data_3NML # _model_server_result.job_id dPxBrJdPeiMRj6u5lubC8g _model_server_result.datetime_utc '2024-10-10 17:17:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nml # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":157}' # _entry.id 3NML # _exptl.entry_id 3NML _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3NML _cell.length_a 38.93 _cell.length_b 46.96 _cell.length_c 89.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NML _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 93 1_555 B FE HEM . A HEM 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc2 B FE HEM . A HEM 154 1_555 C C CMO . A CMO 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.538 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 360 n n S O2 SO4 doub 361 n n S O3 SO4 sing 362 n n S O4 SO4 sing 363 n n # _atom_sites.entry_id 3NML _atom_sites.fract_transf_matrix[1][1] 0.025687 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021295 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011173 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 154 154 HEM HEM . C 3 CMO A 1 155 155 CMO CMO . D 4 SO4 A 1 156 1 SO4 SO4 . E 4 SO4 A 1 157 2 SO4 SO4 . F 4 SO4 A 1 158 3 SO4 SO4 . G 5 HOH A 1 159 159 HOH HOH . G 5 HOH A 2 160 160 HOH HOH . G 5 HOH A 3 161 161 HOH HOH . G 5 HOH A 4 162 162 HOH HOH . G 5 HOH A 5 163 163 HOH HOH . G 5 HOH A 6 164 164 HOH HOH . G 5 HOH A 7 165 165 HOH HOH . G 5 HOH A 8 166 166 HOH HOH . G 5 HOH A 9 167 167 HOH HOH . G 5 HOH A 10 168 168 HOH HOH . G 5 HOH A 11 169 169 HOH HOH . G 5 HOH A 12 170 170 HOH HOH . G 5 HOH A 13 171 171 HOH HOH . G 5 HOH A 14 172 172 HOH HOH . G 5 HOH A 15 173 173 HOH HOH . G 5 HOH A 16 174 174 HOH HOH . G 5 HOH A 17 175 175 HOH HOH . G 5 HOH A 18 176 176 HOH HOH . G 5 HOH A 19 177 177 HOH HOH . G 5 HOH A 20 178 178 HOH HOH . G 5 HOH A 21 179 179 HOH HOH . G 5 HOH A 22 180 180 HOH HOH . G 5 HOH A 23 181 181 HOH HOH . G 5 HOH A 24 182 182 HOH HOH . G 5 HOH A 25 183 183 HOH HOH . G 5 HOH A 26 184 184 HOH HOH . G 5 HOH A 27 185 185 HOH HOH . G 5 HOH A 28 186 186 HOH HOH . G 5 HOH A 29 187 187 HOH HOH . G 5 HOH A 30 188 188 HOH HOH . G 5 HOH A 31 189 189 HOH HOH . G 5 HOH A 32 190 190 HOH HOH . G 5 HOH A 33 191 191 HOH HOH . G 5 HOH A 34 192 192 HOH HOH . G 5 HOH A 35 193 193 HOH HOH . G 5 HOH A 36 194 194 HOH HOH . G 5 HOH A 37 195 195 HOH HOH . G 5 HOH A 38 196 196 HOH HOH . G 5 HOH A 39 197 197 HOH HOH . G 5 HOH A 40 198 198 HOH HOH . G 5 HOH A 41 199 199 HOH HOH . G 5 HOH A 42 200 200 HOH HOH . G 5 HOH A 43 201 201 HOH HOH . G 5 HOH A 44 202 202 HOH HOH . G 5 HOH A 45 203 203 HOH HOH . G 5 HOH A 46 204 204 HOH HOH . G 5 HOH A 47 205 205 HOH HOH . G 5 HOH A 48 206 206 HOH HOH . G 5 HOH A 49 207 207 HOH HOH . G 5 HOH A 50 208 208 HOH HOH . G 5 HOH A 51 209 209 HOH HOH . G 5 HOH A 52 210 210 HOH HOH . G 5 HOH A 53 211 211 HOH HOH . G 5 HOH A 54 212 212 HOH HOH . G 5 HOH A 55 213 213 HOH HOH . G 5 HOH A 56 214 214 HOH HOH . G 5 HOH A 57 215 215 HOH HOH . G 5 HOH A 58 216 216 HOH HOH . G 5 HOH A 59 217 217 HOH HOH . G 5 HOH A 60 218 218 HOH HOH . G 5 HOH A 61 219 219 HOH HOH . G 5 HOH A 62 220 220 HOH HOH . G 5 HOH A 63 221 221 HOH HOH . G 5 HOH A 64 222 222 HOH HOH . G 5 HOH A 65 223 223 HOH HOH . G 5 HOH A 66 224 224 HOH HOH . G 5 HOH A 67 225 225 HOH HOH . G 5 HOH A 68 226 226 HOH HOH . G 5 HOH A 69 227 227 HOH HOH . G 5 HOH A 70 228 228 HOH HOH . G 5 HOH A 71 229 229 HOH HOH . G 5 HOH A 72 230 230 HOH HOH . G 5 HOH A 73 231 231 HOH HOH . G 5 HOH A 74 232 232 HOH HOH . G 5 HOH A 75 233 233 HOH HOH . G 5 HOH A 76 234 1 HOH HOH . G 5 HOH A 77 235 2 HOH HOH . G 5 HOH A 78 236 3 HOH HOH . G 5 HOH A 79 237 4 HOH HOH . G 5 HOH A 80 238 5 HOH HOH . G 5 HOH A 81 239 6 HOH HOH . G 5 HOH A 82 240 7 HOH HOH . G 5 HOH A 83 241 8 HOH HOH . G 5 HOH A 84 242 9 HOH HOH . G 5 HOH A 85 243 10 HOH HOH . G 5 HOH A 86 244 11 HOH HOH . G 5 HOH A 87 245 12 HOH HOH . G 5 HOH A 88 246 13 HOH HOH . G 5 HOH A 89 247 14 HOH HOH . G 5 HOH A 90 248 15 HOH HOH . G 5 HOH A 91 249 16 HOH HOH . G 5 HOH A 92 250 17 HOH HOH . G 5 HOH A 93 251 18 HOH HOH . G 5 HOH A 94 252 19 HOH HOH . G 5 HOH A 95 253 20 HOH HOH . G 5 HOH A 96 254 21 HOH HOH . G 5 HOH A 97 255 22 HOH HOH . G 5 HOH A 98 256 23 HOH HOH . G 5 HOH A 99 257 24 HOH HOH . G 5 HOH A 100 258 25 HOH HOH . G 5 HOH A 101 259 26 HOH HOH . G 5 HOH A 102 260 27 HOH HOH . G 5 HOH A 103 261 28 HOH HOH . G 5 HOH A 104 262 29 HOH HOH . G 5 HOH A 105 263 30 HOH HOH . G 5 HOH A 106 264 31 HOH HOH . G 5 HOH A 107 265 32 HOH HOH . G 5 HOH A 108 266 33 HOH HOH . G 5 HOH A 109 267 34 HOH HOH . G 5 HOH A 110 268 35 HOH HOH . G 5 HOH A 111 269 36 HOH HOH . G 5 HOH A 112 270 37 HOH HOH . G 5 HOH A 113 271 38 HOH HOH . G 5 HOH A 114 272 39 HOH HOH . G 5 HOH A 115 273 40 HOH HOH . G 5 HOH A 116 274 41 HOH HOH . G 5 HOH A 117 275 42 HOH HOH . G 5 HOH A 118 276 43 HOH HOH . G 5 HOH A 119 277 44 HOH HOH . G 5 HOH A 120 278 45 HOH HOH . G 5 HOH A 121 279 46 HOH HOH . G 5 HOH A 122 280 47 HOH HOH . G 5 HOH A 123 281 48 HOH HOH . G 5 HOH A 124 282 49 HOH HOH . G 5 HOH A 125 283 50 HOH HOH . G 5 HOH A 126 284 51 HOH HOH . G 5 HOH A 127 285 52 HOH HOH . G 5 HOH A 128 286 53 HOH HOH . G 5 HOH A 129 287 54 HOH HOH . G 5 HOH A 130 288 55 HOH HOH . G 5 HOH A 131 289 56 HOH HOH . G 5 HOH A 132 290 57 HOH HOH . G 5 HOH A 133 291 58 HOH HOH . G 5 HOH A 134 292 59 HOH HOH . G 5 HOH A 135 293 60 HOH HOH . G 5 HOH A 136 294 61 HOH HOH . G 5 HOH A 137 295 62 HOH HOH . G 5 HOH A 138 296 63 HOH HOH . G 5 HOH A 139 297 64 HOH HOH . G 5 HOH A 140 298 65 HOH HOH . G 5 HOH A 141 299 66 HOH HOH . G 5 HOH A 142 300 67 HOH HOH . G 5 HOH A 143 301 68 HOH HOH . G 5 HOH A 144 302 69 HOH HOH . G 5 HOH A 145 303 70 HOH HOH . G 5 HOH A 146 304 71 HOH HOH . G 5 HOH A 147 305 72 HOH HOH . G 5 HOH A 148 306 73 HOH HOH . G 5 HOH A 149 307 74 HOH HOH . G 5 HOH A 150 308 75 HOH HOH . G 5 HOH A 151 309 76 HOH HOH . G 5 HOH A 152 310 77 HOH HOH . G 5 HOH A 153 311 78 HOH HOH . G 5 HOH A 154 312 79 HOH HOH . G 5 HOH A 155 313 80 HOH HOH . G 5 HOH A 156 314 81 HOH HOH . G 5 HOH A 157 315 82 HOH HOH . G 5 HOH A 158 316 83 HOH HOH . G 5 HOH A 159 317 84 HOH HOH . G 5 HOH A 160 318 85 HOH HOH . G 5 HOH A 161 319 86 HOH HOH . G 5 HOH A 162 320 87 HOH HOH . G 5 HOH A 163 321 88 HOH HOH . G 5 HOH A 164 322 89 HOH HOH . G 5 HOH A 165 323 90 HOH HOH . G 5 HOH A 166 324 91 HOH HOH . G 5 HOH A 167 325 92 HOH HOH . G 5 HOH A 168 326 93 HOH HOH . G 5 HOH A 169 327 94 HOH HOH . G 5 HOH A 170 328 95 HOH HOH . G 5 HOH A 171 329 96 HOH HOH . G 5 HOH A 172 330 97 HOH HOH . G 5 HOH A 173 331 98 HOH HOH . G 5 HOH A 174 332 99 HOH HOH . G 5 HOH A 175 333 100 HOH HOH . G 5 HOH A 176 334 101 HOH HOH . G 5 HOH A 177 335 102 HOH HOH . G 5 HOH A 178 336 103 HOH HOH . G 5 HOH A 179 337 104 HOH HOH . G 5 HOH A 180 338 105 HOH HOH . G 5 HOH A 181 339 106 HOH HOH . G 5 HOH A 182 340 107 HOH HOH . G 5 HOH A 183 341 108 HOH HOH . G 5 HOH A 184 342 109 HOH HOH . G 5 HOH A 185 343 110 HOH HOH . G 5 HOH A 186 344 111 HOH HOH . G 5 HOH A 187 345 112 HOH HOH . G 5 HOH A 188 346 113 HOH HOH . G 5 HOH A 189 347 114 HOH HOH . G 5 HOH A 190 348 115 HOH HOH . G 5 HOH A 191 349 116 HOH HOH . G 5 HOH A 192 350 117 HOH HOH . G 5 HOH A 193 351 118 HOH HOH . G 5 HOH A 194 352 119 HOH HOH . G 5 HOH A 195 353 120 HOH HOH . G 5 HOH A 196 354 121 HOH HOH . G 5 HOH A 197 355 122 HOH HOH . G 5 HOH A 198 356 123 HOH HOH . G 5 HOH A 199 357 124 HOH HOH . G 5 HOH A 200 358 125 HOH HOH . G 5 HOH A 201 359 126 HOH HOH . G 5 HOH A 202 360 127 HOH HOH . G 5 HOH A 203 361 128 HOH HOH . G 5 HOH A 204 362 129 HOH HOH . G 5 HOH A 205 363 130 HOH HOH . G 5 HOH A 206 364 131 HOH HOH . G 5 HOH A 207 365 132 HOH HOH . G 5 HOH A 208 366 133 HOH HOH . G 5 HOH A 209 367 134 HOH HOH . G 5 HOH A 210 368 135 HOH HOH . G 5 HOH A 211 369 136 HOH HOH . G 5 HOH A 212 370 137 HOH HOH . G 5 HOH A 213 371 138 HOH HOH . G 5 HOH A 214 372 139 HOH HOH . G 5 HOH A 215 373 140 HOH HOH . G 5 HOH A 216 374 141 HOH HOH . G 5 HOH A 217 375 142 HOH HOH . G 5 HOH A 218 376 143 HOH HOH . G 5 HOH A 219 377 144 HOH HOH . G 5 HOH A 220 378 145 HOH HOH . G 5 HOH A 221 379 146 HOH HOH . G 5 HOH A 222 380 147 HOH HOH . G 5 HOH A 223 381 148 HOH HOH . G 5 HOH A 224 382 149 HOH HOH . G 5 HOH A 225 383 150 HOH HOH . G 5 HOH A 226 384 151 HOH HOH . G 5 HOH A 227 385 152 HOH HOH . G 5 HOH A 228 386 153 HOH HOH . G 5 HOH A 229 387 154 HOH HOH . G 5 HOH A 230 388 155 HOH HOH . G 5 HOH A 231 389 156 HOH HOH . G 5 HOH A 232 390 157 HOH HOH . G 5 HOH A 233 391 158 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 4 20.457 12.96 80.407 1 70.44 ? S SO4 157 A 1 HETATM 2 O O1 SO4 . . . E 4 20.346 13.687 79.148 1 66.71 ? O1 SO4 157 A 1 HETATM 3 O O2 SO4 . . . E 4 19.125 12.576 80.858 1 74.49 ? O2 SO4 157 A 1 HETATM 4 O O3 SO4 . . . E 4 21.275 11.764 80.209 1 64.52 ? O3 SO4 157 A 1 HETATM 5 O O4 SO4 . . . E 4 21.072 13.826 81.406 1 75.38 ? O4 SO4 157 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #