data_3NJ8 # _model_server_result.job_id Yg92GtYmMW_vG37LU_PS6Q _model_server_result.datetime_utc '2024-12-29 02:53:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nj8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 3NJ8 # _exptl.entry_id 3NJ8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 287.741 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-chloro-4-(2-hydroxy-4-propylphenoxy)benzonitrile _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3NJ8 _cell.length_a 78.256 _cell.length_b 78.256 _cell.length_c 189.077 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NJ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_765 -x+2,-x+y+1,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 117.384 67.771684 126.051333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C16 H14 Cl N O2' _chem_comp.formula_weight 287.741 _chem_comp.id NJ8 _chem_comp.mon_nstd_flag . _chem_comp.name 3-chloro-4-(2-hydroxy-4-propylphenoxy)benzonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 NJ8 doub 299 n y C1 C6 NJ8 sing 300 n y C1 H1 NJ8 sing 301 n n C21 C2 NJ8 sing 302 n n C3 C2 NJ8 sing 303 n y C3 C4 NJ8 doub 304 n y C3 H3 NJ8 sing 305 n n C4 C5 NJ8 sing 306 n y C4 H4 NJ8 sing 307 n n C5 C6 NJ8 doub 308 n y C5 O7 NJ8 sing 309 n n C6 O17 NJ8 sing 310 n n O7 C8 NJ8 sing 311 n n C8 C9 NJ8 doub 312 n y C8 C13 NJ8 sing 313 n y CL16 C9 NJ8 sing 314 n n C9 C10 NJ8 sing 315 n y C10 C11 NJ8 doub 316 n y C10 H10 NJ8 sing 317 n n C12 C11 NJ8 sing 318 n y C11 C15 NJ8 sing 319 n n C13 C12 NJ8 doub 320 n y C12 H12 NJ8 sing 321 n n C13 H13 NJ8 sing 322 n n C15 N20 NJ8 trip 323 n n O17 HO17 NJ8 sing 324 n n C22 C21 NJ8 sing 325 n n C21 H21 NJ8 sing 326 n n C21 H21A NJ8 sing 327 n n C22 C23 NJ8 sing 328 n n C22 H22 NJ8 sing 329 n n C22 H22A NJ8 sing 330 n n C23 H23 NJ8 sing 331 n n C23 H23A NJ8 sing 332 n n C23 H23B NJ8 sing 333 n n # _atom_sites.entry_id 3NJ8 _atom_sites.fract_transf_matrix[1][1] 0.012779 _atom_sites.fract_transf_matrix[1][2] 0.007378 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014755 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005289 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 316 1 NAD NAD . D 3 NJ8 A 1 501 501 NJ8 NJ8 . E 2 NAD B 1 316 1 NAD NAD . F 3 NJ8 B 1 501 501 NJ8 NJ8 . G 4 HOH A 1 317 1 HOH HOH . G 4 HOH A 2 318 2 HOH HOH . G 4 HOH A 3 319 5 HOH HOH . G 4 HOH A 4 320 6 HOH HOH . G 4 HOH A 5 321 7 HOH HOH . G 4 HOH A 6 322 8 HOH HOH . G 4 HOH A 7 323 12 HOH HOH . G 4 HOH A 8 324 16 HOH HOH . G 4 HOH A 9 325 21 HOH HOH . G 4 HOH A 10 326 23 HOH HOH . G 4 HOH A 11 327 25 HOH HOH . G 4 HOH A 12 328 27 HOH HOH . G 4 HOH A 13 329 28 HOH HOH . G 4 HOH A 14 330 29 HOH HOH . G 4 HOH A 15 331 32 HOH HOH . G 4 HOH A 16 332 34 HOH HOH . G 4 HOH A 17 333 36 HOH HOH . G 4 HOH A 18 334 37 HOH HOH . G 4 HOH A 19 335 38 HOH HOH . G 4 HOH A 20 336 39 HOH HOH . G 4 HOH A 21 337 44 HOH HOH . G 4 HOH A 22 338 46 HOH HOH . H 4 HOH B 1 317 3 HOH HOH . H 4 HOH B 2 318 4 HOH HOH . H 4 HOH B 3 319 9 HOH HOH . H 4 HOH B 4 320 10 HOH HOH . H 4 HOH B 5 321 11 HOH HOH . H 4 HOH B 6 322 13 HOH HOH . H 4 HOH B 7 323 14 HOH HOH . H 4 HOH B 8 324 15 HOH HOH . H 4 HOH B 9 325 17 HOH HOH . H 4 HOH B 10 326 18 HOH HOH . H 4 HOH B 11 327 19 HOH HOH . H 4 HOH B 12 328 20 HOH HOH . H 4 HOH B 13 329 22 HOH HOH . H 4 HOH B 14 330 24 HOH HOH . H 4 HOH B 15 331 26 HOH HOH . H 4 HOH B 16 332 30 HOH HOH . H 4 HOH B 17 333 31 HOH HOH . H 4 HOH B 18 334 33 HOH HOH . H 4 HOH B 19 335 35 HOH HOH . H 4 HOH B 20 336 40 HOH HOH . H 4 HOH B 21 337 41 HOH HOH . H 4 HOH B 22 338 42 HOH HOH . H 4 HOH B 23 339 43 HOH HOH . H 4 HOH B 24 340 45 HOH HOH . H 4 HOH B 25 341 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NJ8 . . . D 3 29.402 53.241 67.887 1 37.43 ? C1 NJ8 501 A 1 HETATM 2 C C2 NJ8 . . . D 3 28.81 54.369 67.328 1 37.34 ? C2 NJ8 501 A 1 HETATM 3 C C3 NJ8 . . . D 3 27.427 54.431 67.185 1 37.62 ? C3 NJ8 501 A 1 HETATM 4 C C4 NJ8 . . . D 3 26.639 53.364 67.602 1 37.89 ? C4 NJ8 501 A 1 HETATM 5 C C5 NJ8 . . . D 3 27.236 52.234 68.153 1 38.02 ? C5 NJ8 501 A 1 HETATM 6 C C6 NJ8 . . . D 3 28.613 52.174 68.301 1 37.85 ? C6 NJ8 501 A 1 HETATM 7 O O7 NJ8 . . . D 3 26.461 51.183 68.568 1 38.39 ? O7 NJ8 501 A 1 HETATM 8 C C8 NJ8 . . . D 3 26.208 51.08 69.906 1 38.82 ? C8 NJ8 501 A 1 HETATM 9 C C9 NJ8 . . . D 3 25.486 50.023 70.438 1 39.12 ? C9 NJ8 501 A 1 HETATM 10 C C10 NJ8 . . . D 3 25.253 49.958 71.805 1 39.39 ? C10 NJ8 501 A 1 HETATM 11 C C11 NJ8 . . . D 3 25.747 50.957 72.633 1 39.53 ? C11 NJ8 501 A 1 HETATM 12 C C12 NJ8 . . . D 3 26.469 52.015 72.102 1 39.16 ? C12 NJ8 501 A 1 HETATM 13 C C13 NJ8 . . . D 3 26.699 52.075 70.739 1 38.98 ? C13 NJ8 501 A 1 HETATM 14 C C15 NJ8 . . . D 3 25.557 50.936 73.903 1 40.02 ? C15 NJ8 501 A 1 HETATM 15 CL CL16 NJ8 . . . D 3 24.84 48.72 69.394 1 39.32 ? CL16 NJ8 501 A 1 HETATM 16 O O17 NJ8 . . . D 3 29.19 51.068 68.849 1 37.97 ? O17 NJ8 501 A 1 HETATM 17 N N20 NJ8 . . . D 3 25.396 50.883 75.054 1 40.4 ? N20 NJ8 501 A 1 HETATM 18 C C21 NJ8 . . . D 3 29.672 55.525 66.878 1 36.86 ? C21 NJ8 501 A 1 HETATM 19 C C22 NJ8 . . . D 3 28.845 56.803 66.8 1 36.19 ? C22 NJ8 501 A 1 HETATM 20 C C23 NJ8 . . . D 3 29.364 57.846 67.768 1 35.42 ? C23 NJ8 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #