data_3NR1 # _model_server_result.job_id 8VdOiVb5Tzpdkcevh4ALEA _model_server_result.datetime_utc '2024-11-04 20:08:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nr1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":199}' # _entry.id 3NR1 # _exptl.entry_id 3NR1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.3 _cell.angle_gamma 90 _cell.entry_id 3NR1 _cell.length_a 53.9 _cell.length_b 62.4 _cell.length_c 53.9 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NR1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 34 A HIS 35 1_555 C MN MN . A MN 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc2 A NE2 HIS 60 A HIS 61 1_555 C MN MN . A MN 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc3 A OD2 ASP 61 A ASP 62 1_555 C MN MN . A MN 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc4 A OD1 ASP 121 A ASP 122 1_555 C MN MN . A MN 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc5 C MN MN . A MN 199 1_555 E O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc6 B NE2 HIS 34 B HIS 35 1_555 D MN MN . B MN 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc7 B NE2 HIS 60 B HIS 61 1_555 D MN MN . B MN 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc8 B OD2 ASP 61 B ASP 62 1_555 D MN MN . B MN 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? metalc ? metalc9 B OD1 ASP 121 B ASP 122 1_555 D MN MN . B MN 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc10 D MN MN . B MN 199 1_555 F O HOH . B HOH 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3NR1 _atom_sites.fract_transf_matrix[1][1] 0.018553 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001721 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016026 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018633 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 199 199 MN MN . D 2 MN B 1 199 199 MN MN . E 3 HOH A 1 200 200 HOH HOH . E 3 HOH A 2 201 201 HOH HOH . E 3 HOH A 3 202 202 HOH HOH . E 3 HOH A 4 203 203 HOH HOH . E 3 HOH A 5 204 204 HOH HOH . E 3 HOH A 6 205 200 HOH HOH . E 3 HOH A 7 206 206 HOH HOH . E 3 HOH A 8 207 207 HOH HOH . E 3 HOH A 9 208 208 HOH HOH . E 3 HOH A 10 209 209 HOH HOH . E 3 HOH A 11 210 210 HOH HOH . E 3 HOH A 12 211 211 HOH HOH . E 3 HOH A 13 212 212 HOH HOH . E 3 HOH A 14 213 213 HOH HOH . E 3 HOH A 15 214 214 HOH HOH . E 3 HOH A 16 215 215 HOH HOH . E 3 HOH A 17 216 216 HOH HOH . E 3 HOH A 18 217 217 HOH HOH . E 3 HOH A 19 218 218 HOH HOH . E 3 HOH A 20 219 219 HOH HOH . E 3 HOH A 21 220 220 HOH HOH . E 3 HOH A 22 221 221 HOH HOH . E 3 HOH A 23 222 222 HOH HOH . E 3 HOH A 24 223 223 HOH HOH . E 3 HOH A 25 224 224 HOH HOH . E 3 HOH A 26 225 225 HOH HOH . E 3 HOH A 27 226 226 HOH HOH . E 3 HOH A 28 227 227 HOH HOH . E 3 HOH A 29 228 228 HOH HOH . E 3 HOH A 30 229 229 HOH HOH . E 3 HOH A 31 230 230 HOH HOH . E 3 HOH A 32 231 231 HOH HOH . E 3 HOH A 33 232 201 HOH HOH . E 3 HOH A 34 233 233 HOH HOH . E 3 HOH A 35 234 234 HOH HOH . E 3 HOH A 36 235 235 HOH HOH . E 3 HOH A 37 236 236 HOH HOH . E 3 HOH A 38 237 237 HOH HOH . E 3 HOH A 39 238 238 HOH HOH . E 3 HOH A 40 239 239 HOH HOH . E 3 HOH A 41 240 240 HOH HOH . E 3 HOH A 42 241 241 HOH HOH . E 3 HOH A 43 242 242 HOH HOH . E 3 HOH A 44 243 243 HOH HOH . E 3 HOH A 45 244 244 HOH HOH . E 3 HOH A 46 245 245 HOH HOH . E 3 HOH A 47 246 246 HOH HOH . E 3 HOH A 48 247 247 HOH HOH . E 3 HOH A 49 248 248 HOH HOH . E 3 HOH A 50 249 249 HOH HOH . E 3 HOH A 51 250 250 HOH HOH . E 3 HOH A 52 251 251 HOH HOH . E 3 HOH A 53 252 252 HOH HOH . E 3 HOH A 54 253 253 HOH HOH . E 3 HOH A 55 254 210 HOH HOH . E 3 HOH A 56 255 255 HOH HOH . E 3 HOH A 57 256 256 HOH HOH . E 3 HOH A 58 257 257 HOH HOH . E 3 HOH A 59 258 258 HOH HOH . E 3 HOH A 60 259 259 HOH HOH . E 3 HOH A 61 260 260 HOH HOH . E 3 HOH A 62 261 261 HOH HOH . E 3 HOH A 63 262 262 HOH HOH . E 3 HOH A 64 263 223 HOH HOH . E 3 HOH A 65 264 266 HOH HOH . E 3 HOH A 66 265 265 HOH HOH . E 3 HOH A 67 266 266 HOH HOH . E 3 HOH A 68 267 267 HOH HOH . E 3 HOH A 69 268 268 HOH HOH . E 3 HOH A 70 269 269 HOH HOH . E 3 HOH A 71 270 270 HOH HOH . E 3 HOH A 72 271 271 HOH HOH . E 3 HOH A 73 272 272 HOH HOH . E 3 HOH A 74 273 273 HOH HOH . E 3 HOH A 75 274 274 HOH HOH . E 3 HOH A 76 275 275 HOH HOH . E 3 HOH A 77 276 276 HOH HOH . E 3 HOH A 78 277 277 HOH HOH . E 3 HOH A 79 278 278 HOH HOH . E 3 HOH A 80 279 279 HOH HOH . E 3 HOH A 81 280 280 HOH HOH . E 3 HOH A 82 281 281 HOH HOH . E 3 HOH A 83 282 282 HOH HOH . E 3 HOH A 84 283 283 HOH HOH . E 3 HOH A 85 284 284 HOH HOH . E 3 HOH A 86 285 285 HOH HOH . E 3 HOH A 87 286 286 HOH HOH . E 3 HOH A 88 287 287 HOH HOH . E 3 HOH A 89 288 288 HOH HOH . E 3 HOH A 90 289 289 HOH HOH . E 3 HOH A 91 290 290 HOH HOH . E 3 HOH A 92 291 291 HOH HOH . E 3 HOH A 93 292 292 HOH HOH . E 3 HOH A 94 293 293 HOH HOH . E 3 HOH A 95 294 294 HOH HOH . E 3 HOH A 96 295 295 HOH HOH . E 3 HOH A 97 296 296 HOH HOH . E 3 HOH A 98 297 297 HOH HOH . E 3 HOH A 99 298 298 HOH HOH . E 3 HOH A 100 299 299 HOH HOH . E 3 HOH A 101 300 300 HOH HOH . E 3 HOH A 102 301 301 HOH HOH . E 3 HOH A 103 302 302 HOH HOH . E 3 HOH A 104 303 303 HOH HOH . E 3 HOH A 105 304 304 HOH HOH . E 3 HOH A 106 305 305 HOH HOH . F 3 HOH B 1 202 202 HOH HOH . F 3 HOH B 2 203 203 HOH HOH . F 3 HOH B 3 204 204 HOH HOH . F 3 HOH B 4 205 205 HOH HOH . F 3 HOH B 5 206 206 HOH HOH . F 3 HOH B 6 207 207 HOH HOH . F 3 HOH B 7 208 208 HOH HOH . F 3 HOH B 8 209 209 HOH HOH . F 3 HOH B 9 210 205 HOH HOH . F 3 HOH B 10 211 211 HOH HOH . F 3 HOH B 11 212 212 HOH HOH . F 3 HOH B 12 213 213 HOH HOH . F 3 HOH B 13 214 214 HOH HOH . F 3 HOH B 14 215 215 HOH HOH . F 3 HOH B 15 216 216 HOH HOH . F 3 HOH B 16 217 217 HOH HOH . F 3 HOH B 17 218 218 HOH HOH . F 3 HOH B 18 219 219 HOH HOH . F 3 HOH B 19 220 220 HOH HOH . F 3 HOH B 20 221 221 HOH HOH . F 3 HOH B 21 222 222 HOH HOH . F 3 HOH B 22 223 254 HOH HOH . F 3 HOH B 23 224 224 HOH HOH . F 3 HOH B 24 225 225 HOH HOH . F 3 HOH B 25 226 226 HOH HOH . F 3 HOH B 26 227 227 HOH HOH . F 3 HOH B 27 228 228 HOH HOH . F 3 HOH B 28 229 229 HOH HOH . F 3 HOH B 29 230 230 HOH HOH . F 3 HOH B 30 231 231 HOH HOH . F 3 HOH B 31 232 232 HOH HOH . F 3 HOH B 32 233 233 HOH HOH . F 3 HOH B 33 234 234 HOH HOH . F 3 HOH B 34 235 235 HOH HOH . F 3 HOH B 35 236 236 HOH HOH . F 3 HOH B 36 237 237 HOH HOH . F 3 HOH B 37 238 238 HOH HOH . F 3 HOH B 38 239 239 HOH HOH . F 3 HOH B 39 240 240 HOH HOH . F 3 HOH B 40 241 241 HOH HOH . F 3 HOH B 41 242 242 HOH HOH . F 3 HOH B 42 243 243 HOH HOH . F 3 HOH B 43 244 244 HOH HOH . F 3 HOH B 44 245 245 HOH HOH . F 3 HOH B 45 246 246 HOH HOH . F 3 HOH B 46 247 247 HOH HOH . F 3 HOH B 47 248 248 HOH HOH . F 3 HOH B 48 249 249 HOH HOH . F 3 HOH B 49 250 250 HOH HOH . F 3 HOH B 50 251 251 HOH HOH . F 3 HOH B 51 252 252 HOH HOH . F 3 HOH B 52 253 253 HOH HOH . F 3 HOH B 53 254 254 HOH HOH . F 3 HOH B 54 255 255 HOH HOH . F 3 HOH B 55 256 256 HOH HOH . F 3 HOH B 56 257 257 HOH HOH . F 3 HOH B 57 258 258 HOH HOH . F 3 HOH B 58 259 259 HOH HOH . F 3 HOH B 59 260 260 HOH HOH . F 3 HOH B 60 261 261 HOH HOH . F 3 HOH B 61 262 262 HOH HOH . F 3 HOH B 62 263 263 HOH HOH . F 3 HOH B 63 264 264 HOH HOH . F 3 HOH B 64 265 265 HOH HOH . F 3 HOH B 65 266 264 HOH HOH . F 3 HOH B 66 267 267 HOH HOH . F 3 HOH B 67 268 268 HOH HOH . F 3 HOH B 68 269 269 HOH HOH . F 3 HOH B 69 270 270 HOH HOH . F 3 HOH B 70 271 271 HOH HOH . F 3 HOH B 71 273 273 HOH HOH . F 3 HOH B 72 274 274 HOH HOH . F 3 HOH B 73 275 275 HOH HOH . F 3 HOH B 74 276 276 HOH HOH . F 3 HOH B 75 277 277 HOH HOH . F 3 HOH B 76 279 279 HOH HOH . F 3 HOH B 77 280 280 HOH HOH . F 3 HOH B 78 281 281 HOH HOH . F 3 HOH B 79 282 282 HOH HOH . F 3 HOH B 80 283 283 HOH HOH . F 3 HOH B 81 284 284 HOH HOH . F 3 HOH B 82 285 285 HOH HOH . F 3 HOH B 83 286 286 HOH HOH . F 3 HOH B 84 288 288 HOH HOH . F 3 HOH B 85 289 289 HOH HOH . F 3 HOH B 86 290 290 HOH HOH . F 3 HOH B 87 291 291 HOH HOH . F 3 HOH B 88 292 292 HOH HOH . F 3 HOH B 89 293 293 HOH HOH . F 3 HOH B 90 294 294 HOH HOH . F 3 HOH B 91 295 295 HOH HOH . F 3 HOH B 92 296 296 HOH HOH . F 3 HOH B 93 297 297 HOH HOH . F 3 HOH B 94 298 298 HOH HOH . F 3 HOH B 95 299 299 HOH HOH . F 3 HOH B 96 300 300 HOH HOH . F 3 HOH B 97 301 301 HOH HOH . F 3 HOH B 98 302 302 HOH HOH . F 3 HOH B 99 303 303 HOH HOH . F 3 HOH B 100 304 304 HOH HOH . F 3 HOH B 101 305 305 HOH HOH . F 3 HOH B 102 306 306 HOH HOH . F 3 HOH B 103 307 307 HOH HOH . F 3 HOH B 104 308 308 HOH HOH . F 3 HOH B 105 309 309 HOH HOH . F 3 HOH B 106 310 310 HOH HOH . F 3 HOH B 107 311 311 HOH HOH . F 3 HOH B 108 312 312 HOH HOH . F 3 HOH B 109 313 313 HOH HOH . F 3 HOH B 110 314 314 HOH HOH . F 3 HOH B 111 315 315 HOH HOH . F 3 HOH B 112 316 316 HOH HOH . F 3 HOH B 113 317 317 HOH HOH . F 3 HOH B 114 318 318 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 20.515 _atom_site.Cartn_y -0.017 _atom_site.Cartn_z 23.2 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 199 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #