data_3NF7
#
_model_server_result.job_id            r-uywIkio57C67FSqRTqBw 
_model_server_result.datetime_utc      '2024-11-08 06:12:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3nf7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":221}' 
#
_entry.id    3NF7 
#
_exptl.entry_id    3NF7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              345.734 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5-[(5-chloro-2-oxo-2,3-dihydro-1H-indol-1-yl)methyl]-1,3-benzodioxole-4-carboxylic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3NF7 
_cell.length_a            71.333 
_cell.length_b            71.333 
_cell.length_c            66.915 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3NF7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 N N N 
? 5 W N N 
#
_chem_comp.formula           'C17 H12 Cl N O5' 
_chem_comp.formula_weight    345.734 
_chem_comp.id                CIW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5-[(5-chloro-2-oxo-2,3-dihydro-1H-indol-1-yl)methyl]-1,3-benzodioxole-4-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 CIW doub 77 n y 
C1 C6 CIW sing 78 n y 
C1 CL24 CIW sing 79 n n 
C2 C3 CIW sing 80 n y 
C3 C4 CIW doub 81 n y 
C4 C5 CIW sing 82 n y 
C4 N10 CIW sing 83 n n 
C5 C6 CIW doub 84 n y 
C5 C7 CIW sing 85 n n 
C7 C8 CIW sing 86 n n 
C8 O9 CIW doub 87 n n 
C8 N10 CIW sing 88 n n 
N10 C11 CIW sing 89 n n 
C11 C12 CIW sing 90 n n 
C12 C13 CIW doub 91 n y 
C12 C17 CIW sing 92 n y 
C13 C14 CIW sing 93 n y 
C14 C15 CIW doub 94 n y 
C15 C16 CIW sing 95 n y 
C15 O23 CIW sing 96 n n 
C16 C17 CIW doub 97 n y 
C16 O21 CIW sing 98 n n 
C17 C18 CIW sing 99 n n 
C18 O19 CIW doub 100 n n 
C18 O20 CIW sing 101 n n 
O21 C22 CIW sing 102 n n 
C22 O23 CIW sing 103 n n 
C2 H2 CIW sing 104 n n 
C3 H3 CIW sing 105 n n 
C6 H6 CIW sing 106 n n 
C7 H7 CIW sing 107 n n 
C7 H7A CIW sing 108 n n 
C11 H11 CIW sing 109 n n 
C11 H11A CIW sing 110 n n 
C13 H13 CIW sing 111 n n 
C14 H14 CIW sing 112 n n 
C22 H22 CIW sing 113 n n 
C22 H22A CIW sing 114 n n 
O20 H20 CIW sing 115 n n 
#
_atom_sites.entry_id                     3NF7 
_atom_sites.fract_transf_matrix[1][1]    0.014019 
_atom_sites.fract_transf_matrix[1][2]    0.008094 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016187 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014944 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 2 2 SO4 SO4 . 
D 2 SO4 A 1 4 4 SO4 SO4 . 
E 2 SO4 A 1 5 5 SO4 SO4 . 
F 2 SO4 A 1 7 7 SO4 SO4 . 
G 2 SO4 A 1 9 9 SO4 SO4 . 
H 3 ACY A 1 1 1 ACY ACY . 
I 3 ACY A 1 213 2 ACY ACY . 
J 3 ACY A 1 214 4 ACY ACY . 
K 3 ACY A 1 215 7 ACY ACY . 
L 3 ACY A 1 8 8 ACY ACY . 
M 4 EDO A 1 216 2 EDO EDO . 
N 5 CIW A 1 221 221 CIW UNL . 
O 2 SO4 B 1 1 1 SO4 SO4 . 
P 2 SO4 B 1 3 3 SO4 SO4 . 
Q 2 SO4 B 1 6 6 SO4 SO4 . 
R 2 SO4 B 1 8 8 SO4 SO4 . 
S 2 SO4 B 1 10 10 SO4 SO4 . 
T 3 ACY B 1 213 3 ACY ACY . 
U 3 ACY B 1 5 5 ACY ACY . 
V 4 EDO B 1 214 1 EDO EDO . 
W 5 CIW B 1 215 210 CIW UNL . 
X 6 HOH A 1 3 3 HOH HOH . 
X 6 HOH A 2 6 6 HOH HOH . 
X 6 HOH A 3 12 12 HOH HOH . 
X 6 HOH A 4 16 16 HOH HOH . 
X 6 HOH A 5 18 18 HOH HOH . 
X 6 HOH A 6 19 19 HOH HOH . 
X 6 HOH A 7 20 20 HOH HOH . 
X 6 HOH A 8 21 21 HOH HOH . 
X 6 HOH A 9 24 24 HOH HOH . 
X 6 HOH A 10 25 25 HOH HOH . 
X 6 HOH A 11 26 26 HOH HOH . 
X 6 HOH A 12 29 29 HOH HOH . 
X 6 HOH A 13 217 4 HOH HOH . 
X 6 HOH A 14 218 8 HOH HOH . 
X 6 HOH A 15 219 9 HOH HOH . 
X 6 HOH A 16 220 31 HOH HOH . 
X 6 HOH A 17 222 34 HOH HOH . 
X 6 HOH A 18 223 35 HOH HOH . 
X 6 HOH A 19 224 38 HOH HOH . 
X 6 HOH A 20 225 39 HOH HOH . 
X 6 HOH A 21 226 42 HOH HOH . 
X 6 HOH A 22 227 43 HOH HOH . 
X 6 HOH A 23 228 44 HOH HOH . 
X 6 HOH A 24 229 46 HOH HOH . 
X 6 HOH A 25 230 47 HOH HOH . 
X 6 HOH A 26 231 48 HOH HOH . 
X 6 HOH A 27 232 52 HOH HOH . 
X 6 HOH A 28 233 56 HOH HOH . 
X 6 HOH A 29 234 60 HOH HOH . 
X 6 HOH A 30 235 64 HOH HOH . 
X 6 HOH A 31 236 67 HOH HOH . 
X 6 HOH A 32 237 68 HOH HOH . 
X 6 HOH A 33 238 69 HOH HOH . 
X 6 HOH A 34 239 70 HOH HOH . 
X 6 HOH A 35 240 75 HOH HOH . 
X 6 HOH A 36 241 80 HOH HOH . 
X 6 HOH A 37 242 81 HOH HOH . 
X 6 HOH A 38 243 84 HOH HOH . 
X 6 HOH A 39 244 87 HOH HOH . 
X 6 HOH A 40 245 88 HOH HOH . 
X 6 HOH A 41 246 89 HOH HOH . 
X 6 HOH A 42 247 91 HOH HOH . 
X 6 HOH A 43 248 93 HOH HOH . 
X 6 HOH A 44 249 94 HOH HOH . 
X 6 HOH A 45 250 97 HOH HOH . 
X 6 HOH A 46 251 98 HOH HOH . 
X 6 HOH A 47 252 99 HOH HOH . 
X 6 HOH A 48 253 103 HOH HOH . 
X 6 HOH A 49 254 105 HOH HOH . 
X 6 HOH A 50 255 106 HOH HOH . 
X 6 HOH A 51 256 107 HOH HOH . 
X 6 HOH A 52 257 108 HOH HOH . 
X 6 HOH A 53 258 109 HOH HOH . 
X 6 HOH A 54 259 110 HOH HOH . 
X 6 HOH A 55 260 111 HOH HOH . 
X 6 HOH A 56 261 151 HOH HOH . 
X 6 HOH A 57 262 113 HOH HOH . 
X 6 HOH A 58 263 118 HOH HOH . 
X 6 HOH A 59 264 121 HOH HOH . 
X 6 HOH A 60 265 122 HOH HOH . 
X 6 HOH A 61 266 126 HOH HOH . 
X 6 HOH A 62 267 127 HOH HOH . 
X 6 HOH A 63 268 128 HOH HOH . 
X 6 HOH A 64 269 129 HOH HOH . 
X 6 HOH A 65 270 131 HOH HOH . 
X 6 HOH A 66 271 132 HOH HOH . 
X 6 HOH A 67 272 134 HOH HOH . 
X 6 HOH A 68 273 135 HOH HOH . 
X 6 HOH A 69 274 137 HOH HOH . 
X 6 HOH A 70 275 138 HOH HOH . 
X 6 HOH A 71 276 139 HOH HOH . 
X 6 HOH A 72 277 141 HOH HOH . 
X 6 HOH A 73 278 142 HOH HOH . 
X 6 HOH A 74 279 143 HOH HOH . 
X 6 HOH A 75 280 146 HOH HOH . 
X 6 HOH A 76 281 147 HOH HOH . 
X 6 HOH A 77 282 149 HOH HOH . 
X 6 HOH A 78 283 155 HOH HOH . 
X 6 HOH A 79 284 157 HOH HOH . 
X 6 HOH A 80 285 162 HOH HOH . 
X 6 HOH A 81 286 163 HOH HOH . 
X 6 HOH A 82 287 165 HOH HOH . 
X 6 HOH A 83 288 167 HOH HOH . 
X 6 HOH A 84 289 168 HOH HOH . 
X 6 HOH A 85 290 154 HOH HOH . 
Y 6 HOH B 1 2 2 HOH HOH . 
Y 6 HOH B 2 7 7 HOH HOH . 
Y 6 HOH B 3 11 11 HOH HOH . 
Y 6 HOH B 4 13 13 HOH HOH . 
Y 6 HOH B 5 14 14 HOH HOH . 
Y 6 HOH B 6 15 15 HOH HOH . 
Y 6 HOH B 7 17 17 HOH HOH . 
Y 6 HOH B 8 22 22 HOH HOH . 
Y 6 HOH B 9 23 23 HOH HOH . 
Y 6 HOH B 10 27 27 HOH HOH . 
Y 6 HOH B 11 28 28 HOH HOH . 
Y 6 HOH B 12 216 1 HOH HOH . 
Y 6 HOH B 13 217 5 HOH HOH . 
Y 6 HOH B 14 218 10 HOH HOH . 
Y 6 HOH B 15 219 30 HOH HOH . 
Y 6 HOH B 16 220 32 HOH HOH . 
Y 6 HOH B 17 221 33 HOH HOH . 
Y 6 HOH B 18 222 36 HOH HOH . 
Y 6 HOH B 19 223 37 HOH HOH . 
Y 6 HOH B 20 224 40 HOH HOH . 
Y 6 HOH B 21 225 41 HOH HOH . 
Y 6 HOH B 22 226 45 HOH HOH . 
Y 6 HOH B 23 227 49 HOH HOH . 
Y 6 HOH B 24 228 50 HOH HOH . 
Y 6 HOH B 25 229 51 HOH HOH . 
Y 6 HOH B 26 230 53 HOH HOH . 
Y 6 HOH B 27 231 54 HOH HOH . 
Y 6 HOH B 28 232 55 HOH HOH . 
Y 6 HOH B 29 233 57 HOH HOH . 
Y 6 HOH B 30 234 58 HOH HOH . 
Y 6 HOH B 31 235 59 HOH HOH . 
Y 6 HOH B 32 236 61 HOH HOH . 
Y 6 HOH B 33 237 62 HOH HOH . 
Y 6 HOH B 34 238 63 HOH HOH . 
Y 6 HOH B 35 239 65 HOH HOH . 
Y 6 HOH B 36 240 66 HOH HOH . 
Y 6 HOH B 37 241 71 HOH HOH . 
Y 6 HOH B 38 242 72 HOH HOH . 
Y 6 HOH B 39 243 73 HOH HOH . 
Y 6 HOH B 40 244 74 HOH HOH . 
Y 6 HOH B 41 245 76 HOH HOH . 
Y 6 HOH B 42 246 77 HOH HOH . 
Y 6 HOH B 43 247 78 HOH HOH . 
Y 6 HOH B 44 248 79 HOH HOH . 
Y 6 HOH B 45 249 82 HOH HOH . 
Y 6 HOH B 46 250 83 HOH HOH . 
Y 6 HOH B 47 251 85 HOH HOH . 
Y 6 HOH B 48 252 86 HOH HOH . 
Y 6 HOH B 49 253 90 HOH HOH . 
Y 6 HOH B 50 254 92 HOH HOH . 
Y 6 HOH B 51 255 95 HOH HOH . 
Y 6 HOH B 52 256 96 HOH HOH . 
Y 6 HOH B 53 257 100 HOH HOH . 
Y 6 HOH B 54 258 101 HOH HOH . 
Y 6 HOH B 55 259 102 HOH HOH . 
Y 6 HOH B 56 260 104 HOH HOH . 
Y 6 HOH B 57 261 112 HOH HOH . 
Y 6 HOH B 58 262 115 HOH HOH . 
Y 6 HOH B 59 263 116 HOH HOH . 
Y 6 HOH B 60 264 117 HOH HOH . 
Y 6 HOH B 61 265 119 HOH HOH . 
Y 6 HOH B 62 266 120 HOH HOH . 
Y 6 HOH B 63 267 123 HOH HOH . 
Y 6 HOH B 64 268 124 HOH HOH . 
Y 6 HOH B 65 269 125 HOH HOH . 
Y 6 HOH B 66 270 130 HOH HOH . 
Y 6 HOH B 67 271 133 HOH HOH . 
Y 6 HOH B 68 272 136 HOH HOH . 
Y 6 HOH B 69 273 140 HOH HOH . 
Y 6 HOH B 70 274 144 HOH HOH . 
Y 6 HOH B 71 275 145 HOH HOH . 
Y 6 HOH B 72 276 148 HOH HOH . 
Y 6 HOH B 73 277 150 HOH HOH . 
Y 6 HOH B 74 278 114 HOH HOH . 
Y 6 HOH B 75 279 152 HOH HOH . 
Y 6 HOH B 76 280 153 HOH HOH . 
Y 6 HOH B 77 282 156 HOH HOH . 
Y 6 HOH B 78 283 158 HOH HOH . 
Y 6 HOH B 79 284 159 HOH HOH . 
Y 6 HOH B 80 285 160 HOH HOH . 
Y 6 HOH B 81 286 161 HOH HOH . 
Y 6 HOH B 82 287 164 HOH HOH . 
Y 6 HOH B 83 288 166 HOH HOH . 
Y 6 HOH B 84 289 169 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIW . . . N 5 6.214 -28.759 -8.722 0.7 30.63 ? C1 CIW 221 A 1 
HETATM 2 C C2 CIW . . . N 5 7.345 -29.211 -9.356 0.7 33.24 ? C2 CIW 221 A 1 
HETATM 3 C C3 CIW . . . N 5 8.29 -28.337 -9.845 0.7 30.73 ? C3 CIW 221 A 1 
HETATM 4 C C4 CIW . . . N 5 8.022 -27.007 -9.649 0.7 33.11 ? C4 CIW 221 A 1 
HETATM 5 C C5 CIW . . . N 5 6.901 -26.535 -9.023 0.7 32.87 ? C5 CIW 221 A 1 
HETATM 6 C C6 CIW . . . N 5 5.961 -27.415 -8.542 0.7 35.77 ? C6 CIW 221 A 1 
HETATM 7 C C7 CIW . . . N 5 6.888 -25.062 -8.993 0.7 34.73 ? C7 CIW 221 A 1 
HETATM 8 C C8 CIW . . . N 5 8.197 -24.747 -9.665 0.7 34.31 ? C8 CIW 221 A 1 
HETATM 9 O O9 CIW . . . N 5 8.663 -23.626 -9.776 0.7 34.7 ? O9 CIW 221 A 1 
HETATM 10 N N10 CIW . . . N 5 8.795 -25.944 -10.045 0.7 32.63 ? N10 CIW 221 A 1 
HETATM 11 C C11 CIW . . . N 5 9.724 -26.066 -11.123 0.7 34.42 ? C11 CIW 221 A 1 
HETATM 12 C C12 CIW . . . N 5 11.013 -26.557 -10.578 0.7 38.05 ? C12 CIW 221 A 1 
HETATM 13 C C13 CIW . . . N 5 11.093 -26.775 -9.202 0.7 35.79 ? C13 CIW 221 A 1 
HETATM 14 C C14 CIW . . . N 5 12.253 -27.257 -8.635 0.7 35.19 ? C14 CIW 221 A 1 
HETATM 15 C C15 CIW . . . N 5 13.316 -27.488 -9.483 0.7 37.92 ? C15 CIW 221 A 1 
HETATM 16 C C16 CIW . . . N 5 13.22 -27.259 -10.825 0.7 37.36 ? C16 CIW 221 A 1 
HETATM 17 C C17 CIW . . . N 5 12.086 -26.793 -11.427 0.7 37.25 ? C17 CIW 221 A 1 
HETATM 18 C C18 CIW . . . N 5 12.11 -26.603 -12.92 0.7 41.35 ? C18 CIW 221 A 1 
HETATM 19 O O19 CIW . . . N 5 12.859 -25.698 -13.346 0.7 46.12 ? O19 CIW 221 A 1 
HETATM 20 O O20 CIW . . . N 5 11.452 -27.338 -13.691 0.7 42.36 ? O20 CIW 221 A 1 
HETATM 21 O O21 CIW . . . N 5 14.377 -27.577 -11.484 0.7 34.7 ? O21 CIW 221 A 1 
HETATM 22 C C22 CIW . . . N 5 15.219 -28.088 -10.448 0.7 35.37 ? C22 CIW 221 A 1 
HETATM 23 O O23 CIW . . . N 5 14.582 -27.975 -9.15 0.7 38.95 ? O23 CIW 221 A 1 
HETATM 24 CL CL24 CIW . . . N 5 5.093 -29.899 -8.11 0.7 38.89 ? CL24 CIW 221 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           24 
#