data_3NPR # _model_server_result.job_id XBLQVNU-qH4tCIywRNf8jw _model_server_result.datetime_utc '2024-11-26 01:59:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3npr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1002}' # _entry.id 3NPR # _exptl.entry_id 3NPR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3NPR _cell.length_a 80.571 _cell.length_b 80.571 _cell.length_c 91.672 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NPR _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O HIS 24 A HIS 18 1_555 D MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc2 A OD2 ASP 178 A ASP 172 1_555 C MG MG . A MG 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc3 C MG MG . A MG 288 1_555 E O HOH . A HOH 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc4 C MG MG . A MG 288 1_555 E O HOH . A HOH 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc5 E O HOH . A HOH 430 1_555 D MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc6 E O HOH . A HOH 467 1_555 D MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? metalc ? metalc7 B OAJ PS7 . A PS7 1001 1_555 D MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc8 B OAI PS7 . A PS7 1001 1_555 D MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3NPR _atom_sites.fract_transf_matrix[1][1] 0.012411 _atom_sites.fract_transf_matrix[1][2] 0.007166 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014331 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010908 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PS7 A 1 1001 1001 PS7 PS7 . C 3 MG A 1 288 1001 MG MG . D 3 MG A 1 1002 1002 MG MG . E 4 HOH A 1 289 1 HOH HOH . E 4 HOH A 2 290 2 HOH HOH . E 4 HOH A 3 291 3 HOH HOH . E 4 HOH A 4 292 4 HOH HOH . E 4 HOH A 5 293 5 HOH HOH . E 4 HOH A 6 294 6 HOH HOH . E 4 HOH A 7 295 7 HOH HOH . E 4 HOH A 8 296 8 HOH HOH . E 4 HOH A 9 297 9 HOH HOH . E 4 HOH A 10 298 10 HOH HOH . E 4 HOH A 11 299 11 HOH HOH . E 4 HOH A 12 300 12 HOH HOH . E 4 HOH A 13 301 13 HOH HOH . E 4 HOH A 14 302 14 HOH HOH . E 4 HOH A 15 303 15 HOH HOH . E 4 HOH A 16 304 16 HOH HOH . E 4 HOH A 17 305 17 HOH HOH . E 4 HOH A 18 306 18 HOH HOH . E 4 HOH A 19 307 19 HOH HOH . E 4 HOH A 20 308 20 HOH HOH . E 4 HOH A 21 309 21 HOH HOH . E 4 HOH A 22 310 22 HOH HOH . E 4 HOH A 23 311 23 HOH HOH . E 4 HOH A 24 312 24 HOH HOH . E 4 HOH A 25 313 25 HOH HOH . E 4 HOH A 26 314 26 HOH HOH . E 4 HOH A 27 315 27 HOH HOH . E 4 HOH A 28 316 28 HOH HOH . E 4 HOH A 29 317 29 HOH HOH . E 4 HOH A 30 318 30 HOH HOH . E 4 HOH A 31 319 31 HOH HOH . E 4 HOH A 32 320 32 HOH HOH . E 4 HOH A 33 321 33 HOH HOH . E 4 HOH A 34 322 34 HOH HOH . E 4 HOH A 35 323 35 HOH HOH . E 4 HOH A 36 324 36 HOH HOH . E 4 HOH A 37 325 37 HOH HOH . E 4 HOH A 38 326 38 HOH HOH . E 4 HOH A 39 327 39 HOH HOH . E 4 HOH A 40 328 40 HOH HOH . E 4 HOH A 41 329 41 HOH HOH . E 4 HOH A 42 330 42 HOH HOH . E 4 HOH A 43 331 43 HOH HOH . E 4 HOH A 44 332 44 HOH HOH . E 4 HOH A 45 333 45 HOH HOH . E 4 HOH A 46 334 46 HOH HOH . E 4 HOH A 47 335 47 HOH HOH . E 4 HOH A 48 336 48 HOH HOH . E 4 HOH A 49 337 49 HOH HOH . E 4 HOH A 50 338 50 HOH HOH . E 4 HOH A 51 339 51 HOH HOH . E 4 HOH A 52 340 52 HOH HOH . E 4 HOH A 53 341 53 HOH HOH . E 4 HOH A 54 342 54 HOH HOH . E 4 HOH A 55 343 55 HOH HOH . E 4 HOH A 56 344 56 HOH HOH . E 4 HOH A 57 345 57 HOH HOH . E 4 HOH A 58 346 58 HOH HOH . E 4 HOH A 59 347 59 HOH HOH . E 4 HOH A 60 348 60 HOH HOH . E 4 HOH A 61 349 61 HOH HOH . E 4 HOH A 62 350 62 HOH HOH . E 4 HOH A 63 351 63 HOH HOH . E 4 HOH A 64 352 64 HOH HOH . E 4 HOH A 65 353 65 HOH HOH . E 4 HOH A 66 354 66 HOH HOH . E 4 HOH A 67 355 67 HOH HOH . E 4 HOH A 68 356 68 HOH HOH . E 4 HOH A 69 357 69 HOH HOH . E 4 HOH A 70 358 70 HOH HOH . E 4 HOH A 71 359 71 HOH HOH . E 4 HOH A 72 360 72 HOH HOH . E 4 HOH A 73 361 73 HOH HOH . E 4 HOH A 74 362 74 HOH HOH . E 4 HOH A 75 363 75 HOH HOH . E 4 HOH A 76 364 76 HOH HOH . E 4 HOH A 77 365 77 HOH HOH . E 4 HOH A 78 366 78 HOH HOH . E 4 HOH A 79 367 79 HOH HOH . E 4 HOH A 80 368 80 HOH HOH . E 4 HOH A 81 369 81 HOH HOH . E 4 HOH A 82 370 82 HOH HOH . E 4 HOH A 83 371 83 HOH HOH . E 4 HOH A 84 372 84 HOH HOH . E 4 HOH A 85 373 85 HOH HOH . E 4 HOH A 86 374 86 HOH HOH . E 4 HOH A 87 375 87 HOH HOH . E 4 HOH A 88 376 88 HOH HOH . E 4 HOH A 89 377 89 HOH HOH . E 4 HOH A 90 378 90 HOH HOH . E 4 HOH A 91 379 91 HOH HOH . E 4 HOH A 92 380 92 HOH HOH . E 4 HOH A 93 381 93 HOH HOH . E 4 HOH A 94 382 94 HOH HOH . E 4 HOH A 95 383 95 HOH HOH . E 4 HOH A 96 384 96 HOH HOH . E 4 HOH A 97 385 97 HOH HOH . E 4 HOH A 98 386 98 HOH HOH . E 4 HOH A 99 387 99 HOH HOH . E 4 HOH A 100 388 100 HOH HOH . E 4 HOH A 101 389 101 HOH HOH . E 4 HOH A 102 390 102 HOH HOH . E 4 HOH A 103 391 103 HOH HOH . E 4 HOH A 104 392 104 HOH HOH . E 4 HOH A 105 393 105 HOH HOH . E 4 HOH A 106 394 106 HOH HOH . E 4 HOH A 107 395 107 HOH HOH . E 4 HOH A 108 396 108 HOH HOH . E 4 HOH A 109 397 109 HOH HOH . E 4 HOH A 110 398 110 HOH HOH . E 4 HOH A 111 399 111 HOH HOH . E 4 HOH A 112 400 112 HOH HOH . E 4 HOH A 113 401 113 HOH HOH . E 4 HOH A 114 402 114 HOH HOH . E 4 HOH A 115 403 115 HOH HOH . E 4 HOH A 116 404 116 HOH HOH . E 4 HOH A 117 405 117 HOH HOH . E 4 HOH A 118 406 118 HOH HOH . E 4 HOH A 119 407 119 HOH HOH . E 4 HOH A 120 408 120 HOH HOH . E 4 HOH A 121 409 121 HOH HOH . E 4 HOH A 122 410 122 HOH HOH . E 4 HOH A 123 411 123 HOH HOH . E 4 HOH A 124 412 124 HOH HOH . E 4 HOH A 125 413 125 HOH HOH . E 4 HOH A 126 414 126 HOH HOH . E 4 HOH A 127 415 127 HOH HOH . E 4 HOH A 128 416 128 HOH HOH . E 4 HOH A 129 417 129 HOH HOH . E 4 HOH A 130 418 130 HOH HOH . E 4 HOH A 131 419 131 HOH HOH . E 4 HOH A 132 420 132 HOH HOH . E 4 HOH A 133 421 133 HOH HOH . E 4 HOH A 134 422 134 HOH HOH . E 4 HOH A 135 423 135 HOH HOH . E 4 HOH A 136 424 136 HOH HOH . E 4 HOH A 137 425 137 HOH HOH . E 4 HOH A 138 426 138 HOH HOH . E 4 HOH A 139 427 139 HOH HOH . E 4 HOH A 140 428 140 HOH HOH . E 4 HOH A 141 429 141 HOH HOH . E 4 HOH A 142 430 142 HOH HOH . E 4 HOH A 143 431 143 HOH HOH . E 4 HOH A 144 432 144 HOH HOH . E 4 HOH A 145 433 145 HOH HOH . E 4 HOH A 146 434 146 HOH HOH . E 4 HOH A 147 435 147 HOH HOH . E 4 HOH A 148 436 148 HOH HOH . E 4 HOH A 149 437 149 HOH HOH . E 4 HOH A 150 438 150 HOH HOH . E 4 HOH A 151 439 151 HOH HOH . E 4 HOH A 152 440 152 HOH HOH . E 4 HOH A 153 441 153 HOH HOH . E 4 HOH A 154 442 154 HOH HOH . E 4 HOH A 155 443 155 HOH HOH . E 4 HOH A 156 444 156 HOH HOH . E 4 HOH A 157 445 157 HOH HOH . E 4 HOH A 158 446 158 HOH HOH . E 4 HOH A 159 447 159 HOH HOH . E 4 HOH A 160 448 160 HOH HOH . E 4 HOH A 161 449 161 HOH HOH . E 4 HOH A 162 450 162 HOH HOH . E 4 HOH A 163 451 163 HOH HOH . E 4 HOH A 164 452 164 HOH HOH . E 4 HOH A 165 453 165 HOH HOH . E 4 HOH A 166 454 166 HOH HOH . E 4 HOH A 167 455 167 HOH HOH . E 4 HOH A 168 456 168 HOH HOH . E 4 HOH A 169 457 169 HOH HOH . E 4 HOH A 170 458 170 HOH HOH . E 4 HOH A 171 459 171 HOH HOH . E 4 HOH A 172 460 172 HOH HOH . E 4 HOH A 173 461 173 HOH HOH . E 4 HOH A 174 462 174 HOH HOH . E 4 HOH A 175 463 175 HOH HOH . E 4 HOH A 176 464 176 HOH HOH . E 4 HOH A 177 465 177 HOH HOH . E 4 HOH A 178 466 178 HOH HOH . E 4 HOH A 179 467 179 HOH HOH . E 4 HOH A 180 468 180 HOH HOH . E 4 HOH A 181 469 181 HOH HOH . E 4 HOH A 182 470 182 HOH HOH . E 4 HOH A 183 471 183 HOH HOH . E 4 HOH A 184 472 184 HOH HOH . E 4 HOH A 185 473 185 HOH HOH . E 4 HOH A 186 474 186 HOH HOH . E 4 HOH A 187 475 187 HOH HOH . E 4 HOH A 188 476 188 HOH HOH . E 4 HOH A 189 477 189 HOH HOH . E 4 HOH A 190 478 190 HOH HOH . E 4 HOH A 191 479 191 HOH HOH . E 4 HOH A 192 480 192 HOH HOH . E 4 HOH A 193 481 193 HOH HOH . E 4 HOH A 194 482 194 HOH HOH . E 4 HOH A 195 483 195 HOH HOH . E 4 HOH A 196 484 196 HOH HOH . E 4 HOH A 197 485 197 HOH HOH . E 4 HOH A 198 486 198 HOH HOH . E 4 HOH A 199 487 199 HOH HOH . E 4 HOH A 200 488 200 HOH HOH . E 4 HOH A 201 489 201 HOH HOH . E 4 HOH A 202 490 202 HOH HOH . E 4 HOH A 203 491 203 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 23.354 _atom_site.Cartn_y -5.02 _atom_site.Cartn_z 11.508 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1002 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #