data_3NU9
#
_model_server_result.job_id            paLeCF_7wpAjgHJ54JzrxA 
_model_server_result.datetime_utc      '2024-11-08 06:36:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3nu9 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"X","auth_seq_id":506}' 
#
_entry.id    3NU9 
#
_exptl.entry_id    3NU9 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              126.904 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IODIDE ION' 
_entity.pdbx_number_of_molecules    30 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3NU9 
_cell.length_a            59.513 
_cell.length_b            86.881 
_cell.length_c            45.448 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 3NU9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
? 3 AA N N 
? 3 BA N N 
? 3 CA N N 
? 3 DA N N 
? 3 EA N N 
? 3 FA N N 
? 3 GA N N 
#
_chem_comp.formula           'I -1' 
_chem_comp.formula_weight    126.904 
_chem_comp.id                IOD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IODIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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_atom_sites.entry_id                     3NU9 
_atom_sites.fract_transf_matrix[1][1]    0.016803 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01151 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022003 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 478 A 1 401 401 478 478 . 
D 3 IOD A 1 502 502 IOD IOD . 
E 3 IOD A 1 507 507 IOD IOD . 
F 3 IOD A 1 509 509 IOD IOD . 
G 3 IOD A 1 510 510 IOD IOD . 
H 3 IOD A 1 511 511 IOD IOD . 
I 3 IOD A 1 512 512 IOD IOD . 
J 3 IOD A 1 514 514 IOD IOD . 
K 3 IOD A 1 517 517 IOD IOD . 
L 3 IOD A 1 522 522 IOD IOD . 
M 3 IOD A 1 523 523 IOD IOD . 
N 3 IOD A 1 524 524 IOD IOD . 
O 3 IOD A 1 526 526 IOD IOD . 
P 3 IOD A 1 528 528 IOD IOD . 
Q 3 IOD A 1 529 529 IOD IOD . 
R 3 IOD A 1 532 532 IOD IOD . 
S 3 IOD A 1 533 533 IOD IOD . 
T 3 IOD B 1 501 501 IOD IOD . 
U 3 IOD B 1 503 503 IOD IOD . 
V 3 IOD B 1 504 504 IOD IOD . 
W 3 IOD B 1 505 505 IOD IOD . 
X 3 IOD B 1 506 506 IOD IOD . 
Y 3 IOD B 1 508 508 IOD IOD . 
Z 3 IOD B 1 513 513 IOD IOD . 
AA 3 IOD B 1 515 515 IOD IOD . 
BA 3 IOD B 1 516 516 IOD IOD . 
CA 3 IOD B 1 519 519 IOD IOD . 
DA 3 IOD B 1 525 525 IOD IOD . 
EA 3 IOD B 1 527 527 IOD IOD . 
FA 3 IOD B 1 530 530 IOD IOD . 
GA 3 IOD B 1 531 531 IOD IOD . 
HA 4 HOH A 1 1008 1008 HOH HOH . 
HA 4 HOH A 2 1011 1011 HOH HOH . 
HA 4 HOH A 3 1012 1012 HOH HOH . 
HA 4 HOH A 4 1013 1013 HOH HOH . 
HA 4 HOH A 5 1025 1025 HOH HOH . 
HA 4 HOH A 6 1027 1027 HOH HOH . 
HA 4 HOH A 7 1032 1032 HOH HOH . 
HA 4 HOH A 8 1034 1034 HOH HOH . 
HA 4 HOH A 9 1035 1035 HOH HOH . 
HA 4 HOH A 10 1039 1039 HOH HOH . 
HA 4 HOH A 11 1040 1040 HOH HOH . 
HA 4 HOH A 12 1041 1041 HOH HOH . 
HA 4 HOH A 13 1042 1042 HOH HOH . 
HA 4 HOH A 14 1043 1043 HOH HOH . 
HA 4 HOH A 15 1045 1045 HOH HOH . 
HA 4 HOH A 16 1046 1046 HOH HOH . 
HA 4 HOH A 17 1047 1047 HOH HOH . 
HA 4 HOH A 18 1053 1053 HOH HOH . 
HA 4 HOH A 19 1056 1056 HOH HOH . 
HA 4 HOH A 20 1066 1066 HOH HOH . 
HA 4 HOH A 21 1068 1068 HOH HOH . 
HA 4 HOH A 22 1069 1069 HOH HOH . 
HA 4 HOH A 23 1079 1079 HOH HOH . 
HA 4 HOH A 24 1082 1082 HOH HOH . 
HA 4 HOH A 25 1091 1091 HOH HOH . 
HA 4 HOH A 26 1092 1092 HOH HOH . 
HA 4 HOH A 27 1093 1093 HOH HOH . 
HA 4 HOH A 28 1094 1094 HOH HOH . 
HA 4 HOH A 29 1097 1097 HOH HOH . 
HA 4 HOH A 30 1101 1101 HOH HOH . 
HA 4 HOH A 31 1102 1102 HOH HOH . 
HA 4 HOH A 32 1115 1115 HOH HOH . 
HA 4 HOH A 33 1116 1116 HOH HOH . 
HA 4 HOH A 34 1117 1117 HOH HOH . 
HA 4 HOH A 35 1119 1119 HOH HOH . 
HA 4 HOH A 36 1121 1121 HOH HOH . 
HA 4 HOH A 37 1122 1122 HOH HOH . 
IA 4 HOH B 1 1001 1001 HOH HOH . 
IA 4 HOH B 2 1002 1002 HOH HOH . 
IA 4 HOH B 3 1006 1006 HOH HOH . 
IA 4 HOH B 4 1009 1009 HOH HOH . 
IA 4 HOH B 5 1015 1015 HOH HOH . 
IA 4 HOH B 6 1016 1016 HOH HOH . 
IA 4 HOH B 7 1017 1017 HOH HOH . 
IA 4 HOH B 8 1018 1018 HOH HOH . 
IA 4 HOH B 9 1019 1019 HOH HOH . 
IA 4 HOH B 10 1021 1021 HOH HOH . 
IA 4 HOH B 11 1022 1022 HOH HOH . 
IA 4 HOH B 12 1023 1023 HOH HOH . 
IA 4 HOH B 13 1024 1024 HOH HOH . 
IA 4 HOH B 14 1026 1026 HOH HOH . 
IA 4 HOH B 15 1028 1028 HOH HOH . 
IA 4 HOH B 16 1029 1029 HOH HOH . 
IA 4 HOH B 17 1030 1030 HOH HOH . 
IA 4 HOH B 18 1031 1031 HOH HOH . 
IA 4 HOH B 19 1036 1036 HOH HOH . 
IA 4 HOH B 20 1037 1037 HOH HOH . 
IA 4 HOH B 21 1038 1038 HOH HOH . 
IA 4 HOH B 22 1048 1048 HOH HOH . 
IA 4 HOH B 23 1049 1049 HOH HOH . 
IA 4 HOH B 24 1054 1054 HOH HOH . 
IA 4 HOH B 25 1055 1055 HOH HOH . 
IA 4 HOH B 26 1059 1059 HOH HOH . 
IA 4 HOH B 27 1060 1060 HOH HOH . 
IA 4 HOH B 28 1062 1062 HOH HOH . 
IA 4 HOH B 29 1065 1065 HOH HOH . 
IA 4 HOH B 30 1067 1067 HOH HOH . 
IA 4 HOH B 31 1070 1070 HOH HOH . 
IA 4 HOH B 32 1071 1071 HOH HOH . 
IA 4 HOH B 33 1072 1072 HOH HOH . 
IA 4 HOH B 34 1073 1073 HOH HOH . 
IA 4 HOH B 35 1075 1075 HOH HOH . 
IA 4 HOH B 36 1077 1077 HOH HOH . 
IA 4 HOH B 37 1078 1078 HOH HOH . 
IA 4 HOH B 38 1090 1090 HOH HOH . 
IA 4 HOH B 39 1104 1104 HOH HOH . 
IA 4 HOH B 40 1107 1107 HOH HOH . 
IA 4 HOH B 41 1114 1114 HOH HOH . 
IA 4 HOH B 42 1120 1120 HOH HOH . 
IA 4 HOH B 43 1124 1124 HOH HOH . 
IA 4 HOH B 44 1126 1126 HOH HOH . 
IA 4 HOH B 45 1127 1127 HOH HOH . 
IA 4 HOH B 46 1132 1132 HOH HOH . 
IA 4 HOH B 47 1133 1133 HOH HOH . 
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_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           I 
_atom_site.label_atom_id         I 
_atom_site.label_comp_id         IOD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         X 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               5.824 
_atom_site.Cartn_y               21.246 
_atom_site.Cartn_z               33.052 
_atom_site.occupancy             0.5 
_atom_site.B_iso_or_equiv        32.96 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          I 
_atom_site.auth_comp_id          IOD 
_atom_site.auth_seq_id           506 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
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_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#