data_3NEY # _model_server_result.job_id X-NXVWaQtlLRQaqzkkqxFA _model_server_result.datetime_utc '2025-02-05 10:55:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ney # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"KA","auth_seq_id":34}' # _entry.id 3NEY # _exptl.entry_id 3NEY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight ? _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'UNKNOWN ATOM OR ION' _entity.pdbx_number_of_molecules 31 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3NEY _cell.length_a 72.088 _cell.length_b 131.562 _cell.length_c 237.19 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NEY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 PISA monomeric 1 software_defined_assembly 4 PISA monomeric 1 software_defined_assembly 5 PISA monomeric 1 software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,H,I,J,K,L,M,N,O,XA 1 1 B,P,Q,R,S,T,U,V,W,X,Y,YA 2 1 C,Z,AA,BA,CA,DA,EA,FA,ZA 3 1 D,GA,HA,IA,JA,KA,LA,MA,AB 4 1 E,NA,OA,PA,QA,RA,BB 5 1 F,SA,TA,UA,VA,WA,CB 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 BA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N ? 3 IA N N ? 3 JA N N ? 3 KA N N ? 3 LA N N ? 3 MA N N ? 3 OA N N ? 3 PA N N ? 3 QA N N ? 3 RA N N ? 3 TA N N ? 3 UA N N ? 3 VA N N ? 3 WA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 191 A CYS 454 1_555 B SG CYS 191 B CYS 454 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? disulf ? disulf2 C SG CYS 191 C CYS 454 1_555 D SG CYS 191 D CYS 454 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? disulf ? disulf3 E SG CYS 191 F CYS 454 1_555 F SG CYS 191 E CYS 454 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? # _chem_comp.formula ? _chem_comp.formula_weight ? _chem_comp.id UNX _chem_comp.mon_nstd_flag . _chem_comp.name 'UNKNOWN ATOM OR ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3NEY _atom_sites.fract_transf_matrix[1][1] 0.013872 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007601 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004216 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 SO4 A 1 3 3 SO4 SO4 . H 2 SO4 A 1 4 4 SO4 SO4 . I 3 UNX A 1 7 7 UNX UNX . J 3 UNX A 1 8 8 UNX UNX . K 3 UNX A 1 12 12 UNX UNX . L 3 UNX A 1 13 13 UNX UNX . M 3 UNX A 1 15 15 UNX UNX . N 3 UNX A 1 21 21 UNX UNX . O 3 UNX A 1 25 25 UNX UNX . P 2 SO4 B 1 5 5 SO4 SO4 . Q 2 SO4 B 1 6 6 SO4 SO4 . R 2 SO4 B 1 7 7 SO4 SO4 . S 2 SO4 B 1 8 8 SO4 SO4 . T 3 UNX B 1 4 4 UNX UNX . U 3 UNX B 1 9 9 UNX UNX . V 3 UNX B 1 10 10 UNX UNX . W 3 UNX B 1 11 11 UNX UNX . X 3 UNX B 1 22 22 UNX UNX . Y 3 UNX B 1 26 26 UNX UNX . Z 2 SO4 C 1 1 1 SO4 SO4 . AA 2 SO4 C 1 9 9 SO4 SO4 . BA 3 UNX C 1 14 14 UNX UNX . CA 3 UNX C 1 23 23 UNX UNX . DA 3 UNX C 1 24 24 UNX UNX . EA 3 UNX C 1 30 30 UNX UNX . FA 3 UNX C 1 32 32 UNX UNX . GA 2 SO4 D 1 2 2 SO4 SO4 . HA 2 SO4 D 1 10 10 SO4 SO4 . IA 3 UNX D 1 27 27 UNX UNX . JA 3 UNX D 1 33 33 UNX UNX . KA 3 UNX D 1 34 34 UNX UNX . LA 3 UNX D 1 35 35 UNX UNX . MA 3 UNX D 1 36 36 UNX UNX . NA 2 SO4 F 1 11 11 SO4 SO4 . OA 3 UNX F 1 6 6 UNX UNX . PA 3 UNX F 1 29 29 UNX UNX . QA 3 UNX F 1 37 37 UNX UNX . RA 3 UNX F 1 38 38 UNX UNX . SA 2 SO4 E 1 12 12 SO4 SO4 . TA 3 UNX E 1 28 28 UNX UNX . UA 3 UNX E 1 31 31 UNX UNX . VA 3 UNX E 1 39 39 UNX UNX . WA 3 UNX E 1 20 20 UNX UNX . XA 4 HOH A 1 5 5 HOH HOH . XA 4 HOH A 2 16 16 HOH HOH . XA 4 HOH A 3 22 22 HOH HOH . XA 4 HOH A 4 27 27 HOH HOH . XA 4 HOH A 5 39 39 HOH HOH . XA 4 HOH A 6 48 48 HOH HOH . XA 4 HOH A 7 50 50 HOH HOH . XA 4 HOH A 8 85 85 HOH HOH . XA 4 HOH A 9 89 89 HOH HOH . XA 4 HOH A 10 90 90 HOH HOH . XA 4 HOH A 11 94 94 HOH HOH . XA 4 HOH A 12 101 101 HOH HOH . XA 4 HOH A 13 105 105 HOH HOH . XA 4 HOH A 14 110 110 HOH HOH . XA 4 HOH A 15 116 116 HOH HOH . XA 4 HOH A 16 121 121 HOH HOH . XA 4 HOH A 17 123 123 HOH HOH . XA 4 HOH A 18 146 146 HOH HOH . XA 4 HOH A 19 148 148 HOH HOH . XA 4 HOH A 20 157 157 HOH HOH . XA 4 HOH A 21 158 158 HOH HOH . XA 4 HOH A 22 169 169 HOH HOH . XA 4 HOH A 23 173 173 HOH HOH . XA 4 HOH A 24 175 175 HOH HOH . XA 4 HOH A 25 177 177 HOH HOH . XA 4 HOH A 26 178 178 HOH HOH . XA 4 HOH A 27 190 190 HOH HOH . XA 4 HOH A 28 461 3 HOH HOH . XA 4 HOH A 29 462 12 HOH HOH . YA 4 HOH B 1 15 15 HOH HOH . YA 4 HOH B 2 29 29 HOH HOH . YA 4 HOH B 3 32 32 HOH HOH . YA 4 HOH B 4 41 41 HOH HOH . YA 4 HOH B 5 49 49 HOH HOH . YA 4 HOH B 6 55 55 HOH HOH . YA 4 HOH B 7 56 56 HOH HOH . YA 4 HOH B 8 60 60 HOH HOH . YA 4 HOH B 9 61 61 HOH HOH . YA 4 HOH B 10 63 63 HOH HOH . YA 4 HOH B 11 67 67 HOH HOH . YA 4 HOH B 12 76 76 HOH HOH . YA 4 HOH B 13 77 77 HOH HOH . YA 4 HOH B 14 79 79 HOH HOH . YA 4 HOH B 15 81 81 HOH HOH . YA 4 HOH B 16 83 83 HOH HOH . YA 4 HOH B 17 93 93 HOH HOH . YA 4 HOH B 18 99 99 HOH HOH . YA 4 HOH B 19 100 100 HOH HOH . YA 4 HOH B 20 103 103 HOH HOH . YA 4 HOH B 21 109 109 HOH HOH . YA 4 HOH B 22 112 112 HOH HOH . YA 4 HOH B 23 113 113 HOH HOH . YA 4 HOH B 24 120 120 HOH HOH . YA 4 HOH B 25 122 122 HOH HOH . YA 4 HOH B 26 126 126 HOH HOH . YA 4 HOH B 27 127 127 HOH HOH . YA 4 HOH B 28 131 131 HOH HOH . YA 4 HOH B 29 132 132 HOH HOH . YA 4 HOH B 30 142 142 HOH HOH . YA 4 HOH B 31 143 143 HOH HOH . YA 4 HOH B 32 145 145 HOH HOH . YA 4 HOH B 33 159 159 HOH HOH . YA 4 HOH B 34 170 170 HOH HOH . YA 4 HOH B 35 171 171 HOH HOH . YA 4 HOH B 36 176 176 HOH HOH . YA 4 HOH B 37 179 179 HOH HOH . YA 4 HOH B 38 180 180 HOH HOH . YA 4 HOH B 39 181 181 HOH HOH . YA 4 HOH B 40 182 182 HOH HOH . YA 4 HOH B 41 195 195 HOH HOH . YA 4 HOH B 42 201 201 HOH HOH . YA 4 HOH B 43 461 6 HOH HOH . YA 4 HOH B 44 462 7 HOH HOH . YA 4 HOH B 45 463 10 HOH HOH . ZA 4 HOH C 1 8 8 HOH HOH . ZA 4 HOH C 2 13 13 HOH HOH . ZA 4 HOH C 3 17 17 HOH HOH . ZA 4 HOH C 4 19 19 HOH HOH . ZA 4 HOH C 5 28 28 HOH HOH . ZA 4 HOH C 6 33 33 HOH HOH . ZA 4 HOH C 7 37 37 HOH HOH . ZA 4 HOH C 8 38 38 HOH HOH . ZA 4 HOH C 9 51 51 HOH HOH . ZA 4 HOH C 10 59 59 HOH HOH . ZA 4 HOH C 11 62 62 HOH HOH . ZA 4 HOH C 12 64 64 HOH HOH . ZA 4 HOH C 13 68 68 HOH HOH . ZA 4 HOH C 14 69 69 HOH HOH . ZA 4 HOH C 15 72 72 HOH HOH . ZA 4 HOH C 16 91 91 HOH HOH . ZA 4 HOH C 17 92 92 HOH HOH . ZA 4 HOH C 18 115 115 HOH HOH . ZA 4 HOH C 19 117 117 HOH HOH . ZA 4 HOH C 20 118 118 HOH HOH . ZA 4 HOH C 21 119 119 HOH HOH . ZA 4 HOH C 22 128 128 HOH HOH . ZA 4 HOH C 23 130 130 HOH HOH . ZA 4 HOH C 24 133 133 HOH HOH . ZA 4 HOH C 25 137 137 HOH HOH . ZA 4 HOH C 26 150 150 HOH HOH . ZA 4 HOH C 27 152 152 HOH HOH . ZA 4 HOH C 28 160 160 HOH HOH . ZA 4 HOH C 29 166 166 HOH HOH . ZA 4 HOH C 30 172 172 HOH HOH . ZA 4 HOH C 31 183 183 HOH HOH . ZA 4 HOH C 32 184 184 HOH HOH . ZA 4 HOH C 33 196 196 HOH HOH . ZA 4 HOH C 34 198 198 HOH HOH . ZA 4 HOH C 35 199 199 HOH HOH . ZA 4 HOH C 36 461 30 HOH HOH . AB 4 HOH D 1 1 1 HOH HOH . AB 4 HOH D 2 4 4 HOH HOH . AB 4 HOH D 3 14 14 HOH HOH . AB 4 HOH D 4 18 18 HOH HOH . AB 4 HOH D 5 21 21 HOH HOH . AB 4 HOH D 6 23 23 HOH HOH . AB 4 HOH D 7 24 24 HOH HOH . AB 4 HOH D 8 25 25 HOH HOH . AB 4 HOH D 9 44 44 HOH HOH . AB 4 HOH D 10 47 47 HOH HOH . AB 4 HOH D 11 53 53 HOH HOH . AB 4 HOH D 12 86 86 HOH HOH . AB 4 HOH D 13 95 95 HOH HOH . AB 4 HOH D 14 104 104 HOH HOH . AB 4 HOH D 15 107 107 HOH HOH . AB 4 HOH D 16 111 111 HOH HOH . AB 4 HOH D 17 114 114 HOH HOH . AB 4 HOH D 18 129 129 HOH HOH . AB 4 HOH D 19 134 134 HOH HOH . AB 4 HOH D 20 140 140 HOH HOH . AB 4 HOH D 21 144 144 HOH HOH . AB 4 HOH D 22 151 151 HOH HOH . AB 4 HOH D 23 154 154 HOH HOH . AB 4 HOH D 24 156 156 HOH HOH . AB 4 HOH D 25 162 162 HOH HOH . AB 4 HOH D 26 163 163 HOH HOH . AB 4 HOH D 27 167 167 HOH HOH . AB 4 HOH D 28 168 168 HOH HOH . AB 4 HOH D 29 185 185 HOH HOH . AB 4 HOH D 30 200 200 HOH HOH . AB 4 HOH D 31 461 34 HOH HOH . AB 4 HOH D 32 462 36 HOH HOH . BB 4 HOH F 1 20 20 HOH HOH . BB 4 HOH F 2 26 26 HOH HOH . BB 4 HOH F 3 31 31 HOH HOH . BB 4 HOH F 4 42 42 HOH HOH . BB 4 HOH F 5 46 46 HOH HOH . BB 4 HOH F 6 52 52 HOH HOH . BB 4 HOH F 7 54 54 HOH HOH . BB 4 HOH F 8 57 57 HOH HOH . BB 4 HOH F 9 65 65 HOH HOH . BB 4 HOH F 10 66 66 HOH HOH . BB 4 HOH F 11 70 70 HOH HOH . BB 4 HOH F 12 71 71 HOH HOH . BB 4 HOH F 13 74 74 HOH HOH . BB 4 HOH F 14 75 75 HOH HOH . BB 4 HOH F 15 80 80 HOH HOH . BB 4 HOH F 16 82 82 HOH HOH . BB 4 HOH F 17 84 84 HOH HOH . BB 4 HOH F 18 87 87 HOH HOH . BB 4 HOH F 19 88 88 HOH HOH . BB 4 HOH F 20 98 98 HOH HOH . BB 4 HOH F 21 102 102 HOH HOH . BB 4 HOH F 22 106 106 HOH HOH . BB 4 HOH F 23 108 108 HOH HOH . BB 4 HOH F 24 124 124 HOH HOH . BB 4 HOH F 25 125 125 HOH HOH . BB 4 HOH F 26 135 135 HOH HOH . BB 4 HOH F 27 136 136 HOH HOH . BB 4 HOH F 28 138 138 HOH HOH . BB 4 HOH F 29 141 141 HOH HOH . BB 4 HOH F 30 147 147 HOH HOH . BB 4 HOH F 31 153 153 HOH HOH . BB 4 HOH F 32 155 155 HOH HOH . BB 4 HOH F 33 165 165 HOH HOH . BB 4 HOH F 34 174 174 HOH HOH . BB 4 HOH F 35 186 186 HOH HOH . BB 4 HOH F 36 191 191 HOH HOH . BB 4 HOH F 37 461 11 HOH HOH . CB 4 HOH E 1 2 2 HOH HOH . CB 4 HOH E 2 9 9 HOH HOH . CB 4 HOH E 3 35 35 HOH HOH . CB 4 HOH E 4 40 40 HOH HOH . CB 4 HOH E 5 43 43 HOH HOH . CB 4 HOH E 6 45 45 HOH HOH . CB 4 HOH E 7 58 58 HOH HOH . CB 4 HOH E 8 73 73 HOH HOH . CB 4 HOH E 9 78 78 HOH HOH . CB 4 HOH E 10 96 96 HOH HOH . CB 4 HOH E 11 97 97 HOH HOH . CB 4 HOH E 12 139 139 HOH HOH . CB 4 HOH E 13 149 149 HOH HOH . CB 4 HOH E 14 161 161 HOH HOH . CB 4 HOH E 15 164 164 HOH HOH . CB 4 HOH E 16 187 187 HOH HOH . CB 4 HOH E 17 188 188 HOH HOH . CB 4 HOH E 18 189 189 HOH HOH . CB 4 HOH E 19 192 192 HOH HOH . CB 4 HOH E 20 193 193 HOH HOH . CB 4 HOH E 21 194 194 HOH HOH . CB 4 HOH E 22 197 197 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol X _atom_site.label_atom_id UNK _atom_site.label_comp_id UNX _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id KA _atom_site.label_entity_id 3 _atom_site.Cartn_x 56.892 _atom_site.Cartn_y 79.729 _atom_site.Cartn_z 1.49 _atom_site.occupancy 0.01 _atom_site.B_iso_or_equiv 2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id UNK _atom_site.auth_comp_id UNX _atom_site.auth_seq_id 34 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #