data_3NGA # _model_server_result.job_id KT3E75t4UCWv9VSdp-61Og _model_server_result.datetime_utc '2024-10-12 17:21:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nga # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1000}' # _entry.id 3NGA # _exptl.entry_id 3NGA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 349.77 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3NGA _cell.length_a 127.64 _cell.length_b 127.64 _cell.length_c 125.75 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NGA _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,L 1 1 B,H,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 H N N # _chem_comp.formula 'C19 H12 Cl N3 O2' _chem_comp.formula_weight 349.77 _chem_comp.id 3NG _chem_comp.mon_nstd_flag . _chem_comp.name '5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 3NG doub 1 n y C1 N9 3NG sing 2 n y C1 C6 3NG sing 3 n y C2 C3 3NG sing 4 n y C8 C2 3NG sing 5 n y C3 C4 3NG doub 6 n y C3 H3 3NG sing 7 n n C4 C5 3NG sing 8 n y C4 H4 3NG sing 9 n n C5 C6 3NG doub 10 n y C5 C23 3NG sing 11 n n C6 H6 3NG sing 12 n n C14 C7 3NG sing 13 n y C10 C7 3NG sing 14 n y C7 C8 3NG doub 15 n y C8 C13 3NG sing 16 n y C10 N9 3NG doub 17 n y N15 C10 3NG sing 18 n n C14 C11 3NG doub 19 n y C11 N12 3NG sing 20 n y C11 H11 3NG sing 21 n n N12 C13 3NG doub 22 n y C13 H13 3NG sing 23 n n C14 H14 3NG sing 24 n n C16 N15 3NG sing 25 n n N15 HN15 3NG sing 26 n n C21 C16 3NG doub 27 n y C16 C17 3NG sing 28 n y C18 C17 3NG doub 29 n y C17 H17 3NG sing 30 n n C19 C18 3NG sing 31 n y C18 CL22 3NG sing 32 n n C20 C19 3NG doub 33 n y C19 H19 3NG sing 34 n n C20 C21 3NG sing 35 n y C20 H20 3NG sing 36 n n C21 H21 3NG sing 37 n n O24 C23 3NG doub 38 n n C23 O25 3NG sing 39 n n O25 HO25 3NG sing 40 n n # _atom_sites.entry_id 3NGA _atom_sites.fract_transf_matrix[1][1] 0.007835 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007835 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007952 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3NG A 1 1000 1000 3NG 3NG . D 3 SO4 A 1 3000 3000 SO4 SO4 . E 3 SO4 A 1 3001 3001 SO4 SO4 . F 3 SO4 A 1 3005 3005 SO4 SO4 . G 3 SO4 A 1 3007 3007 SO4 SO4 . H 2 3NG B 1 1000 1000 3NG 3NG . I 3 SO4 B 1 3002 3002 SO4 SO4 . J 3 SO4 B 1 3003 3003 SO4 SO4 . K 3 SO4 B 1 3004 3004 SO4 SO4 . L 4 HOH A 1 334 13 HOH HOH . L 4 HOH A 2 335 15 HOH HOH . L 4 HOH A 3 336 16 HOH HOH . L 4 HOH A 4 337 17 HOH HOH . L 4 HOH A 5 338 19 HOH HOH . L 4 HOH A 6 339 20 HOH HOH . L 4 HOH A 7 340 22 HOH HOH . L 4 HOH A 8 341 23 HOH HOH . L 4 HOH A 9 342 24 HOH HOH . L 4 HOH A 10 343 25 HOH HOH . L 4 HOH A 11 344 26 HOH HOH . L 4 HOH A 12 345 27 HOH HOH . L 4 HOH A 13 346 28 HOH HOH . L 4 HOH A 14 347 29 HOH HOH . L 4 HOH A 15 348 30 HOH HOH . L 4 HOH A 16 349 37 HOH HOH . L 4 HOH A 17 350 40 HOH HOH . L 4 HOH A 18 351 41 HOH HOH . L 4 HOH A 19 352 47 HOH HOH . L 4 HOH A 20 353 48 HOH HOH . L 4 HOH A 21 354 49 HOH HOH . L 4 HOH A 22 355 50 HOH HOH . L 4 HOH A 23 356 52 HOH HOH . L 4 HOH A 24 357 57 HOH HOH . L 4 HOH A 25 358 60 HOH HOH . L 4 HOH A 26 359 61 HOH HOH . L 4 HOH A 27 360 64 HOH HOH . L 4 HOH A 28 361 67 HOH HOH . L 4 HOH A 29 362 69 HOH HOH . L 4 HOH A 30 363 70 HOH HOH . L 4 HOH A 31 364 71 HOH HOH . L 4 HOH A 32 365 72 HOH HOH . L 4 HOH A 33 366 80 HOH HOH . L 4 HOH A 34 367 81 HOH HOH . L 4 HOH A 35 368 88 HOH HOH . L 4 HOH A 36 369 89 HOH HOH . L 4 HOH A 37 370 90 HOH HOH . L 4 HOH A 38 371 91 HOH HOH . L 4 HOH A 39 372 92 HOH HOH . L 4 HOH A 40 373 93 HOH HOH . L 4 HOH A 41 374 99 HOH HOH . L 4 HOH A 42 375 100 HOH HOH . L 4 HOH A 43 376 101 HOH HOH . L 4 HOH A 44 377 102 HOH HOH . L 4 HOH A 45 378 104 HOH HOH . L 4 HOH A 46 379 108 HOH HOH . L 4 HOH A 47 380 109 HOH HOH . L 4 HOH A 48 381 112 HOH HOH . L 4 HOH A 49 382 114 HOH HOH . L 4 HOH A 50 383 115 HOH HOH . L 4 HOH A 51 384 8 HOH HOH . M 4 HOH B 1 334 2 HOH HOH . M 4 HOH B 2 335 3 HOH HOH . M 4 HOH B 3 336 4 HOH HOH . M 4 HOH B 4 337 5 HOH HOH . M 4 HOH B 5 338 6 HOH HOH . M 4 HOH B 6 339 7 HOH HOH . M 4 HOH B 7 340 9 HOH HOH . M 4 HOH B 8 341 10 HOH HOH . M 4 HOH B 9 342 11 HOH HOH . M 4 HOH B 10 343 12 HOH HOH . M 4 HOH B 11 344 14 HOH HOH . M 4 HOH B 12 345 18 HOH HOH . M 4 HOH B 13 346 21 HOH HOH . M 4 HOH B 14 347 31 HOH HOH . M 4 HOH B 15 348 32 HOH HOH . M 4 HOH B 16 349 33 HOH HOH . M 4 HOH B 17 350 34 HOH HOH . M 4 HOH B 18 351 35 HOH HOH . M 4 HOH B 19 352 36 HOH HOH . M 4 HOH B 20 353 38 HOH HOH . M 4 HOH B 21 354 39 HOH HOH . M 4 HOH B 22 355 42 HOH HOH . M 4 HOH B 23 356 43 HOH HOH . M 4 HOH B 24 357 44 HOH HOH . M 4 HOH B 25 358 45 HOH HOH . M 4 HOH B 26 359 46 HOH HOH . M 4 HOH B 27 360 51 HOH HOH . M 4 HOH B 28 361 53 HOH HOH . M 4 HOH B 29 362 54 HOH HOH . M 4 HOH B 30 363 55 HOH HOH . M 4 HOH B 31 364 56 HOH HOH . M 4 HOH B 32 365 58 HOH HOH . M 4 HOH B 33 366 59 HOH HOH . M 4 HOH B 34 367 62 HOH HOH . M 4 HOH B 35 368 63 HOH HOH . M 4 HOH B 36 369 65 HOH HOH . M 4 HOH B 37 370 66 HOH HOH . M 4 HOH B 38 371 68 HOH HOH . M 4 HOH B 39 372 73 HOH HOH . M 4 HOH B 40 373 74 HOH HOH . M 4 HOH B 41 374 75 HOH HOH . M 4 HOH B 42 375 76 HOH HOH . M 4 HOH B 43 376 77 HOH HOH . M 4 HOH B 44 377 78 HOH HOH . M 4 HOH B 45 378 79 HOH HOH . M 4 HOH B 46 379 82 HOH HOH . M 4 HOH B 47 380 83 HOH HOH . M 4 HOH B 48 381 84 HOH HOH . M 4 HOH B 49 382 85 HOH HOH . M 4 HOH B 50 383 86 HOH HOH . M 4 HOH B 51 384 87 HOH HOH . M 4 HOH B 52 385 94 HOH HOH . M 4 HOH B 53 386 95 HOH HOH . M 4 HOH B 54 387 96 HOH HOH . M 4 HOH B 55 388 97 HOH HOH . M 4 HOH B 56 389 98 HOH HOH . M 4 HOH B 57 390 103 HOH HOH . M 4 HOH B 58 391 105 HOH HOH . M 4 HOH B 59 392 106 HOH HOH . M 4 HOH B 60 393 107 HOH HOH . M 4 HOH B 61 394 110 HOH HOH . M 4 HOH B 62 395 111 HOH HOH . M 4 HOH B 63 396 113 HOH HOH . M 4 HOH B 64 397 116 HOH HOH . M 4 HOH B 65 398 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3NG . . . H 2 45.323 -4.154 97.96 1 35.53 ? C1 3NG 1000 B 1 HETATM 2 C C2 3NG . . . H 2 44.332 -4.985 98.518 1 37.13 ? C2 3NG 1000 B 1 HETATM 3 C C3 3NG . . . H 2 44.076 -4.917 99.904 1 35.24 ? C3 3NG 1000 B 1 HETATM 4 C C4 3NG . . . H 2 44.775 -4.038 100.719 1 32.82 ? C4 3NG 1000 B 1 HETATM 5 C C5 3NG . . . H 2 45.752 -3.212 100.176 1 32.59 ? C5 3NG 1000 B 1 HETATM 6 C C6 3NG . . . H 2 46.04 -3.291 98.81 1 34.1 ? C6 3NG 1000 B 1 HETATM 7 C C7 3NG . . . H 2 43.963 -5.828 96.26 1 44.7 ? C7 3NG 1000 B 1 HETATM 8 C C8 3NG . . . H 2 43.645 -5.858 97.638 1 40.01 ? C8 3NG 1000 B 1 HETATM 9 N N9 3NG . . . H 2 45.627 -4.145 96.657 1 38.95 ? N9 3NG 1000 B 1 HETATM 10 C C10 3NG . . . H 2 44.988 -4.934 95.808 1 44.8 ? C10 3NG 1000 B 1 HETATM 11 C C11 3NG . . . H 2 42.271 -7.513 95.887 1 46.53 ? C11 3NG 1000 B 1 HETATM 12 N N12 3NG . . . H 2 41.956 -7.586 97.194 1 46.97 ? N12 3NG 1000 B 1 HETATM 13 C C13 3NG . . . H 2 42.625 -6.743 98.027 1 42.41 ? C13 3NG 1000 B 1 HETATM 14 C C14 3NG . . . H 2 43.253 -6.686 95.377 1 44.25 ? C14 3NG 1000 B 1 HETATM 15 N N15 3NG . . . H 2 45.315 -4.898 94.498 1 47.21 ? N15 3NG 1000 B 1 HETATM 16 C C16 3NG . . . H 2 46.255 -4.161 93.79 1 50.9 ? C16 3NG 1000 B 1 HETATM 17 C C17 3NG . . . H 2 47.512 -3.83 94.271 1 56.09 ? C17 3NG 1000 B 1 HETATM 18 C C18 3NG . . . H 2 48.369 -3.097 93.456 1 64.02 ? C18 3NG 1000 B 1 HETATM 19 C C19 3NG . . . H 2 48.013 -2.708 92.167 1 54.32 ? C19 3NG 1000 B 1 HETATM 20 C C20 3NG . . . H 2 46.763 -3.043 91.688 1 51.34 ? C20 3NG 1000 B 1 HETATM 21 C C21 3NG . . . H 2 45.901 -3.788 92.484 1 51.68 ? C21 3NG 1000 B 1 HETATM 22 CL CL22 3NG . . . H 2 49.899 -2.66 94.062 1 79.69 ? CL22 3NG 1000 B 1 HETATM 23 C C23 3NG . . . H 2 46.487 -2.241 101.019 1 32.1 ? C23 3NG 1000 B 1 HETATM 24 O O24 3NG . . . H 2 47.579 -1.811 100.523 1 34.13 ? O24 3NG 1000 B 1 HETATM 25 O O25 3NG . . . H 2 45.937 -1.894 102.12 1 29.9 ? O25 3NG 1000 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #