data_3NFZ # _model_server_result.job_id u8cvGOCQkIJLoI0P3zIGCQ _model_server_result.datetime_utc '2025-08-31 08:13:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nfz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":322}' # _entry.id 3NFZ # _exptl.entry_id 3NFZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 223.225 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-acetyl-L-tyrosine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3NFZ _cell.length_a 93.498 _cell.length_b 93.498 _cell.length_c 98.037 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NFZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 46.749 -80.971643 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 30 A HIS 21 1_555 B ZN ZN . A ZN 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc2 A OE1 GLU 33 A GLU 24 1_555 B ZN ZN . A ZN 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc3 A OE2 GLU 33 A GLU 24 1_555 B ZN ZN . A ZN 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc4 A ND1 HIS 125 A HIS 116 1_555 B ZN ZN . A ZN 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc5 B ZN ZN . A ZN 319 1_555 E O1 3NF . A 3NF 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? # _chem_comp.formula 'C11 H13 N O4' _chem_comp.formula_weight 223.225 _chem_comp.id 3NF _chem_comp.mon_nstd_flag n _chem_comp.name N-acetyl-L-tyrosine _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 O1 3NF doub 1 n n C3 C2 3NF sing 2 n n N4 C2 3NF sing 3 n n C3 H3 3NF sing 4 n n C3 H3A 3NF sing 5 n n C3 H3B 3NF sing 6 n n N4 C5 3NF sing 7 n n N4 H2 3NF sing 8 n n C9 C5 3NF sing 9 n n C5 C6 3NF sing 10 n n C5 H5 3NF sing 11 n n O7 C6 3NF doub 12 n n C6 OXT 3NF sing 13 n n OXT HXT 3NF sing 14 n n C9 C10 3NF sing 15 n n C9 H9 3NF sing 16 n n C9 H9A 3NF sing 17 n n C10 C15 3NF doub 18 n y C10 C11 3NF sing 19 n y C11 C12 3NF doub 20 n y C11 H11 3NF sing 21 n n C12 C13 3NF sing 22 n y C12 H12 3NF sing 23 n n C14 C13 3NF doub 24 n y C13 O16 3NF sing 25 n n C15 C14 3NF sing 26 n y C14 H14 3NF sing 27 n n C15 H15 3NF sing 28 n n O16 HO16 3NF sing 29 n n # _atom_sites.entry_id 3NFZ _atom_sites.fract_transf_matrix[1][1] 0.010695 _atom_sites.fract_transf_matrix[1][2] 0.006175 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01235 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0102 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 319 319 ZN ZN . C 3 CL A 1 320 320 CL CL . D 3 CL A 1 321 321 CL CL . E 4 3NF A 1 322 322 3NF 3NF . F 5 HOH A 1 323 323 HOH HOH . F 5 HOH A 2 324 324 HOH HOH . F 5 HOH A 3 325 325 HOH HOH . F 5 HOH A 4 326 326 HOH HOH . F 5 HOH A 5 327 327 HOH HOH . F 5 HOH A 6 328 328 HOH HOH . F 5 HOH A 7 329 329 HOH HOH . F 5 HOH A 8 330 330 HOH HOH . F 5 HOH A 9 331 331 HOH HOH . F 5 HOH A 10 332 332 HOH HOH . F 5 HOH A 11 333 333 HOH HOH . F 5 HOH A 12 334 334 HOH HOH . F 5 HOH A 13 335 335 HOH HOH . F 5 HOH A 14 336 336 HOH HOH . F 5 HOH A 15 337 337 HOH HOH . F 5 HOH A 16 338 338 HOH HOH . F 5 HOH A 17 339 339 HOH HOH . F 5 HOH A 18 340 340 HOH HOH . F 5 HOH A 19 341 341 HOH HOH . F 5 HOH A 20 342 342 HOH HOH . F 5 HOH A 21 343 343 HOH HOH . F 5 HOH A 22 344 344 HOH HOH . F 5 HOH A 23 345 345 HOH HOH . F 5 HOH A 24 346 346 HOH HOH . F 5 HOH A 25 347 347 HOH HOH . F 5 HOH A 26 348 348 HOH HOH . F 5 HOH A 27 349 349 HOH HOH . F 5 HOH A 28 350 350 HOH HOH . F 5 HOH A 29 351 351 HOH HOH . F 5 HOH A 30 352 352 HOH HOH . F 5 HOH A 31 353 353 HOH HOH . F 5 HOH A 32 354 354 HOH HOH . F 5 HOH A 33 355 355 HOH HOH . F 5 HOH A 34 356 356 HOH HOH . F 5 HOH A 35 357 357 HOH HOH . F 5 HOH A 36 358 358 HOH HOH . F 5 HOH A 37 359 359 HOH HOH . F 5 HOH A 38 360 360 HOH HOH . F 5 HOH A 39 361 361 HOH HOH . F 5 HOH A 40 362 362 HOH HOH . F 5 HOH A 41 363 363 HOH HOH . F 5 HOH A 42 364 364 HOH HOH . F 5 HOH A 43 365 365 HOH HOH . F 5 HOH A 44 366 366 HOH HOH . F 5 HOH A 45 367 367 HOH HOH . F 5 HOH A 46 368 368 HOH HOH . F 5 HOH A 47 369 369 HOH HOH . F 5 HOH A 48 370 370 HOH HOH . F 5 HOH A 49 371 371 HOH HOH . F 5 HOH A 50 372 372 HOH HOH . F 5 HOH A 51 373 373 HOH HOH . F 5 HOH A 52 374 374 HOH HOH . F 5 HOH A 53 375 375 HOH HOH . F 5 HOH A 54 376 376 HOH HOH . F 5 HOH A 55 377 377 HOH HOH . F 5 HOH A 56 378 378 HOH HOH . F 5 HOH A 57 379 379 HOH HOH . F 5 HOH A 58 380 380 HOH HOH . F 5 HOH A 59 381 381 HOH HOH . F 5 HOH A 60 382 382 HOH HOH . F 5 HOH A 61 383 383 HOH HOH . F 5 HOH A 62 384 384 HOH HOH . F 5 HOH A 63 385 385 HOH HOH . F 5 HOH A 64 386 386 HOH HOH . F 5 HOH A 65 387 387 HOH HOH . F 5 HOH A 66 388 388 HOH HOH . F 5 HOH A 67 389 389 HOH HOH . F 5 HOH A 68 390 390 HOH HOH . F 5 HOH A 69 391 391 HOH HOH . F 5 HOH A 70 392 392 HOH HOH . F 5 HOH A 71 393 393 HOH HOH . F 5 HOH A 72 394 394 HOH HOH . F 5 HOH A 73 395 395 HOH HOH . F 5 HOH A 74 396 396 HOH HOH . F 5 HOH A 75 397 397 HOH HOH . F 5 HOH A 76 398 398 HOH HOH . F 5 HOH A 77 399 399 HOH HOH . F 5 HOH A 78 400 400 HOH HOH . F 5 HOH A 79 401 401 HOH HOH . F 5 HOH A 80 402 402 HOH HOH . F 5 HOH A 81 403 403 HOH HOH . F 5 HOH A 82 404 404 HOH HOH . F 5 HOH A 83 405 405 HOH HOH . F 5 HOH A 84 406 406 HOH HOH . F 5 HOH A 85 407 407 HOH HOH . F 5 HOH A 86 408 408 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 3NF . . . E 4 12.832 -34.568 10.065 1 31.2 ? O1 3NF 322 A 1 HETATM 2 C C2 3NF . . . E 4 12.467 -34.943 8.96 1 38.28 ? C2 3NF 322 A 1 HETATM 3 C C3 3NF . . . E 4 13.27 -35.881 8.105 1 37.03 ? C3 3NF 322 A 1 HETATM 4 N N4 3NF . . . E 4 11.314 -34.536 8.446 1 35.95 ? N4 3NF 322 A 1 HETATM 5 C C5 3NF . . . E 4 10.511 -33.553 9.146 1 41.64 ? C5 3NF 322 A 1 HETATM 6 C C6 3NF . . . E 4 9.912 -34.135 10.408 1 41.62 ? C6 3NF 322 A 1 HETATM 7 O O7 3NF . . . E 4 9.506 -35.32 10.391 1 36.23 ? O7 3NF 322 A 1 HETATM 8 O OXT 3NF . . . E 4 9.843 -33.431 11.445 1 29.72 ? OXT 3NF 322 A 1 HETATM 9 C C9 3NF . . . E 4 9.493 -33.015 8.135 1 38.97 ? C9 3NF 322 A 1 HETATM 10 C C10 3NF . . . E 4 8.323 -32.282 8.743 1 35.26 ? C10 3NF 322 A 1 HETATM 11 C C11 3NF . . . E 4 7.267 -33.025 9.24 1 40.68 ? C11 3NF 322 A 1 HETATM 12 C C12 3NF . . . E 4 6.172 -32.382 9.794 1 45.84 ? C12 3NF 322 A 1 HETATM 13 C C13 3NF . . . E 4 6.13 -30.998 9.837 1 45.55 ? C13 3NF 322 A 1 HETATM 14 C C14 3NF . . . E 4 7.178 -30.238 9.332 1 40.37 ? C14 3NF 322 A 1 HETATM 15 C C15 3NF . . . E 4 8.283 -30.888 8.781 1 37.56 ? C15 3NF 322 A 1 HETATM 16 O O16 3NF . . . E 4 5.04 -30.406 10.383 1 60.42 ? O16 3NF 322 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 16 #