data_3NMA
#
_model_server_result.job_id            PYjK2aB1gK6XaFQVZuLzBA 
_model_server_result.datetime_utc      '2024-12-26 11:57:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3nma 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1055}' 
#
_entry.id    3NMA 
#
_exptl.entry_id    3NMA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3NMA 
_cell.length_a            93.834 
_cell.length_b            93.834 
_cell.length_c            121.687 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3NMA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 238 A ASP 238 1_555 D MG MG . A MG 1055 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? 
metalc ? metalc2 A OD1 ASP 339 A ASP 339 1_555 D MG MG . A MG 1055 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.993 ? 
hydrog 'G-C PAIR' hydrog1 B N1 G 1 B G 906 1_555 C N3 C 2 C C 919 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3NMA 
_atom_sites.fract_transf_matrix[1][1]    0.010657 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010657 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008218 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 MG A 1 1055 1055 MG MG . 
E 5 HOH A 1 502 502 HOH HOH . 
E 5 HOH A 2 503 503 HOH HOH . 
E 5 HOH A 3 504 504 HOH HOH . 
E 5 HOH A 4 505 505 HOH HOH . 
E 5 HOH A 5 506 506 HOH HOH . 
E 5 HOH A 6 507 507 HOH HOH . 
E 5 HOH A 7 508 508 HOH HOH . 
E 5 HOH A 8 509 509 HOH HOH . 
E 5 HOH A 9 510 510 HOH HOH . 
E 5 HOH A 10 511 511 HOH HOH . 
E 5 HOH A 11 512 512 HOH HOH . 
E 5 HOH A 12 513 513 HOH HOH . 
E 5 HOH A 13 514 514 HOH HOH . 
E 5 HOH A 14 516 516 HOH HOH . 
E 5 HOH A 15 517 517 HOH HOH . 
E 5 HOH A 16 518 518 HOH HOH . 
E 5 HOH A 17 519 519 HOH HOH . 
E 5 HOH A 18 520 520 HOH HOH . 
E 5 HOH A 19 521 521 HOH HOH . 
E 5 HOH A 20 523 523 HOH HOH . 
E 5 HOH A 21 524 524 HOH HOH . 
E 5 HOH A 22 525 525 HOH HOH . 
E 5 HOH A 23 526 526 HOH HOH . 
E 5 HOH A 24 527 527 HOH HOH . 
E 5 HOH A 25 528 528 HOH HOH . 
E 5 HOH A 26 529 529 HOH HOH . 
E 5 HOH A 27 530 530 HOH HOH . 
E 5 HOH A 28 531 531 HOH HOH . 
E 5 HOH A 29 532 532 HOH HOH . 
E 5 HOH A 30 533 533 HOH HOH . 
E 5 HOH A 31 534 534 HOH HOH . 
E 5 HOH A 32 535 535 HOH HOH . 
E 5 HOH A 33 536 536 HOH HOH . 
E 5 HOH A 34 537 537 HOH HOH . 
E 5 HOH A 35 538 538 HOH HOH . 
E 5 HOH A 36 539 539 HOH HOH . 
E 5 HOH A 37 540 540 HOH HOH . 
E 5 HOH A 38 541 541 HOH HOH . 
E 5 HOH A 39 542 542 HOH HOH . 
E 5 HOH A 40 543 543 HOH HOH . 
E 5 HOH A 41 544 544 HOH HOH . 
E 5 HOH A 42 545 545 HOH HOH . 
E 5 HOH A 43 546 546 HOH HOH . 
E 5 HOH A 44 547 547 HOH HOH . 
F 5 HOH B 1 522 522 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               18.84 
_atom_site.Cartn_y               13.548 
_atom_site.Cartn_z               32.533 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        54.45 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           1055 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           1 
#