data_3NKS
#
_model_server_result.job_id            uirehC34HBcjuq8Di03yCw 
_model_server_result.datetime_utc      '2024-11-08 20:56:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3nks 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":968}' 
#
_entry.id    3NKS 
#
_exptl.entry_id    3NKS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3NKS 
_cell.length_a            136.702 
_cell.length_b            136.702 
_cell.length_c            158.877 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3NKS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,B,C,D,E,F 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 18_445 -x-2/3,-x+y-1/3,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 -68.351 -39.462468 105.918 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 252 n n 
C1 C2 GOL sing 253 n n 
C1 H11 GOL sing 254 n n 
C1 H12 GOL sing 255 n n 
O1 HO1 GOL sing 256 n n 
C2 O2 GOL sing 257 n n 
C2 C3 GOL sing 258 n n 
C2 H2 GOL sing 259 n n 
O2 HO2 GOL sing 260 n n 
C3 O3 GOL sing 261 n n 
C3 H31 GOL sing 262 n n 
C3 H32 GOL sing 263 n n 
O3 HO3 GOL sing 264 n n 
#
_atom_sites.entry_id                     3NKS 
_atom_sites.fract_transf_matrix[1][1]    0.007315 
_atom_sites.fract_transf_matrix[1][2]    0.004223 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008447 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006294 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACJ A 1 478 465 ACJ ACJ . 
C 3 FAD A 1 479 466 FAD FAD . 
D 4 GOL A 1 968 968 GOL GOL . 
E 4 GOL A 1 969 969 GOL GOL . 
F 5 HOH A 1 480 1 HOH HOH . 
F 5 HOH A 2 481 2 HOH HOH . 
F 5 HOH A 3 482 3 HOH HOH . 
F 5 HOH A 4 483 4 HOH HOH . 
F 5 HOH A 5 484 5 HOH HOH . 
F 5 HOH A 6 485 6 HOH HOH . 
F 5 HOH A 7 486 7 HOH HOH . 
F 5 HOH A 8 487 8 HOH HOH . 
F 5 HOH A 9 488 9 HOH HOH . 
F 5 HOH A 10 489 10 HOH HOH . 
F 5 HOH A 11 490 11 HOH HOH . 
F 5 HOH A 12 491 12 HOH HOH . 
F 5 HOH A 13 492 13 HOH HOH . 
F 5 HOH A 14 493 14 HOH HOH . 
F 5 HOH A 15 494 15 HOH HOH . 
F 5 HOH A 16 495 16 HOH HOH . 
F 5 HOH A 17 496 17 HOH HOH . 
F 5 HOH A 18 497 18 HOH HOH . 
F 5 HOH A 19 498 19 HOH HOH . 
F 5 HOH A 20 499 20 HOH HOH . 
F 5 HOH A 21 500 21 HOH HOH . 
F 5 HOH A 22 501 22 HOH HOH . 
F 5 HOH A 23 502 23 HOH HOH . 
F 5 HOH A 24 503 24 HOH HOH . 
F 5 HOH A 25 504 25 HOH HOH . 
F 5 HOH A 26 505 26 HOH HOH . 
F 5 HOH A 27 506 27 HOH HOH . 
F 5 HOH A 28 507 28 HOH HOH . 
F 5 HOH A 29 508 29 HOH HOH . 
F 5 HOH A 30 509 30 HOH HOH . 
F 5 HOH A 31 510 31 HOH HOH . 
F 5 HOH A 32 511 32 HOH HOH . 
F 5 HOH A 33 512 33 HOH HOH . 
F 5 HOH A 34 513 34 HOH HOH . 
F 5 HOH A 35 514 35 HOH HOH . 
F 5 HOH A 36 515 36 HOH HOH . 
F 5 HOH A 37 516 37 HOH HOH . 
F 5 HOH A 38 517 38 HOH HOH . 
F 5 HOH A 39 518 39 HOH HOH . 
F 5 HOH A 40 519 40 HOH HOH . 
F 5 HOH A 41 520 41 HOH HOH . 
F 5 HOH A 42 521 42 HOH HOH . 
F 5 HOH A 43 522 44 HOH HOH . 
F 5 HOH A 44 523 45 HOH HOH . 
F 5 HOH A 45 524 46 HOH HOH . 
F 5 HOH A 46 525 47 HOH HOH . 
F 5 HOH A 47 526 48 HOH HOH . 
F 5 HOH A 48 527 49 HOH HOH . 
F 5 HOH A 49 528 50 HOH HOH . 
F 5 HOH A 50 529 51 HOH HOH . 
F 5 HOH A 51 530 52 HOH HOH . 
F 5 HOH A 52 531 53 HOH HOH . 
F 5 HOH A 53 532 54 HOH HOH . 
F 5 HOH A 54 533 55 HOH HOH . 
F 5 HOH A 55 534 56 HOH HOH . 
F 5 HOH A 56 535 57 HOH HOH . 
F 5 HOH A 57 536 58 HOH HOH . 
F 5 HOH A 58 537 59 HOH HOH . 
F 5 HOH A 59 538 60 HOH HOH . 
F 5 HOH A 60 539 61 HOH HOH . 
F 5 HOH A 61 540 62 HOH HOH . 
F 5 HOH A 62 541 63 HOH HOH . 
F 5 HOH A 63 542 64 HOH HOH . 
F 5 HOH A 64 543 65 HOH HOH . 
F 5 HOH A 65 544 66 HOH HOH . 
F 5 HOH A 66 545 67 HOH HOH . 
F 5 HOH A 67 546 68 HOH HOH . 
F 5 HOH A 68 547 69 HOH HOH . 
F 5 HOH A 69 548 70 HOH HOH . 
F 5 HOH A 70 549 71 HOH HOH . 
F 5 HOH A 71 550 72 HOH HOH . 
F 5 HOH A 72 551 73 HOH HOH . 
F 5 HOH A 73 552 74 HOH HOH . 
F 5 HOH A 74 553 75 HOH HOH . 
F 5 HOH A 75 554 76 HOH HOH . 
F 5 HOH A 76 555 77 HOH HOH . 
F 5 HOH A 77 556 78 HOH HOH . 
F 5 HOH A 78 557 79 HOH HOH . 
F 5 HOH A 79 558 80 HOH HOH . 
F 5 HOH A 80 559 81 HOH HOH . 
F 5 HOH A 81 560 82 HOH HOH . 
F 5 HOH A 82 561 83 HOH HOH . 
F 5 HOH A 83 562 84 HOH HOH . 
F 5 HOH A 84 563 85 HOH HOH . 
F 5 HOH A 85 564 86 HOH HOH . 
F 5 HOH A 86 565 87 HOH HOH . 
F 5 HOH A 87 566 88 HOH HOH . 
F 5 HOH A 88 567 89 HOH HOH . 
F 5 HOH A 89 568 90 HOH HOH . 
F 5 HOH A 90 569 91 HOH HOH . 
F 5 HOH A 91 570 92 HOH HOH . 
F 5 HOH A 92 571 93 HOH HOH . 
F 5 HOH A 93 572 94 HOH HOH . 
F 5 HOH A 94 573 95 HOH HOH . 
F 5 HOH A 95 574 96 HOH HOH . 
F 5 HOH A 96 575 97 HOH HOH . 
F 5 HOH A 97 576 98 HOH HOH . 
F 5 HOH A 98 577 99 HOH HOH . 
F 5 HOH A 99 578 100 HOH HOH . 
F 5 HOH A 100 579 101 HOH HOH . 
F 5 HOH A 101 580 102 HOH HOH . 
F 5 HOH A 102 581 103 HOH HOH . 
F 5 HOH A 103 582 104 HOH HOH . 
F 5 HOH A 104 583 105 HOH HOH . 
F 5 HOH A 105 584 106 HOH HOH . 
F 5 HOH A 106 585 107 HOH HOH . 
F 5 HOH A 107 586 108 HOH HOH . 
F 5 HOH A 108 587 109 HOH HOH . 
F 5 HOH A 109 588 110 HOH HOH . 
F 5 HOH A 110 589 111 HOH HOH . 
F 5 HOH A 111 590 112 HOH HOH . 
F 5 HOH A 112 591 113 HOH HOH . 
F 5 HOH A 113 592 114 HOH HOH . 
F 5 HOH A 114 593 115 HOH HOH . 
F 5 HOH A 115 594 116 HOH HOH . 
F 5 HOH A 116 595 117 HOH HOH . 
F 5 HOH A 117 596 118 HOH HOH . 
F 5 HOH A 118 597 119 HOH HOH . 
F 5 HOH A 119 598 120 HOH HOH . 
F 5 HOH A 120 599 121 HOH HOH . 
F 5 HOH A 121 600 122 HOH HOH . 
F 5 HOH A 122 601 123 HOH HOH . 
F 5 HOH A 123 602 124 HOH HOH . 
F 5 HOH A 124 603 125 HOH HOH . 
F 5 HOH A 125 604 126 HOH HOH . 
F 5 HOH A 126 605 127 HOH HOH . 
F 5 HOH A 127 606 128 HOH HOH . 
F 5 HOH A 128 607 129 HOH HOH . 
F 5 HOH A 129 608 130 HOH HOH . 
F 5 HOH A 130 609 131 HOH HOH . 
F 5 HOH A 131 610 132 HOH HOH . 
F 5 HOH A 132 611 133 HOH HOH . 
F 5 HOH A 133 612 135 HOH HOH . 
F 5 HOH A 134 613 136 HOH HOH . 
F 5 HOH A 135 614 137 HOH HOH . 
F 5 HOH A 136 615 138 HOH HOH . 
F 5 HOH A 137 616 139 HOH HOH . 
F 5 HOH A 138 617 140 HOH HOH . 
F 5 HOH A 139 618 141 HOH HOH . 
F 5 HOH A 140 619 142 HOH HOH . 
F 5 HOH A 141 620 143 HOH HOH . 
F 5 HOH A 142 621 144 HOH HOH . 
F 5 HOH A 143 622 145 HOH HOH . 
F 5 HOH A 144 623 146 HOH HOH . 
F 5 HOH A 145 624 147 HOH HOH . 
F 5 HOH A 146 625 148 HOH HOH . 
F 5 HOH A 147 626 149 HOH HOH . 
F 5 HOH A 148 627 150 HOH HOH . 
F 5 HOH A 149 628 151 HOH HOH . 
F 5 HOH A 150 629 152 HOH HOH . 
F 5 HOH A 151 630 153 HOH HOH . 
F 5 HOH A 152 631 154 HOH HOH . 
F 5 HOH A 153 632 155 HOH HOH . 
F 5 HOH A 154 633 156 HOH HOH . 
F 5 HOH A 155 634 157 HOH HOH . 
F 5 HOH A 156 635 158 HOH HOH . 
F 5 HOH A 157 636 159 HOH HOH . 
F 5 HOH A 158 637 160 HOH HOH . 
F 5 HOH A 159 638 161 HOH HOH . 
F 5 HOH A 160 639 162 HOH HOH . 
F 5 HOH A 161 640 163 HOH HOH . 
F 5 HOH A 162 641 164 HOH HOH . 
F 5 HOH A 163 642 165 HOH HOH . 
F 5 HOH A 164 643 166 HOH HOH . 
F 5 HOH A 165 644 167 HOH HOH . 
F 5 HOH A 166 645 168 HOH HOH . 
F 5 HOH A 167 646 169 HOH HOH . 
F 5 HOH A 168 647 170 HOH HOH . 
F 5 HOH A 169 648 171 HOH HOH . 
F 5 HOH A 170 649 172 HOH HOH . 
F 5 HOH A 171 650 173 HOH HOH . 
F 5 HOH A 172 651 174 HOH HOH . 
F 5 HOH A 173 652 175 HOH HOH . 
F 5 HOH A 174 653 176 HOH HOH . 
F 5 HOH A 175 654 177 HOH HOH . 
F 5 HOH A 176 655 178 HOH HOH . 
F 5 HOH A 177 656 179 HOH HOH . 
F 5 HOH A 178 657 180 HOH HOH . 
F 5 HOH A 179 658 181 HOH HOH . 
F 5 HOH A 180 659 182 HOH HOH . 
F 5 HOH A 181 660 183 HOH HOH . 
F 5 HOH A 182 661 184 HOH HOH . 
F 5 HOH A 183 662 185 HOH HOH . 
F 5 HOH A 184 663 186 HOH HOH . 
F 5 HOH A 185 664 187 HOH HOH . 
F 5 HOH A 186 665 188 HOH HOH . 
F 5 HOH A 187 666 189 HOH HOH . 
F 5 HOH A 188 667 190 HOH HOH . 
F 5 HOH A 189 668 191 HOH HOH . 
F 5 HOH A 190 669 192 HOH HOH . 
F 5 HOH A 191 670 193 HOH HOH . 
F 5 HOH A 192 671 194 HOH HOH . 
F 5 HOH A 193 672 195 HOH HOH . 
F 5 HOH A 194 673 196 HOH HOH . 
F 5 HOH A 195 674 197 HOH HOH . 
F 5 HOH A 196 675 198 HOH HOH . 
F 5 HOH A 197 676 199 HOH HOH . 
F 5 HOH A 198 677 200 HOH HOH . 
F 5 HOH A 199 678 201 HOH HOH . 
F 5 HOH A 200 679 202 HOH HOH . 
F 5 HOH A 201 680 203 HOH HOH . 
F 5 HOH A 202 681 204 HOH HOH . 
F 5 HOH A 203 682 205 HOH HOH . 
F 5 HOH A 204 683 206 HOH HOH . 
F 5 HOH A 205 684 207 HOH HOH . 
F 5 HOH A 206 685 208 HOH HOH . 
F 5 HOH A 207 686 209 HOH HOH . 
F 5 HOH A 208 687 210 HOH HOH . 
F 5 HOH A 209 688 211 HOH HOH . 
F 5 HOH A 210 689 212 HOH HOH . 
F 5 HOH A 211 690 213 HOH HOH . 
F 5 HOH A 212 691 214 HOH HOH . 
F 5 HOH A 213 692 215 HOH HOH . 
F 5 HOH A 214 693 216 HOH HOH . 
F 5 HOH A 215 694 217 HOH HOH . 
F 5 HOH A 216 695 218 HOH HOH . 
F 5 HOH A 217 696 219 HOH HOH . 
F 5 HOH A 218 697 220 HOH HOH . 
F 5 HOH A 219 698 221 HOH HOH . 
F 5 HOH A 220 699 222 HOH HOH . 
F 5 HOH A 221 700 223 HOH HOH . 
F 5 HOH A 222 701 224 HOH HOH . 
F 5 HOH A 223 702 225 HOH HOH . 
F 5 HOH A 224 703 226 HOH HOH . 
F 5 HOH A 225 704 227 HOH HOH . 
F 5 HOH A 226 705 228 HOH HOH . 
F 5 HOH A 227 706 229 HOH HOH . 
F 5 HOH A 228 707 230 HOH HOH . 
F 5 HOH A 229 708 231 HOH HOH . 
F 5 HOH A 230 709 232 HOH HOH . 
F 5 HOH A 231 710 233 HOH HOH . 
F 5 HOH A 232 711 234 HOH HOH . 
F 5 HOH A 233 712 235 HOH HOH . 
F 5 HOH A 234 713 236 HOH HOH . 
F 5 HOH A 235 714 237 HOH HOH . 
F 5 HOH A 236 715 238 HOH HOH . 
F 5 HOH A 237 716 239 HOH HOH . 
F 5 HOH A 238 717 240 HOH HOH . 
F 5 HOH A 239 718 241 HOH HOH . 
F 5 HOH A 240 719 242 HOH HOH . 
F 5 HOH A 241 720 243 HOH HOH . 
F 5 HOH A 242 721 244 HOH HOH . 
F 5 HOH A 243 722 245 HOH HOH . 
F 5 HOH A 244 723 246 HOH HOH . 
F 5 HOH A 245 724 247 HOH HOH . 
F 5 HOH A 246 725 248 HOH HOH . 
F 5 HOH A 247 726 249 HOH HOH . 
F 5 HOH A 248 727 250 HOH HOH . 
F 5 HOH A 249 728 251 HOH HOH . 
F 5 HOH A 250 729 252 HOH HOH . 
F 5 HOH A 251 730 253 HOH HOH . 
F 5 HOH A 252 731 254 HOH HOH . 
F 5 HOH A 253 732 255 HOH HOH . 
F 5 HOH A 254 733 256 HOH HOH . 
F 5 HOH A 255 734 257 HOH HOH . 
F 5 HOH A 256 735 258 HOH HOH . 
F 5 HOH A 257 736 259 HOH HOH . 
F 5 HOH A 258 737 260 HOH HOH . 
F 5 HOH A 259 738 261 HOH HOH . 
F 5 HOH A 260 739 262 HOH HOH . 
F 5 HOH A 261 740 263 HOH HOH . 
F 5 HOH A 262 741 264 HOH HOH . 
F 5 HOH A 263 742 265 HOH HOH . 
F 5 HOH A 264 743 266 HOH HOH . 
F 5 HOH A 265 744 267 HOH HOH . 
F 5 HOH A 266 745 268 HOH HOH . 
F 5 HOH A 267 746 269 HOH HOH . 
F 5 HOH A 268 747 270 HOH HOH . 
F 5 HOH A 269 748 272 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 -24.463 -22.715 38.778 1 70.53 ? C1 GOL 968 A 1 
HETATM 2 O O1 GOL . . . D 4 -23.935 -22.352 40.056 1 69.65 ? O1 GOL 968 A 1 
HETATM 3 C C2 GOL . . . D 4 -23.322 -23.155 37.859 1 70.2 ? C2 GOL 968 A 1 
HETATM 4 O O2 GOL . . . D 4 -22.647 -24.274 38.438 1 70.42 ? O2 GOL 968 A 1 
HETATM 5 C C3 GOL . . . D 4 -23.875 -23.542 36.487 1 70.4 ? C3 GOL 968 A 1 
HETATM 6 O O3 GOL . . . D 4 -22.801 -23.949 35.631 1 70.1 ? O3 GOL 968 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#