data_3NF8 # _model_server_result.job_id -wK78epu2QrRvhllB88TmQ _model_server_result.datetime_utc '2024-11-22 21:55:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nf8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":2}' # _entry.id 3NF8 # _exptl.entry_id 3NF8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3NF8 _cell.length_a 71.549 _cell.length_b 71.549 _cell.length_c 67.099 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NF8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 P N N # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 3NF8 _atom_sites.fract_transf_matrix[1][1] 0.013976 _atom_sites.fract_transf_matrix[1][2] 0.008069 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016139 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014903 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 2 2 SO4 SO4 . D 2 SO4 A 1 4 4 SO4 SO4 . E 2 SO4 A 1 5 5 SO4 SO4 . F 3 CDQ A 1 225 225 CDQ UNL . G 3 CDQ A 1 247 247 CDQ UNL . H 3 CDQ A 1 267 267 CDQ UNL . I 3 CDQ A 1 277 277 CDQ UNL . J 4 ACY A 1 1 1 ACY ACY . K 2 SO4 B 1 1 1 SO4 SO4 . L 2 SO4 B 1 3 3 SO4 SO4 . M 2 SO4 B 1 6 6 SO4 SO4 . N 3 CDQ B 1 235 235 CDQ UNL . O 3 CDQ B 1 257 257 CDQ UNL . P 4 ACY B 1 2 2 ACY ACY . Q 5 HOH A 1 6 6 HOH HOH . Q 5 HOH A 2 7 7 HOH HOH . Q 5 HOH A 3 11 11 HOH HOH . Q 5 HOH A 4 12 12 HOH HOH . Q 5 HOH A 5 14 14 HOH HOH . Q 5 HOH A 6 15 15 HOH HOH . Q 5 HOH A 7 17 17 HOH HOH . Q 5 HOH A 8 18 18 HOH HOH . Q 5 HOH A 9 19 19 HOH HOH . Q 5 HOH A 10 22 22 HOH HOH . Q 5 HOH A 11 26 26 HOH HOH . Q 5 HOH A 12 27 27 HOH HOH . Q 5 HOH A 13 29 29 HOH HOH . Q 5 HOH A 14 213 1 HOH HOH . Q 5 HOH A 15 214 4 HOH HOH . Q 5 HOH A 16 215 31 HOH HOH . Q 5 HOH A 17 216 32 HOH HOH . Q 5 HOH A 18 217 34 HOH HOH . Q 5 HOH A 19 218 39 HOH HOH . Q 5 HOH A 20 219 40 HOH HOH . Q 5 HOH A 21 220 41 HOH HOH . Q 5 HOH A 22 221 43 HOH HOH . Q 5 HOH A 23 222 45 HOH HOH . Q 5 HOH A 24 223 47 HOH HOH . Q 5 HOH A 25 224 52 HOH HOH . Q 5 HOH A 26 226 53 HOH HOH . Q 5 HOH A 27 227 54 HOH HOH . Q 5 HOH A 28 228 57 HOH HOH . Q 5 HOH A 29 229 58 HOH HOH . Q 5 HOH A 30 230 59 HOH HOH . Q 5 HOH A 31 231 61 HOH HOH . Q 5 HOH A 32 232 62 HOH HOH . Q 5 HOH A 33 233 68 HOH HOH . Q 5 HOH A 34 234 69 HOH HOH . Q 5 HOH A 35 235 70 HOH HOH . Q 5 HOH A 36 236 71 HOH HOH . Q 5 HOH A 37 237 72 HOH HOH . Q 5 HOH A 38 238 73 HOH HOH . Q 5 HOH A 39 239 78 HOH HOH . Q 5 HOH A 40 240 80 HOH HOH . Q 5 HOH A 41 241 81 HOH HOH . Q 5 HOH A 42 242 82 HOH HOH . Q 5 HOH A 43 243 83 HOH HOH . Q 5 HOH A 44 244 84 HOH HOH . Q 5 HOH A 45 245 85 HOH HOH . Q 5 HOH A 46 246 90 HOH HOH . Q 5 HOH A 47 248 91 HOH HOH . Q 5 HOH A 48 249 93 HOH HOH . Q 5 HOH A 49 250 95 HOH HOH . Q 5 HOH A 50 251 96 HOH HOH . Q 5 HOH A 51 252 97 HOH HOH . R 5 HOH B 1 5 5 HOH HOH . R 5 HOH B 2 8 8 HOH HOH . R 5 HOH B 3 9 9 HOH HOH . R 5 HOH B 4 10 10 HOH HOH . R 5 HOH B 5 13 13 HOH HOH . R 5 HOH B 6 16 16 HOH HOH . R 5 HOH B 7 20 20 HOH HOH . R 5 HOH B 8 21 21 HOH HOH . R 5 HOH B 9 23 23 HOH HOH . R 5 HOH B 10 24 24 HOH HOH . R 5 HOH B 11 25 25 HOH HOH . R 5 HOH B 12 28 28 HOH HOH . R 5 HOH B 13 213 2 HOH HOH . R 5 HOH B 14 214 3 HOH HOH . R 5 HOH B 15 215 30 HOH HOH . R 5 HOH B 16 216 33 HOH HOH . R 5 HOH B 17 217 35 HOH HOH . R 5 HOH B 18 218 36 HOH HOH . R 5 HOH B 19 219 37 HOH HOH . R 5 HOH B 20 220 38 HOH HOH . R 5 HOH B 21 221 42 HOH HOH . R 5 HOH B 22 222 44 HOH HOH . R 5 HOH B 23 223 46 HOH HOH . R 5 HOH B 24 224 48 HOH HOH . R 5 HOH B 25 225 49 HOH HOH . R 5 HOH B 26 226 50 HOH HOH . R 5 HOH B 27 227 51 HOH HOH . R 5 HOH B 28 228 55 HOH HOH . R 5 HOH B 29 229 56 HOH HOH . R 5 HOH B 30 230 60 HOH HOH . R 5 HOH B 31 231 63 HOH HOH . R 5 HOH B 32 232 64 HOH HOH . R 5 HOH B 33 233 65 HOH HOH . R 5 HOH B 34 234 66 HOH HOH . R 5 HOH B 35 236 67 HOH HOH . R 5 HOH B 36 237 74 HOH HOH . R 5 HOH B 37 238 75 HOH HOH . R 5 HOH B 38 239 76 HOH HOH . R 5 HOH B 39 240 77 HOH HOH . R 5 HOH B 40 241 79 HOH HOH . R 5 HOH B 41 242 86 HOH HOH . R 5 HOH B 42 243 87 HOH HOH . R 5 HOH B 43 244 88 HOH HOH . R 5 HOH B 44 245 89 HOH HOH . R 5 HOH B 45 246 92 HOH HOH . R 5 HOH B 46 247 94 HOH HOH . R 5 HOH B 47 248 98 HOH HOH . R 5 HOH B 48 249 99 HOH HOH . R 5 HOH B 49 250 100 HOH HOH . R 5 HOH B 50 251 101 HOH HOH . R 5 HOH B 51 252 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . P 4 20.836 -30.848 8.046 1 46.03 ? C ACY 2 B 1 HETATM 2 O O ACY . . . P 4 21.335 -31.887 7.555 1 46.61 ? O ACY 2 B 1 HETATM 3 O OXT ACY . . . P 4 19.921 -30.913 8.912 1 44.79 ? OXT ACY 2 B 1 HETATM 4 C CH3 ACY . . . P 4 21.364 -29.492 7.59 1 45.51 ? CH3 ACY 2 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #