 0.84 54.26 ? C12 PYV 201 A 1 HETATM 19 C C13 PYV . A . C 2 -59.044 40.209 -17.657 0.84 52.16 ? C13 PYV 201 A 1 HETATM 20 C C14 PYV . A . C 2 -59.707 41.34 -18.105 0.84 50.22 ? C14 PYV 201 A 1 HETATM 21 C C15 PYV . A . C 2 -59.121 42.13 -19.07 0.84 50.77 ? C15 PYV 201 A 1 HETATM 22 C C16 PYV . A . C 2 -57.883 41.768 -19.574 0.84 52.21 ? C16 PYV 201 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 49 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #