data_3NN7 # _model_server_result.job_id ltkad33Z16v1ObPbn2timw _model_server_result.datetime_utc '2024-11-05 21:22:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nn7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":601}' # _entry.id 3NN7 # _exptl.entry_id 3NN7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 138.948 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'bromoacetic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3NN7 _cell.length_a 92.947 _cell.length_b 92.947 _cell.length_c 129.951 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NN7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 57 A ASP 57 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc2 A OD2 ASP 57 A ASP 57 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc3 A OD1 ASP 59 A ASP 59 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc4 A O GLN 61 A GLN 61 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc5 A OD2 ASP 138 A ASP 138 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc6 A NE2 HIS 142 A HIS 142 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc7 A NE2 HIS 146 A HIS 146 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.869 ? metalc ? metalc8 A OE2 GLU 166 A GLU 166 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? metalc ? metalc9 A OE1 GLU 177 A GLU 177 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? metalc ? metalc10 A OE2 GLU 177 A GLU 177 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.865 ? metalc ? metalc11 A OE2 GLU 177 A GLU 177 1_555 F CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc12 A O ASN 183 A ASN 183 1_555 F CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc13 A OD1 ASP 185 A ASP 185 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc14 A OD2 ASP 185 A ASP 185 1_555 F CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc15 A O GLU 187 A GLU 187 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc16 A OE2 GLU 190 A GLU 190 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc17 A OE1 GLU 190 A GLU 190 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc18 A OE2 GLU 190 A GLU 190 1_555 F CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc19 A O TYR 193 A TYR 193 1_555 E CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc20 A OG1 THR 194 A THR 194 1_555 E CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc21 A O THR 194 A THR 194 1_555 E CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc22 A O ILE 197 A ILE 197 1_555 E CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc23 A OD1 ASP 200 A ASP 200 1_555 E CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc24 B ZN ZN . A ZN 401 1_555 H O HOH . A HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc25 B ZN ZN . A ZN 401 1_555 H O HOH . A HOH 1018 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc26 C CA CA . A CA 501 1_555 H O HOH . A HOH 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc27 D CA CA . A CA 502 1_555 H O HOH . A HOH 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc28 D CA CA . A CA 502 1_555 H O HOH . A HOH 1044 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc29 D CA CA . A CA 502 1_555 H O HOH . A HOH 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc30 E CA CA . A CA 503 1_555 H O HOH . A HOH 1068 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? # _chem_comp.formula 'C2 H3 Br O2' _chem_comp.formula_weight 138.948 _chem_comp.id BXA _chem_comp.mon_nstd_flag . _chem_comp.name 'bromoacetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 BXA doub 70 n n O2 C1 BXA sing 71 n n C1 C2 BXA sing 72 n n C2 BR2 BXA sing 73 n n C2 H2 BXA sing 74 n n C2 H2A BXA sing 75 n n O2 HO2 BXA sing 76 n n # _atom_sites.entry_id 3NN7 _atom_sites.fract_transf_matrix[1][1] 0.010759 _atom_sites.fract_transf_matrix[1][2] 0.006212 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012423 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007695 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 401 ZN ZN . C 3 CA A 1 501 501 CA CA . D 3 CA A 1 502 502 CA CA . E 3 CA A 1 503 503 CA CA . F 3 CA A 1 504 504 CA CA . G 4 BXA A 1 601 601 BXA BXA . H 5 HOH A 1 1001 1001 HOH HOH . H 5 HOH A 2 1002 1002 HOH HOH . H 5 HOH A 3 1003 1003 HOH HOH . H 5 HOH A 4 1004 1004 HOH HOH . H 5 HOH A 5 1005 1005 HOH HOH . H 5 HOH A 6 1006 1006 HOH HOH . H 5 HOH A 7 1007 1007 HOH HOH . H 5 HOH A 8 1008 1008 HOH HOH . H 5 HOH A 9 1009 1009 HOH HOH . H 5 HOH A 10 1010 1010 HOH HOH . H 5 HOH A 11 1011 1011 HOH HOH . H 5 HOH A 12 1012 1012 HOH HOH . H 5 HOH A 13 1013 1013 HOH HOH . H 5 HOH A 14 1014 1014 HOH HOH . H 5 HOH A 15 1015 1015 HOH HOH . H 5 HOH A 16 1016 1016 HOH HOH . H 5 HOH A 17 1017 1017 HOH HOH . H 5 HOH A 18 1018 1018 HOH HOH . H 5 HOH A 19 1019 1019 HOH HOH . H 5 HOH A 20 1020 1020 HOH HOH . H 5 HOH A 21 1021 1021 HOH HOH . H 5 HOH A 22 1022 1022 HOH HOH . H 5 HOH A 23 1023 1023 HOH HOH . H 5 HOH A 24 1024 1024 HOH HOH . H 5 HOH A 25 1025 1025 HOH HOH . H 5 HOH A 26 1026 1026 HOH HOH . H 5 HOH A 27 1027 1027 HOH HOH . H 5 HOH A 28 1028 1028 HOH HOH . H 5 HOH A 29 1029 1029 HOH HOH . H 5 HOH A 30 1030 1030 HOH HOH . H 5 HOH A 31 1031 1031 HOH HOH . H 5 HOH A 32 1032 1032 HOH HOH . H 5 HOH A 33 1033 1033 HOH HOH . H 5 HOH A 34 1034 1034 HOH HOH . H 5 HOH A 35 1035 1035 HOH HOH . H 5 HOH A 36 1036 1036 HOH HOH . H 5 HOH A 37 1037 1037 HOH HOH . H 5 HOH A 38 1038 1038 HOH HOH . H 5 HOH A 39 1039 1039 HOH HOH . H 5 HOH A 40 1040 1040 HOH HOH . H 5 HOH A 41 1041 1041 HOH HOH . H 5 HOH A 42 1042 1042 HOH HOH . H 5 HOH A 43 1043 1043 HOH HOH . H 5 HOH A 44 1044 1044 HOH HOH . H 5 HOH A 45 1045 1045 HOH HOH . H 5 HOH A 46 1046 1046 HOH HOH . H 5 HOH A 47 1047 1047 HOH HOH . H 5 HOH A 48 1048 1048 HOH HOH . H 5 HOH A 49 1049 1049 HOH HOH . H 5 HOH A 50 1050 1050 HOH HOH . H 5 HOH A 51 1051 1051 HOH HOH . H 5 HOH A 52 1052 1052 HOH HOH . H 5 HOH A 53 1053 1053 HOH HOH . H 5 HOH A 54 1054 1054 HOH HOH . H 5 HOH A 55 1055 1055 HOH HOH . H 5 HOH A 56 1056 1056 HOH HOH . H 5 HOH A 57 1057 1057 HOH HOH . H 5 HOH A 58 1058 1058 HOH HOH . H 5 HOH A 59 1059 1059 HOH HOH . H 5 HOH A 60 1060 1060 HOH HOH . H 5 HOH A 61 1061 1061 HOH HOH . H 5 HOH A 62 1062 1062 HOH HOH . H 5 HOH A 63 1063 1063 HOH HOH . H 5 HOH A 64 1064 1064 HOH HOH . H 5 HOH A 65 1065 1065 HOH HOH . H 5 HOH A 66 1066 1066 HOH HOH . H 5 HOH A 67 1067 1067 HOH HOH . H 5 HOH A 68 1068 1068 HOH HOH . H 5 HOH A 69 1069 1069 HOH HOH . H 5 HOH A 70 1070 1070 HOH HOH . H 5 HOH A 71 1071 1071 HOH HOH . H 5 HOH A 72 1072 1072 HOH HOH . H 5 HOH A 73 1073 1073 HOH HOH . H 5 HOH A 74 1074 1074 HOH HOH . H 5 HOH A 75 1075 1075 HOH HOH . H 5 HOH A 76 1076 1076 HOH HOH . H 5 HOH A 77 1077 1077 HOH HOH . H 5 HOH A 78 1078 1078 HOH HOH . H 5 HOH A 79 1079 1079 HOH HOH . H 5 HOH A 80 1080 1080 HOH HOH . H 5 HOH A 81 1081 1081 HOH HOH . H 5 HOH A 82 1082 1082 HOH HOH . H 5 HOH A 83 1083 1083 HOH HOH . H 5 HOH A 84 1084 1084 HOH HOH . H 5 HOH A 85 1085 1085 HOH HOH . H 5 HOH A 86 1086 1086 HOH HOH . H 5 HOH A 87 1087 1087 HOH HOH . H 5 HOH A 88 1088 1088 HOH HOH . H 5 HOH A 89 1089 1089 HOH HOH . H 5 HOH A 90 1090 1090 HOH HOH . H 5 HOH A 91 1091 1091 HOH HOH . H 5 HOH A 92 1092 1092 HOH HOH . H 5 HOH A 93 1093 1093 HOH HOH . H 5 HOH A 94 1094 1094 HOH HOH . H 5 HOH A 95 1095 1095 HOH HOH . H 5 HOH A 96 1096 1096 HOH HOH . H 5 HOH A 97 1097 1097 HOH HOH . H 5 HOH A 98 1098 1098 HOH HOH . H 5 HOH A 99 1099 1099 HOH HOH . H 5 HOH A 100 1100 1100 HOH HOH . H 5 HOH A 101 1101 1101 HOH HOH . H 5 HOH A 102 1102 1102 HOH HOH . H 5 HOH A 103 1103 1103 HOH HOH . H 5 HOH A 104 1104 1104 HOH HOH . H 5 HOH A 105 1105 1105 HOH HOH . H 5 HOH A 106 1106 1106 HOH HOH . H 5 HOH A 107 1107 1107 HOH HOH . H 5 HOH A 108 1108 1108 HOH HOH . H 5 HOH A 109 1109 1109 HOH HOH . H 5 HOH A 110 1110 1110 HOH HOH . H 5 HOH A 111 1111 1111 HOH HOH . H 5 HOH A 112 1112 1112 HOH HOH . H 5 HOH A 113 1113 1113 HOH HOH . H 5 HOH A 114 1114 1114 HOH HOH . H 5 HOH A 115 1115 1115 HOH HOH . H 5 HOH A 116 1116 1116 HOH HOH . H 5 HOH A 117 1117 1117 HOH HOH . H 5 HOH A 118 1118 1118 HOH HOH . H 5 HOH A 119 1119 1119 HOH HOH . H 5 HOH A 120 1120 1120 HOH HOH . H 5 HOH A 121 1121 1121 HOH HOH . H 5 HOH A 122 1122 1122 HOH HOH . H 5 HOH A 123 1123 1123 HOH HOH . H 5 HOH A 124 1124 1124 HOH HOH . H 5 HOH A 125 1125 1125 HOH HOH . H 5 HOH A 126 1126 1126 HOH HOH . H 5 HOH A 127 1127 1127 HOH HOH . H 5 HOH A 128 1128 1128 HOH HOH . H 5 HOH A 129 1129 1129 HOH HOH . H 5 HOH A 130 1130 1130 HOH HOH . H 5 HOH A 131 1131 1131 HOH HOH . H 5 HOH A 132 1132 1132 HOH HOH . H 5 HOH A 133 1133 1133 HOH HOH . H 5 HOH A 134 1134 1134 HOH HOH . H 5 HOH A 135 1135 1135 HOH HOH . H 5 HOH A 136 1136 1136 HOH HOH . H 5 HOH A 137 1137 1137 HOH HOH . H 5 HOH A 138 1138 1138 HOH HOH . H 5 HOH A 139 1139 1139 HOH HOH . H 5 HOH A 140 1140 1140 HOH HOH . H 5 HOH A 141 1141 1141 HOH HOH . H 5 HOH A 142 1142 1142 HOH HOH . H 5 HOH A 143 1143 1143 HOH HOH . H 5 HOH A 144 1144 1144 HOH HOH . H 5 HOH A 145 1145 1145 HOH HOH . H 5 HOH A 146 1146 1146 HOH HOH . H 5 HOH A 147 1147 1147 HOH HOH . H 5 HOH A 148 1148 1148 HOH HOH . H 5 HOH A 149 1149 1149 HOH HOH . H 5 HOH A 150 1150 1150 HOH HOH . H 5 HOH A 151 1151 1151 HOH HOH . H 5 HOH A 152 1152 1152 HOH HOH . H 5 HOH A 153 1153 1153 HOH HOH . H 5 HOH A 154 1154 1154 HOH HOH . H 5 HOH A 155 1155 1155 HOH HOH . H 5 HOH A 156 1156 1156 HOH HOH . H 5 HOH A 157 1157 1157 HOH HOH . H 5 HOH A 158 1158 1158 HOH HOH . H 5 HOH A 159 1159 1159 HOH HOH . H 5 HOH A 160 1160 1160 HOH HOH . H 5 HOH A 161 1161 1161 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BXA . . . G 4 36.565 42.348 -2.987 0.54 25.38 ? C1 BXA 601 A 1 HETATM 2 O O1 BXA . . . G 4 37.746 42.477 -3.608 0.54 11.9 ? O1 BXA 601 A 1 HETATM 3 C C2 BXA . . . G 4 36.607 42.734 -1.521 0.54 25.93 ? C2 BXA 601 A 1 HETATM 4 O O2 BXA . . . G 4 35.669 41.673 -3.478 0.54 23.54 ? O2 BXA 601 A 1 HETATM 5 BR BR2 BXA . . . G 4 37.689 44.3 -1.082 0.54 36.03 ? BR2 BXA 601 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #