data_3NRC
#
_model_server_result.job_id            3C5Nk0WHH8AxFtJoURn7rA 
_model_server_result.datetime_utc      '2024-10-13 22:23:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3nrc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":261}' 
#
_entry.id    3NRC 
#
_exptl.entry_id    3NRC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3NRC 
_cell.length_a            123.08 
_cell.length_b            85.12 
_cell.length_c            51.76 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3NRC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -85.12 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 237 n n 
PA O2A NAD sing 238 n n 
PA O5B NAD sing 239 n n 
PA O3 NAD sing 240 n n 
O2A HOA2 NAD sing 241 n n 
O5B C5B NAD sing 242 n n 
C5B C4B NAD sing 243 n n 
C5B H51A NAD sing 244 n n 
C5B H52A NAD sing 245 n n 
C4B O4B NAD sing 246 n n 
C4B C3B NAD sing 247 n n 
C4B H4B NAD sing 248 n n 
O4B C1B NAD sing 249 n n 
C3B O3B NAD sing 250 n n 
C3B C2B NAD sing 251 n n 
C3B H3B NAD sing 252 n n 
O3B HO3A NAD sing 253 n n 
C2B O2B NAD sing 254 n n 
C2B C1B NAD sing 255 n n 
C2B H2B NAD sing 256 n n 
O2B HO2A NAD sing 257 n n 
C1B N9A NAD sing 258 n n 
C1B H1B NAD sing 259 n n 
N9A C8A NAD sing 260 n y 
N9A C4A NAD sing 261 n y 
C8A N7A NAD doub 262 n y 
C8A H8A NAD sing 263 n n 
N7A C5A NAD sing 264 n y 
C5A C6A NAD sing 265 n y 
C5A C4A NAD doub 266 n y 
C6A N6A NAD sing 267 n n 
C6A N1A NAD doub 268 n y 
N6A H61A NAD sing 269 n n 
N6A H62A NAD sing 270 n n 
N1A C2A NAD sing 271 n y 
C2A N3A NAD doub 272 n y 
C2A H2A NAD sing 273 n n 
N3A C4A NAD sing 274 n y 
O3 PN NAD sing 275 n n 
PN O1N NAD doub 276 n n 
PN O2N NAD sing 277 n n 
PN O5D NAD sing 278 n n 
O5D C5D NAD sing 279 n n 
C5D C4D NAD sing 280 n n 
C5D H51N NAD sing 281 n n 
C5D H52N NAD sing 282 n n 
C4D O4D NAD sing 283 n n 
C4D C3D NAD sing 284 n n 
C4D H4D NAD sing 285 n n 
O4D C1D NAD sing 286 n n 
C3D O3D NAD sing 287 n n 
C3D C2D NAD sing 288 n n 
C3D H3D NAD sing 289 n n 
O3D HO3N NAD sing 290 n n 
C2D O2D NAD sing 291 n n 
C2D C1D NAD sing 292 n n 
C2D H2D NAD sing 293 n n 
O2D HO2N NAD sing 294 n n 
C1D N1N NAD sing 295 n n 
C1D H1D NAD sing 296 n n 
N1N C2N NAD sing 297 n y 
N1N C6N NAD doub 298 n y 
C2N C3N NAD doub 299 n y 
C2N H2N NAD sing 300 n n 
C3N C7N NAD sing 301 n n 
C3N C4N NAD sing 302 n y 
C7N O7N NAD doub 303 n n 
C7N N7N NAD sing 304 n n 
N7N H71N NAD sing 305 n n 
N7N H72N NAD sing 306 n n 
C4N C5N NAD doub 307 n y 
C4N H4N NAD sing 308 n n 
C5N C6N NAD sing 309 n y 
C5N H5N NAD sing 310 n n 
C6N H6N NAD sing 311 n n 
#
_atom_sites.entry_id                     3NRC 
_atom_sites.fract_transf_matrix[1][1]    0.008125 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011748 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01932 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAD A 1 261 1 NAD NAD . 
D 3 TCL A 1 262 1 TCL TCL . 
E 2 NAD B 1 261 2 NAD NAD . 
F 3 TCL B 1 262 2 TCL TCL . 
G 4 HOH A 1 263 1 HOH HOH . 
G 4 HOH A 2 264 2 HOH HOH . 
G 4 HOH A 3 265 3 HOH HOH . 
G 4 HOH A 4 266 6 HOH HOH . 
G 4 HOH A 5 267 7 HOH HOH . 
G 4 HOH A 6 268 9 HOH HOH . 
G 4 HOH A 7 269 12 HOH HOH . 
G 4 HOH A 8 270 13 HOH HOH . 
G 4 HOH A 9 271 14 HOH HOH . 
G 4 HOH A 10 272 22 HOH HOH . 
G 4 HOH A 11 273 25 HOH HOH . 
G 4 HOH A 12 274 26 HOH HOH . 
G 4 HOH A 13 275 28 HOH HOH . 
G 4 HOH A 14 276 30 HOH HOH . 
G 4 HOH A 15 277 33 HOH HOH . 
G 4 HOH A 16 278 34 HOH HOH . 
G 4 HOH A 17 279 35 HOH HOH . 
G 4 HOH A 18 280 36 HOH HOH . 
G 4 HOH A 19 281 38 HOH HOH . 
G 4 HOH A 20 282 42 HOH HOH . 
G 4 HOH A 21 283 45 HOH HOH . 
G 4 HOH A 22 284 48 HOH HOH . 
G 4 HOH A 23 285 49 HOH HOH . 
G 4 HOH A 24 286 51 HOH HOH . 
G 4 HOH A 25 287 56 HOH HOH . 
G 4 HOH A 26 288 57 HOH HOH . 
G 4 HOH A 27 289 58 HOH HOH . 
G 4 HOH A 28 290 59 HOH HOH . 
G 4 HOH A 29 291 60 HOH HOH . 
G 4 HOH A 30 292 61 HOH HOH . 
G 4 HOH A 31 293 66 HOH HOH . 
G 4 HOH A 32 294 68 HOH HOH . 
G 4 HOH A 33 295 70 HOH HOH . 
G 4 HOH A 34 296 71 HOH HOH . 
G 4 HOH A 35 297 75 HOH HOH . 
G 4 HOH A 36 298 76 HOH HOH . 
G 4 HOH A 37 299 79 HOH HOH . 
G 4 HOH A 38 300 81 HOH HOH . 
G 4 HOH A 39 301 82 HOH HOH . 
G 4 HOH A 40 302 83 HOH HOH . 
G 4 HOH A 41 303 84 HOH HOH . 
G 4 HOH A 42 304 85 HOH HOH . 
G 4 HOH A 43 305 87 HOH HOH . 
G 4 HOH A 44 306 89 HOH HOH . 
G 4 HOH A 45 307 91 HOH HOH . 
G 4 HOH A 46 308 92 HOH HOH . 
G 4 HOH A 47 309 93 HOH HOH . 
G 4 HOH A 48 310 94 HOH HOH . 
G 4 HOH A 49 311 95 HOH HOH . 
G 4 HOH A 50 312 100 HOH HOH . 
G 4 HOH A 51 313 101 HOH HOH . 
G 4 HOH A 52 314 102 HOH HOH . 
G 4 HOH A 53 315 104 HOH HOH . 
G 4 HOH A 54 316 105 HOH HOH . 
G 4 HOH A 55 317 106 HOH HOH . 
G 4 HOH A 56 318 107 HOH HOH . 
G 4 HOH A 57 319 108 HOH HOH . 
G 4 HOH A 58 320 109 HOH HOH . 
G 4 HOH A 59 321 110 HOH HOH . 
G 4 HOH A 60 322 111 HOH HOH . 
G 4 HOH A 61 323 112 HOH HOH . 
G 4 HOH A 62 324 114 HOH HOH . 
G 4 HOH A 63 325 116 HOH HOH . 
G 4 HOH A 64 326 119 HOH HOH . 
G 4 HOH A 65 327 120 HOH HOH . 
G 4 HOH A 66 328 121 HOH HOH . 
G 4 HOH A 67 329 122 HOH HOH . 
G 4 HOH A 68 330 123 HOH HOH . 
G 4 HOH A 69 331 125 HOH HOH . 
G 4 HOH A 70 332 127 HOH HOH . 
G 4 HOH A 71 333 129 HOH HOH . 
G 4 HOH A 72 334 130 HOH HOH . 
G 4 HOH A 73 335 131 HOH HOH . 
G 4 HOH A 74 336 133 HOH HOH . 
G 4 HOH A 75 337 134 HOH HOH . 
G 4 HOH A 76 338 135 HOH HOH . 
G 4 HOH A 77 339 137 HOH HOH . 
G 4 HOH A 78 340 140 HOH HOH . 
G 4 HOH A 79 341 142 HOH HOH . 
H 4 HOH B 1 263 4 HOH HOH . 
H 4 HOH B 2 264 5 HOH HOH . 
H 4 HOH B 3 265 8 HOH HOH . 
H 4 HOH B 4 266 10 HOH HOH . 
H 4 HOH B 5 267 11 HOH HOH . 
H 4 HOH B 6 268 15 HOH HOH . 
H 4 HOH B 7 269 16 HOH HOH . 
H 4 HOH B 8 270 17 HOH HOH . 
H 4 HOH B 9 271 18 HOH HOH . 
H 4 HOH B 10 272 19 HOH HOH . 
H 4 HOH B 11 273 20 HOH HOH . 
H 4 HOH B 12 274 21 HOH HOH . 
H 4 HOH B 13 275 23 HOH HOH . 
H 4 HOH B 14 276 24 HOH HOH . 
H 4 HOH B 15 277 27 HOH HOH . 
H 4 HOH B 16 278 29 HOH HOH . 
H 4 HOH B 17 279 31 HOH HOH . 
H 4 HOH B 18 280 32 HOH HOH . 
H 4 HOH B 19 281 37 HOH HOH . 
H 4 HOH B 20 282 39 HOH HOH . 
H 4 HOH B 21 283 40 HOH HOH . 
H 4 HOH B 22 284 41 HOH HOH . 
H 4 HOH B 23 285 43 HOH HOH . 
H 4 HOH B 24 286 44 HOH HOH . 
H 4 HOH B 25 287 46 HOH HOH . 
H 4 HOH B 26 288 47 HOH HOH . 
H 4 HOH B 27 289 50 HOH HOH . 
H 4 HOH B 28 290 52 HOH HOH . 
H 4 HOH B 29 291 53 HOH HOH . 
H 4 HOH B 30 292 54 HOH HOH . 
H 4 HOH B 31 293 55 HOH HOH . 
H 4 HOH B 32 294 62 HOH HOH . 
H 4 HOH B 33 295 63 HOH HOH . 
H 4 HOH B 34 296 64 HOH HOH . 
H 4 HOH B 35 297 65 HOH HOH . 
H 4 HOH B 36 298 67 HOH HOH . 
H 4 HOH B 37 299 69 HOH HOH . 
H 4 HOH B 38 300 72 HOH HOH . 
H 4 HOH B 39 301 73 HOH HOH . 
H 4 HOH B 40 302 74 HOH HOH . 
H 4 HOH B 41 303 77 HOH HOH . 
H 4 HOH B 42 304 78 HOH HOH . 
H 4 HOH B 43 305 80 HOH HOH . 
H 4 HOH B 44 306 86 HOH HOH . 
H 4 HOH B 45 307 88 HOH HOH . 
H 4 HOH B 46 308 90 HOH HOH . 
H 4 HOH B 47 309 96 HOH HOH . 
H 4 HOH B 48 310 97 HOH HOH . 
H 4 HOH B 49 311 98 HOH HOH . 
H 4 HOH B 50 312 99 HOH HOH . 
H 4 HOH B 51 313 103 HOH HOH . 
H 4 HOH B 52 314 113 HOH HOH . 
H 4 HOH B 53 315 115 HOH HOH . 
H 4 HOH B 54 316 117 HOH HOH . 
H 4 HOH B 55 317 118 HOH HOH . 
H 4 HOH B 56 318 124 HOH HOH . 
H 4 HOH B 57 319 126 HOH HOH . 
H 4 HOH B 58 320 128 HOH HOH . 
H 4 HOH B 59 321 132 HOH HOH . 
H 4 HOH B 60 322 136 HOH HOH . 
H 4 HOH B 61 323 138 HOH HOH . 
H 4 HOH B 62 324 139 HOH HOH . 
H 4 HOH B 63 325 141 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . E 2 -25.042 -45.601 -33.768 1 29.89 ? PA NAD 261 B 1 
HETATM 2 O O1A NAD . . . E 2 -25.503 -44.529 -34.687 1 33.84 ? O1A NAD 261 B 1 
HETATM 3 O O2A NAD . . . E 2 -25.521 -46.947 -33.94 1 33 ? O2A NAD 261 B 1 
HETATM 4 O O5B NAD . . . E 2 -25.359 -45.232 -32.257 1 38.03 ? O5B NAD 261 B 1 
HETATM 5 C C5B NAD . . . E 2 -25.421 -43.82 -31.889 1 30.04 ? C5B NAD 261 B 1 
HETATM 6 C C4B NAD . . . E 2 -26.394 -43.899 -30.71 1 29.31 ? C4B NAD 261 B 1 
HETATM 7 O O4B NAD . . . E 2 -26.343 -42.711 -29.871 1 35.11 ? O4B NAD 261 B 1 
HETATM 8 C C3B NAD . . . E 2 -27.82 -44.01 -31.274 1 30.71 ? C3B NAD 261 B 1 
HETATM 9 O O3B NAD . . . E 2 -28.501 -45.131 -30.739 1 30.89 ? O3B NAD 261 B 1 
HETATM 10 C C2B NAD . . . E 2 -28.467 -42.713 -30.83 1 31.82 ? C2B NAD 261 B 1 
HETATM 11 O O2B NAD . . . E 2 -29.825 -43.078 -30.679 1 36.86 ? O2B NAD 261 B 1 
HETATM 12 C C1B NAD . . . E 2 -27.698 -42.48 -29.546 1 35.3 ? C1B NAD 261 B 1 
HETATM 13 N N9A NAD . . . E 2 -27.916 -41.122 -29.088 1 32.16 ? N9A NAD 261 B 1 
HETATM 14 C C8A NAD . . . E 2 -27.538 -39.944 -29.624 1 33.13 ? C8A NAD 261 B 1 
HETATM 15 N N7A NAD . . . E 2 -27.97 -38.94 -28.851 1 34.67 ? N7A NAD 261 B 1 
HETATM 16 C C5A NAD . . . E 2 -28.62 -39.555 -27.839 1 30.28 ? C5A NAD 261 B 1 
HETATM 17 C C6A NAD . . . E 2 -29.285 -38.974 -26.722 1 34.82 ? C6A NAD 261 B 1 
HETATM 18 N N6A NAD . . . E 2 -29.338 -37.67 -26.552 1 33.92 ? N6A NAD 261 B 1 
HETATM 19 N N1A NAD . . . E 2 -29.882 -39.812 -25.809 1 32.45 ? N1A NAD 261 B 1 
HETATM 20 C C2A NAD . . . E 2 -29.835 -41.165 -25.978 1 33.26 ? C2A NAD 261 B 1 
HETATM 21 N N3A NAD . . . E 2 -29.209 -41.732 -27.032 1 37.01 ? N3A NAD 261 B 1 
HETATM 22 C C4A NAD . . . E 2 -28.594 -40.924 -27.975 1 32.29 ? C4A NAD 261 B 1 
HETATM 23 O O3 NAD . . . E 2 -23.417 -45.474 -33.751 1 35.28 ? O3 NAD 261 B 1 
HETATM 24 P PN NAD . . . E 2 -22.247 -46.256 -33 1 30.28 ? PN NAD 261 B 1 
HETATM 25 O O1N NAD . . . E 2 -21.06 -46.005 -33.772 1 33.12 ? O1N NAD 261 B 1 
HETATM 26 O O2N NAD . . . E 2 -22.627 -47.695 -32.756 1 27.33 ? O2N NAD 261 B 1 
HETATM 27 O O5D NAD . . . E 2 -22.063 -45.49 -31.622 1 30.03 ? O5D NAD 261 B 1 
HETATM 28 C C5D NAD . . . E 2 -22.044 -46.22 -30.41 1 28.91 ? C5D NAD 261 B 1 
HETATM 29 C C4D NAD . . . E 2 -21.059 -45.574 -29.486 1 27.6 ? C4D NAD 261 B 1 
HETATM 30 O O4D NAD . . . E 2 -19.753 -46.035 -29.831 1 28.72 ? O4D NAD 261 B 1 
HETATM 31 C C3D NAD . . . E 2 -20.844 -44.063 -29.485 1 26.83 ? C3D NAD 261 B 1 
HETATM 32 O O3D NAD . . . E 2 -20.5 -43.632 -28.142 1 25.48 ? O3D NAD 261 B 1 
HETATM 33 C C2D NAD . . . E 2 -19.653 -43.816 -30.383 1 24.82 ? C2D NAD 261 B 1 
HETATM 34 O O2D NAD . . . E 2 -19.023 -42.547 -30.157 1 26.29 ? O2D NAD 261 B 1 
HETATM 35 C C1D NAD . . . E 2 -18.805 -44.931 -29.995 1 26.77 ? C1D NAD 261 B 1 
HETATM 36 N N1N NAD . . . E 2 -17.775 -45.303 -30.969 1 25.49 ? N1N NAD 261 B 1 
HETATM 37 C C2N NAD . . . E 2 -18.141 -45.655 -32.333 1 25.25 ? C2N NAD 261 B 1 
HETATM 38 C C3N NAD . . . E 2 -17.126 -46.016 -33.261 1 28.55 ? C3N NAD 261 B 1 
HETATM 39 C C7N NAD . . . E 2 -17.447 -46.286 -34.752 1 32.13 ? C7N NAD 261 B 1 
HETATM 40 O O7N NAD . . . E 2 -16.483 -46.393 -35.529 1 31.77 ? O7N NAD 261 B 1 
HETATM 41 N N7N NAD . . . E 2 -18.724 -46.407 -35.184 1 28.78 ? N7N NAD 261 B 1 
HETATM 42 C C4N NAD . . . E 2 -15.777 -46.024 -32.803 1 30.34 ? C4N NAD 261 B 1 
HETATM 43 C C5N NAD . . . E 2 -15.432 -45.683 -31.477 1 30.11 ? C5N NAD 261 B 1 
HETATM 44 C C6N NAD . . . E 2 -16.419 -45.326 -30.561 1 28.4 ? C6N NAD 261 B 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           44 
#