data_3NIQ
#
_model_server_result.job_id            KQlv9JGer088nDM0FxY18w 
_model_server_result.datetime_utc      '2024-11-09 02:36:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3niq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1601}' 
#
_entry.id    3NIQ 
#
_exptl.entry_id    3NIQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3NIQ 
_cell.length_a            123.961 
_cell.length_b            123.961 
_cell.length_c            123.961 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3NIQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        198 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 
3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A ND1 HIS 126 A HIS 126 1_555 D MN MN . A MN 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
metalc ? metalc2 A OD2 ASP 148 A ASP 148 1_555 D MN MN . A MN 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? 
metalc ? metalc3 A OD1 ASP 148 A ASP 148 1_555 E MN MN . A MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc4 A ND1 HIS 150 A HIS 150 1_555 E MN MN . A MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? 
metalc ? metalc5 A OD2 ASP 152 A ASP 152 1_555 D MN MN . A MN 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? 
metalc ? metalc6 A OD2 ASP 240 A ASP 240 1_555 D MN MN . A MN 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? 
metalc ? metalc7 A OD2 ASP 240 A ASP 240 1_555 E MN MN . A MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc8 A OD2 ASP 242 A ASP 242 1_555 E MN MN . A MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? 
metalc ? metalc9 A OD1 ASP 242 A ASP 242 1_555 E MN MN . A MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? 
metalc ? metalc10 H O HOH . A HOH 367 1_555 D MN MN . A MN 1601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? 
metalc ? metalc11 H O HOH . A HOH 367 1_555 E MN MN . A MN 1602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? 
metalc ? metalc12 B ND1 HIS 126 B HIS 126 1_555 F MN MN . B MN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc13 B OD2 ASP 148 B ASP 148 1_555 F MN MN . B MN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc14 B OD1 ASP 148 B ASP 148 1_555 G MN MN . B MN 1604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? 
metalc ? metalc15 B ND1 HIS 150 B HIS 150 1_555 G MN MN . B MN 1604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc16 B OD2 ASP 152 B ASP 152 1_555 F MN MN . B MN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? 
metalc ? metalc17 B OD2 ASP 240 B ASP 240 1_555 F MN MN . B MN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc18 B OD2 ASP 240 B ASP 240 1_555 G MN MN . B MN 1604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? 
metalc ? metalc19 B OD2 ASP 242 B ASP 242 1_555 G MN MN . B MN 1604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc20 B OD1 ASP 242 B ASP 242 1_555 G MN MN . B MN 1604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? 
metalc ? metalc21 I O HOH . B HOH 371 1_555 F MN MN . B MN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc22 I O HOH . B HOH 371 1_555 G MN MN . B MN 1604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3NIQ 
_atom_sites.fract_transf_matrix[1][1]    0.008067 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008067 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008067 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 1205 1205 GOL GOL . 
D 3 MN A 1 1601 1601 MN MN . 
E 3 MN A 1 1602 1602 MN MN . 
F 3 MN B 1 1603 1603 MN MN . 
G 3 MN B 1 1604 1604 MN MN . 
H 4 HOH A 1 327 327 HOH HOH . 
H 4 HOH A 2 328 328 HOH HOH . 
H 4 HOH A 3 329 329 HOH HOH . 
H 4 HOH A 4 330 330 HOH HOH . 
H 4 HOH A 5 331 331 HOH HOH . 
H 4 HOH A 6 332 332 HOH HOH . 
H 4 HOH A 7 333 333 HOH HOH . 
H 4 HOH A 8 334 334 HOH HOH . 
H 4 HOH A 9 335 335 HOH HOH . 
H 4 HOH A 10 336 336 HOH HOH . 
H 4 HOH A 11 337 337 HOH HOH . 
H 4 HOH A 12 338 338 HOH HOH . 
H 4 HOH A 13 339 339 HOH HOH . 
H 4 HOH A 14 340 340 HOH HOH . 
H 4 HOH A 15 341 341 HOH HOH . 
H 4 HOH A 16 342 342 HOH HOH . 
H 4 HOH A 17 343 343 HOH HOH . 
H 4 HOH A 18 344 344 HOH HOH . 
H 4 HOH A 19 345 345 HOH HOH . 
H 4 HOH A 20 346 346 HOH HOH . 
H 4 HOH A 21 347 347 HOH HOH . 
H 4 HOH A 22 348 348 HOH HOH . 
H 4 HOH A 23 349 349 HOH HOH . 
H 4 HOH A 24 350 350 HOH HOH . 
H 4 HOH A 25 351 351 HOH HOH . 
H 4 HOH A 26 352 352 HOH HOH . 
H 4 HOH A 27 353 353 HOH HOH . 
H 4 HOH A 28 354 354 HOH HOH . 
H 4 HOH A 29 355 355 HOH HOH . 
H 4 HOH A 30 356 356 HOH HOH . 
H 4 HOH A 31 357 357 HOH HOH . 
H 4 HOH A 32 358 358 HOH HOH . 
H 4 HOH A 33 359 359 HOH HOH . 
H 4 HOH A 34 360 360 HOH HOH . 
H 4 HOH A 35 361 361 HOH HOH . 
H 4 HOH A 36 362 362 HOH HOH . 
H 4 HOH A 37 363 363 HOH HOH . 
H 4 HOH A 38 364 364 HOH HOH . 
H 4 HOH A 39 365 365 HOH HOH . 
H 4 HOH A 40 366 366 HOH HOH . 
H 4 HOH A 41 367 367 HOH HOH . 
H 4 HOH A 42 368 368 HOH HOH . 
H 4 HOH A 43 369 369 HOH HOH . 
H 4 HOH A 44 370 370 HOH HOH . 
H 4 HOH A 45 371 371 HOH HOH . 
H 4 HOH A 46 372 372 HOH HOH . 
H 4 HOH A 47 373 373 HOH HOH . 
H 4 HOH A 48 374 374 HOH HOH . 
H 4 HOH A 49 375 375 HOH HOH . 
H 4 HOH A 50 376 376 HOH HOH . 
H 4 HOH A 51 377 377 HOH HOH . 
H 4 HOH A 52 378 378 HOH HOH . 
H 4 HOH A 53 379 379 HOH HOH . 
H 4 HOH A 54 380 380 HOH HOH . 
H 4 HOH A 55 381 381 HOH HOH . 
H 4 HOH A 56 382 382 HOH HOH . 
H 4 HOH A 57 383 383 HOH HOH . 
H 4 HOH A 58 384 384 HOH HOH . 
H 4 HOH A 59 385 385 HOH HOH . 
H 4 HOH A 60 386 386 HOH HOH . 
H 4 HOH A 61 387 387 HOH HOH . 
H 4 HOH A 62 388 388 HOH HOH . 
H 4 HOH A 63 389 389 HOH HOH . 
H 4 HOH A 64 390 390 HOH HOH . 
H 4 HOH A 65 391 391 HOH HOH . 
H 4 HOH A 66 392 392 HOH HOH . 
H 4 HOH A 67 393 393 HOH HOH . 
H 4 HOH A 68 394 394 HOH HOH . 
H 4 HOH A 69 395 395 HOH HOH . 
H 4 HOH A 70 396 396 HOH HOH . 
H 4 HOH A 71 397 397 HOH HOH . 
H 4 HOH A 72 398 398 HOH HOH . 
H 4 HOH A 73 399 399 HOH HOH . 
H 4 HOH A 74 400 400 HOH HOH . 
H 4 HOH A 75 401 401 HOH HOH . 
H 4 HOH A 76 402 402 HOH HOH . 
H 4 HOH A 77 403 403 HOH HOH . 
H 4 HOH A 78 404 404 HOH HOH . 
H 4 HOH A 79 405 405 HOH HOH . 
H 4 HOH A 80 406 406 HOH HOH . 
H 4 HOH A 81 407 407 HOH HOH . 
H 4 HOH A 82 408 408 HOH HOH . 
H 4 HOH A 83 409 409 HOH HOH . 
H 4 HOH A 84 410 410 HOH HOH . 
H 4 HOH A 85 411 411 HOH HOH . 
H 4 HOH A 86 412 412 HOH HOH . 
H 4 HOH A 87 413 413 HOH HOH . 
H 4 HOH A 88 414 414 HOH HOH . 
H 4 HOH A 89 415 415 HOH HOH . 
H 4 HOH A 90 416 416 HOH HOH . 
H 4 HOH A 91 417 417 HOH HOH . 
H 4 HOH A 92 418 418 HOH HOH . 
H 4 HOH A 93 419 419 HOH HOH . 
H 4 HOH A 94 420 420 HOH HOH . 
H 4 HOH A 95 421 421 HOH HOH . 
H 4 HOH A 96 422 422 HOH HOH . 
H 4 HOH A 97 423 423 HOH HOH . 
H 4 HOH A 98 424 424 HOH HOH . 
H 4 HOH A 99 425 425 HOH HOH . 
H 4 HOH A 100 426 426 HOH HOH . 
H 4 HOH A 101 427 427 HOH HOH . 
H 4 HOH A 102 428 428 HOH HOH . 
H 4 HOH A 103 429 429 HOH HOH . 
H 4 HOH A 104 430 430 HOH HOH . 
H 4 HOH A 105 431 431 HOH HOH . 
H 4 HOH A 106 432 432 HOH HOH . 
H 4 HOH A 107 433 433 HOH HOH . 
H 4 HOH A 108 434 434 HOH HOH . 
H 4 HOH A 109 435 435 HOH HOH . 
H 4 HOH A 110 436 436 HOH HOH . 
H 4 HOH A 111 437 437 HOH HOH . 
H 4 HOH A 112 438 438 HOH HOH . 
H 4 HOH A 113 439 439 HOH HOH . 
H 4 HOH A 114 440 440 HOH HOH . 
H 4 HOH A 115 441 441 HOH HOH . 
H 4 HOH A 116 442 442 HOH HOH . 
H 4 HOH A 117 443 443 HOH HOH . 
H 4 HOH A 118 444 444 HOH HOH . 
H 4 HOH A 119 445 445 HOH HOH . 
I 4 HOH B 1 327 327 HOH HOH . 
I 4 HOH B 2 328 328 HOH HOH . 
I 4 HOH B 3 329 329 HOH HOH . 
I 4 HOH B 4 330 330 HOH HOH . 
I 4 HOH B 5 331 331 HOH HOH . 
I 4 HOH B 6 332 332 HOH HOH . 
I 4 HOH B 7 333 333 HOH HOH . 
I 4 HOH B 8 334 334 HOH HOH . 
I 4 HOH B 9 335 335 HOH HOH . 
I 4 HOH B 10 336 336 HOH HOH . 
I 4 HOH B 11 337 337 HOH HOH . 
I 4 HOH B 12 338 338 HOH HOH . 
I 4 HOH B 13 339 339 HOH HOH . 
I 4 HOH B 14 340 340 HOH HOH . 
I 4 HOH B 15 341 341 HOH HOH . 
I 4 HOH B 16 342 342 HOH HOH . 
I 4 HOH B 17 343 343 HOH HOH . 
I 4 HOH B 18 344 344 HOH HOH . 
I 4 HOH B 19 345 345 HOH HOH . 
I 4 HOH B 20 346 346 HOH HOH . 
I 4 HOH B 21 347 347 HOH HOH . 
I 4 HOH B 22 348 348 HOH HOH . 
I 4 HOH B 23 349 349 HOH HOH . 
I 4 HOH B 24 350 350 HOH HOH . 
I 4 HOH B 25 351 351 HOH HOH . 
I 4 HOH B 26 352 352 HOH HOH . 
I 4 HOH B 27 353 353 HOH HOH . 
I 4 HOH B 28 354 354 HOH HOH . 
I 4 HOH B 29 355 355 HOH HOH . 
I 4 HOH B 30 356 356 HOH HOH . 
I 4 HOH B 31 357 357 HOH HOH . 
I 4 HOH B 32 358 358 HOH HOH . 
I 4 HOH B 33 359 359 HOH HOH . 
I 4 HOH B 34 360 360 HOH HOH . 
I 4 HOH B 35 361 361 HOH HOH . 
I 4 HOH B 36 362 362 HOH HOH . 
I 4 HOH B 37 363 363 HOH HOH . 
I 4 HOH B 38 364 364 HOH HOH . 
I 4 HOH B 39 365 365 HOH HOH . 
I 4 HOH B 40 366 366 HOH HOH . 
I 4 HOH B 41 367 367 HOH HOH . 
I 4 HOH B 42 368 368 HOH HOH . 
I 4 HOH B 43 369 369 HOH HOH . 
I 4 HOH B 44 370 370 HOH HOH . 
I 4 HOH B 45 371 371 HOH HOH . 
I 4 HOH B 46 372 372 HOH HOH . 
I 4 HOH B 47 373 373 HOH HOH . 
I 4 HOH B 48 374 374 HOH HOH . 
I 4 HOH B 49 375 375 HOH HOH . 
I 4 HOH B 50 376 376 HOH HOH . 
I 4 HOH B 51 377 377 HOH HOH . 
I 4 HOH B 52 378 378 HOH HOH . 
I 4 HOH B 53 379 379 HOH HOH . 
I 4 HOH B 54 380 380 HOH HOH . 
I 4 HOH B 55 381 381 HOH HOH . 
I 4 HOH B 56 382 382 HOH HOH . 
I 4 HOH B 57 383 383 HOH HOH . 
I 4 HOH B 58 384 384 HOH HOH . 
I 4 HOH B 59 385 385 HOH HOH . 
I 4 HOH B 60 386 386 HOH HOH . 
I 4 HOH B 61 387 387 HOH HOH . 
I 4 HOH B 62 388 388 HOH HOH . 
I 4 HOH B 63 389 389 HOH HOH . 
I 4 HOH B 64 390 390 HOH HOH . 
I 4 HOH B 65 391 391 HOH HOH . 
I 4 HOH B 66 392 392 HOH HOH . 
I 4 HOH B 67 393 393 HOH HOH . 
I 4 HOH B 68 409 409 HOH HOH . 
I 4 HOH B 69 410 410 HOH HOH . 
I 4 HOH B 70 413 413 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -18.705 
_atom_site.Cartn_y               -4.11 
_atom_site.Cartn_z               -33.363 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        24.47 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           1601 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#