data_3NRS # _model_server_result.job_id I-CfuE-YBFN5rHslY-U8WA _model_server_result.datetime_utc '2024-11-24 00:10:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nrs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":435}' # _entry.id 3NRS # _exptl.entry_id 3NRS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3NRS _cell.length_a 62.628 _cell.length_b 83.275 _cell.length_c 126.74 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NRS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 H N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3NRS _atom_sites.fract_transf_matrix[1][1] 0.015967 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012008 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00789 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TLA A 1 1001 1001 TLA TLA . C 2 TLA A 1 1002 1002 TLA TLA . D 2 TLA A 1 1003 1003 TLA TLA . E 3 GOL A 1 1100 1100 GOL GOL . F 3 GOL A 1 1101 1101 GOL GOL . G 4 MES A 1 501 501 MES MES . H 3 GOL A 1 435 1003 GOL GOL . I 5 HOH A 1 436 1 HOH HOH . I 5 HOH A 2 437 2 HOH HOH . I 5 HOH A 3 438 3 HOH HOH . I 5 HOH A 4 439 4 HOH HOH . I 5 HOH A 5 440 5 HOH HOH . I 5 HOH A 6 441 6 HOH HOH . I 5 HOH A 7 442 7 HOH HOH . I 5 HOH A 8 443 8 HOH HOH . I 5 HOH A 9 444 9 HOH HOH . I 5 HOH A 10 445 445 HOH HOH . I 5 HOH A 11 446 10 HOH HOH . I 5 HOH A 12 447 447 HOH HOH . I 5 HOH A 13 448 448 HOH HOH . I 5 HOH A 14 449 449 HOH HOH . I 5 HOH A 15 450 450 HOH HOH . I 5 HOH A 16 451 451 HOH HOH . I 5 HOH A 17 452 11 HOH HOH . I 5 HOH A 18 453 12 HOH HOH . I 5 HOH A 19 454 454 HOH HOH . I 5 HOH A 20 455 455 HOH HOH . I 5 HOH A 21 456 13 HOH HOH . I 5 HOH A 22 457 457 HOH HOH . I 5 HOH A 23 458 458 HOH HOH . I 5 HOH A 24 459 15 HOH HOH . I 5 HOH A 25 460 16 HOH HOH . I 5 HOH A 26 461 18 HOH HOH . I 5 HOH A 27 462 19 HOH HOH . I 5 HOH A 28 463 20 HOH HOH . I 5 HOH A 29 464 464 HOH HOH . I 5 HOH A 30 465 21 HOH HOH . I 5 HOH A 31 466 22 HOH HOH . I 5 HOH A 32 467 23 HOH HOH . I 5 HOH A 33 468 26 HOH HOH . I 5 HOH A 34 469 27 HOH HOH . I 5 HOH A 35 470 28 HOH HOH . I 5 HOH A 36 471 29 HOH HOH . I 5 HOH A 37 472 30 HOH HOH . I 5 HOH A 38 473 31 HOH HOH . I 5 HOH A 39 474 474 HOH HOH . I 5 HOH A 40 475 32 HOH HOH . I 5 HOH A 41 476 34 HOH HOH . I 5 HOH A 42 477 35 HOH HOH . I 5 HOH A 43 478 478 HOH HOH . I 5 HOH A 44 479 36 HOH HOH . I 5 HOH A 45 480 37 HOH HOH . I 5 HOH A 46 481 38 HOH HOH . I 5 HOH A 47 482 40 HOH HOH . I 5 HOH A 48 483 41 HOH HOH . I 5 HOH A 49 484 42 HOH HOH . I 5 HOH A 50 485 485 HOH HOH . I 5 HOH A 51 486 486 HOH HOH . I 5 HOH A 52 487 44 HOH HOH . I 5 HOH A 53 488 45 HOH HOH . I 5 HOH A 54 489 46 HOH HOH . I 5 HOH A 55 490 490 HOH HOH . I 5 HOH A 56 491 491 HOH HOH . I 5 HOH A 57 492 492 HOH HOH . I 5 HOH A 58 493 493 HOH HOH . I 5 HOH A 59 494 494 HOH HOH . I 5 HOH A 60 495 495 HOH HOH . I 5 HOH A 61 496 496 HOH HOH . I 5 HOH A 62 497 497 HOH HOH . I 5 HOH A 63 498 498 HOH HOH . I 5 HOH A 64 499 499 HOH HOH . I 5 HOH A 65 500 47 HOH HOH . I 5 HOH A 66 502 48 HOH HOH . I 5 HOH A 67 503 503 HOH HOH . I 5 HOH A 68 504 504 HOH HOH . I 5 HOH A 69 505 505 HOH HOH . I 5 HOH A 70 506 506 HOH HOH . I 5 HOH A 71 507 507 HOH HOH . I 5 HOH A 72 508 508 HOH HOH . I 5 HOH A 73 509 509 HOH HOH . I 5 HOH A 74 510 510 HOH HOH . I 5 HOH A 75 511 511 HOH HOH . I 5 HOH A 76 512 512 HOH HOH . I 5 HOH A 77 513 513 HOH HOH . I 5 HOH A 78 514 514 HOH HOH . I 5 HOH A 79 515 515 HOH HOH . I 5 HOH A 80 516 516 HOH HOH . I 5 HOH A 81 517 517 HOH HOH . I 5 HOH A 82 518 518 HOH HOH . I 5 HOH A 83 519 49 HOH HOH . I 5 HOH A 84 520 520 HOH HOH . I 5 HOH A 85 521 521 HOH HOH . I 5 HOH A 86 522 522 HOH HOH . I 5 HOH A 87 523 523 HOH HOH . I 5 HOH A 88 524 524 HOH HOH . I 5 HOH A 89 525 525 HOH HOH . I 5 HOH A 90 526 526 HOH HOH . I 5 HOH A 91 527 527 HOH HOH . I 5 HOH A 92 528 528 HOH HOH . I 5 HOH A 93 529 529 HOH HOH . I 5 HOH A 94 530 530 HOH HOH . I 5 HOH A 95 531 531 HOH HOH . I 5 HOH A 96 532 532 HOH HOH . I 5 HOH A 97 533 533 HOH HOH . I 5 HOH A 98 534 534 HOH HOH . I 5 HOH A 99 535 535 HOH HOH . I 5 HOH A 100 536 536 HOH HOH . I 5 HOH A 101 537 537 HOH HOH . I 5 HOH A 102 538 538 HOH HOH . I 5 HOH A 103 539 539 HOH HOH . I 5 HOH A 104 540 540 HOH HOH . I 5 HOH A 105 541 541 HOH HOH . I 5 HOH A 106 542 542 HOH HOH . I 5 HOH A 107 543 543 HOH HOH . I 5 HOH A 108 544 544 HOH HOH . I 5 HOH A 109 545 545 HOH HOH . I 5 HOH A 110 546 546 HOH HOH . I 5 HOH A 111 547 547 HOH HOH . I 5 HOH A 112 548 548 HOH HOH . I 5 HOH A 113 549 50 HOH HOH . I 5 HOH A 114 550 51 HOH HOH . I 5 HOH A 115 551 52 HOH HOH . I 5 HOH A 116 552 53 HOH HOH . I 5 HOH A 117 553 54 HOH HOH . I 5 HOH A 118 554 55 HOH HOH . I 5 HOH A 119 555 57 HOH HOH . I 5 HOH A 120 556 58 HOH HOH . I 5 HOH A 121 557 59 HOH HOH . I 5 HOH A 122 558 61 HOH HOH . I 5 HOH A 123 559 63 HOH HOH . I 5 HOH A 124 560 64 HOH HOH . I 5 HOH A 125 561 65 HOH HOH . I 5 HOH A 126 562 66 HOH HOH . I 5 HOH A 127 563 68 HOH HOH . I 5 HOH A 128 564 69 HOH HOH . I 5 HOH A 129 565 70 HOH HOH . I 5 HOH A 130 566 71 HOH HOH . I 5 HOH A 131 567 72 HOH HOH . I 5 HOH A 132 568 74 HOH HOH . I 5 HOH A 133 569 77 HOH HOH . I 5 HOH A 134 570 78 HOH HOH . I 5 HOH A 135 571 79 HOH HOH . I 5 HOH A 136 572 81 HOH HOH . I 5 HOH A 137 573 82 HOH HOH . I 5 HOH A 138 574 83 HOH HOH . I 5 HOH A 139 575 84 HOH HOH . I 5 HOH A 140 576 85 HOH HOH . I 5 HOH A 141 577 87 HOH HOH . I 5 HOH A 142 578 88 HOH HOH . I 5 HOH A 143 579 89 HOH HOH . I 5 HOH A 144 580 91 HOH HOH . I 5 HOH A 145 581 93 HOH HOH . I 5 HOH A 146 582 94 HOH HOH . I 5 HOH A 147 583 97 HOH HOH . I 5 HOH A 148 584 98 HOH HOH . I 5 HOH A 149 585 99 HOH HOH . I 5 HOH A 150 586 100 HOH HOH . I 5 HOH A 151 587 101 HOH HOH . I 5 HOH A 152 588 102 HOH HOH . I 5 HOH A 153 589 103 HOH HOH . I 5 HOH A 154 590 104 HOH HOH . I 5 HOH A 155 591 105 HOH HOH . I 5 HOH A 156 592 106 HOH HOH . I 5 HOH A 157 593 108 HOH HOH . I 5 HOH A 158 594 109 HOH HOH . I 5 HOH A 159 595 110 HOH HOH . I 5 HOH A 160 596 112 HOH HOH . I 5 HOH A 161 597 113 HOH HOH . I 5 HOH A 162 598 114 HOH HOH . I 5 HOH A 163 599 115 HOH HOH . I 5 HOH A 164 600 118 HOH HOH . I 5 HOH A 165 601 121 HOH HOH . I 5 HOH A 166 602 124 HOH HOH . I 5 HOH A 167 603 125 HOH HOH . I 5 HOH A 168 604 126 HOH HOH . I 5 HOH A 169 605 131 HOH HOH . I 5 HOH A 170 606 132 HOH HOH . I 5 HOH A 171 607 133 HOH HOH . I 5 HOH A 172 608 135 HOH HOH . I 5 HOH A 173 609 136 HOH HOH . I 5 HOH A 174 610 137 HOH HOH . I 5 HOH A 175 611 138 HOH HOH . I 5 HOH A 176 612 141 HOH HOH . I 5 HOH A 177 613 143 HOH HOH . I 5 HOH A 178 614 144 HOH HOH . I 5 HOH A 179 615 145 HOH HOH . I 5 HOH A 180 616 146 HOH HOH . I 5 HOH A 181 617 147 HOH HOH . I 5 HOH A 182 618 148 HOH HOH . I 5 HOH A 183 619 149 HOH HOH . I 5 HOH A 184 620 150 HOH HOH . I 5 HOH A 185 621 152 HOH HOH . I 5 HOH A 186 622 153 HOH HOH . I 5 HOH A 187 623 154 HOH HOH . I 5 HOH A 188 624 155 HOH HOH . I 5 HOH A 189 625 156 HOH HOH . I 5 HOH A 190 626 159 HOH HOH . I 5 HOH A 191 627 164 HOH HOH . I 5 HOH A 192 628 165 HOH HOH . I 5 HOH A 193 629 166 HOH HOH . I 5 HOH A 194 630 168 HOH HOH . I 5 HOH A 195 631 171 HOH HOH . I 5 HOH A 196 632 172 HOH HOH . I 5 HOH A 197 633 173 HOH HOH . I 5 HOH A 198 634 175 HOH HOH . I 5 HOH A 199 635 177 HOH HOH . I 5 HOH A 200 636 178 HOH HOH . I 5 HOH A 201 637 180 HOH HOH . I 5 HOH A 202 638 181 HOH HOH . I 5 HOH A 203 639 182 HOH HOH . I 5 HOH A 204 640 183 HOH HOH . I 5 HOH A 205 641 184 HOH HOH . I 5 HOH A 206 642 186 HOH HOH . I 5 HOH A 207 643 189 HOH HOH . I 5 HOH A 208 644 190 HOH HOH . I 5 HOH A 209 645 191 HOH HOH . I 5 HOH A 210 646 192 HOH HOH . I 5 HOH A 211 647 193 HOH HOH . I 5 HOH A 212 648 196 HOH HOH . I 5 HOH A 213 649 197 HOH HOH . I 5 HOH A 214 650 198 HOH HOH . I 5 HOH A 215 651 201 HOH HOH . I 5 HOH A 216 652 205 HOH HOH . I 5 HOH A 217 653 211 HOH HOH . I 5 HOH A 218 654 216 HOH HOH . I 5 HOH A 219 655 217 HOH HOH . I 5 HOH A 220 656 219 HOH HOH . I 5 HOH A 221 657 224 HOH HOH . I 5 HOH A 222 658 226 HOH HOH . I 5 HOH A 223 659 228 HOH HOH . I 5 HOH A 224 660 229 HOH HOH . I 5 HOH A 225 661 231 HOH HOH . I 5 HOH A 226 662 232 HOH HOH . I 5 HOH A 227 663 233 HOH HOH . I 5 HOH A 228 664 234 HOH HOH . I 5 HOH A 229 665 236 HOH HOH . I 5 HOH A 230 666 237 HOH HOH . I 5 HOH A 231 667 239 HOH HOH . I 5 HOH A 232 668 241 HOH HOH . I 5 HOH A 233 669 244 HOH HOH . I 5 HOH A 234 670 245 HOH HOH . I 5 HOH A 235 671 248 HOH HOH . I 5 HOH A 236 672 249 HOH HOH . I 5 HOH A 237 673 253 HOH HOH . I 5 HOH A 238 674 258 HOH HOH . I 5 HOH A 239 675 260 HOH HOH . I 5 HOH A 240 676 262 HOH HOH . I 5 HOH A 241 677 265 HOH HOH . I 5 HOH A 242 678 266 HOH HOH . I 5 HOH A 243 679 269 HOH HOH . I 5 HOH A 244 680 272 HOH HOH . I 5 HOH A 245 681 274 HOH HOH . I 5 HOH A 246 682 275 HOH HOH . I 5 HOH A 247 683 280 HOH HOH . I 5 HOH A 248 684 282 HOH HOH . I 5 HOH A 249 685 285 HOH HOH . I 5 HOH A 250 686 287 HOH HOH . I 5 HOH A 251 687 294 HOH HOH . I 5 HOH A 252 688 297 HOH HOH . I 5 HOH A 253 689 300 HOH HOH . I 5 HOH A 254 690 302 HOH HOH . I 5 HOH A 255 691 304 HOH HOH . I 5 HOH A 256 692 307 HOH HOH . I 5 HOH A 257 693 308 HOH HOH . I 5 HOH A 258 694 309 HOH HOH . I 5 HOH A 259 695 312 HOH HOH . I 5 HOH A 260 696 327 HOH HOH . I 5 HOH A 261 697 338 HOH HOH . I 5 HOH A 262 698 342 HOH HOH . I 5 HOH A 263 699 343 HOH HOH . I 5 HOH A 264 700 347 HOH HOH . I 5 HOH A 265 701 349 HOH HOH . I 5 HOH A 266 702 360 HOH HOH . I 5 HOH A 267 703 415 HOH HOH . I 5 HOH A 268 704 501 HOH HOH . I 5 HOH A 269 705 1 HOH HOH . I 5 HOH A 270 706 2 HOH HOH . I 5 HOH A 271 707 3 HOH HOH . I 5 HOH A 272 708 13 HOH HOH . I 5 HOH A 273 709 14 HOH HOH . I 5 HOH A 274 710 20 HOH HOH . I 5 HOH A 275 711 21 HOH HOH . I 5 HOH A 276 712 23 HOH HOH . I 5 HOH A 277 713 24 HOH HOH . I 5 HOH A 278 714 29 HOH HOH . I 5 HOH A 279 715 30 HOH HOH . I 5 HOH A 280 716 31 HOH HOH . I 5 HOH A 281 717 32 HOH HOH . I 5 HOH A 282 718 33 HOH HOH . I 5 HOH A 283 719 35 HOH HOH . I 5 HOH A 284 720 36 HOH HOH . I 5 HOH A 285 721 37 HOH HOH . I 5 HOH A 286 722 38 HOH HOH . I 5 HOH A 287 723 40 HOH HOH . I 5 HOH A 288 724 42 HOH HOH . I 5 HOH A 289 725 49 HOH HOH . I 5 HOH A 290 726 50 HOH HOH . I 5 HOH A 291 727 54 HOH HOH . I 5 HOH A 292 728 63 HOH HOH . I 5 HOH A 293 729 69 HOH HOH . I 5 HOH A 294 730 75 HOH HOH . I 5 HOH A 295 731 93 HOH HOH . I 5 HOH A 296 732 99 HOH HOH . I 5 HOH A 297 733 104 HOH HOH . I 5 HOH A 298 734 110 HOH HOH . I 5 HOH A 299 735 125 HOH HOH . I 5 HOH A 300 736 127 HOH HOH . I 5 HOH A 301 737 132 HOH HOH . I 5 HOH A 302 738 137 HOH HOH . I 5 HOH A 303 739 153 HOH HOH . I 5 HOH A 304 740 300 HOH HOH . I 5 HOH A 305 741 332 HOH HOH . I 5 HOH A 306 742 333 HOH HOH . I 5 HOH A 307 743 334 HOH HOH . I 5 HOH A 308 744 340 HOH HOH . I 5 HOH A 309 745 343 HOH HOH . I 5 HOH A 310 746 344 HOH HOH . I 5 HOH A 311 747 348 HOH HOH . I 5 HOH A 312 748 365 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 3 2.496 41.973 26.179 1 47.16 ? C1 GOL 435 A 1 HETATM 2 O O1 GOL . . . H 3 1.112 41.944 26.167 1 43.28 ? O1 GOL 435 A 1 HETATM 3 C C2 GOL . . . H 3 3.112 41.227 27.363 1 47.29 ? C2 GOL 435 A 1 HETATM 4 O O2 GOL . . . H 3 4.374 40.899 26.875 1 50.35 ? O2 GOL 435 A 1 HETATM 5 C C3 GOL . . . H 3 3.296 42.097 28.616 1 48.37 ? C3 GOL 435 A 1 HETATM 6 O O3 GOL . . . H 3 2.184 42.029 29.51 1 44.66 ? O3 GOL 435 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 6 #