data_3NUK # _model_server_result.job_id baA8dtvGKvVcBUHpOZqaFQ _model_server_result.datetime_utc '2024-11-19 16:49:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nuk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":664}' # _entry.id 3NUK # _exptl.entry_id 3NUK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.82 _cell.angle_gamma 90 _cell.entry_id 3NUK _cell.length_a 68.798 _cell.length_b 125.531 _cell.length_c 88.296 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NUK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3NUK _atom_sites.fract_transf_matrix[1][1] 0.014535 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004672 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007966 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011896 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 664 664 GOL GOL . D 3 HOH A 1 666 666 HOH HOH . D 3 HOH A 2 667 667 HOH HOH . D 3 HOH A 3 668 668 HOH HOH . D 3 HOH A 4 669 669 HOH HOH . D 3 HOH A 5 670 670 HOH HOH . D 3 HOH A 6 671 671 HOH HOH . D 3 HOH A 7 672 672 HOH HOH . D 3 HOH A 8 673 673 HOH HOH . D 3 HOH A 9 674 674 HOH HOH . D 3 HOH A 10 675 675 HOH HOH . D 3 HOH A 11 676 676 HOH HOH . D 3 HOH A 12 677 677 HOH HOH . D 3 HOH A 13 678 678 HOH HOH . D 3 HOH A 14 679 679 HOH HOH . D 3 HOH A 15 680 680 HOH HOH . D 3 HOH A 16 681 681 HOH HOH . D 3 HOH A 17 682 682 HOH HOH . D 3 HOH A 18 683 683 HOH HOH . D 3 HOH A 19 684 684 HOH HOH . D 3 HOH A 20 685 685 HOH HOH . D 3 HOH A 21 686 686 HOH HOH . D 3 HOH A 22 687 687 HOH HOH . D 3 HOH A 23 688 688 HOH HOH . D 3 HOH A 24 689 689 HOH HOH . D 3 HOH A 25 690 690 HOH HOH . D 3 HOH A 26 691 691 HOH HOH . D 3 HOH A 27 692 692 HOH HOH . D 3 HOH A 28 693 693 HOH HOH . D 3 HOH A 29 694 694 HOH HOH . D 3 HOH A 30 695 695 HOH HOH . D 3 HOH A 31 696 696 HOH HOH . D 3 HOH A 32 697 697 HOH HOH . D 3 HOH A 33 698 698 HOH HOH . D 3 HOH A 34 699 699 HOH HOH . D 3 HOH A 35 700 700 HOH HOH . D 3 HOH A 36 701 701 HOH HOH . D 3 HOH A 37 702 702 HOH HOH . D 3 HOH A 38 703 703 HOH HOH . D 3 HOH A 39 704 704 HOH HOH . D 3 HOH A 40 705 705 HOH HOH . D 3 HOH A 41 706 706 HOH HOH . D 3 HOH A 42 707 707 HOH HOH . D 3 HOH A 43 708 708 HOH HOH . D 3 HOH A 44 709 709 HOH HOH . D 3 HOH A 45 710 710 HOH HOH . D 3 HOH A 46 711 711 HOH HOH . D 3 HOH A 47 712 712 HOH HOH . D 3 HOH A 48 713 713 HOH HOH . D 3 HOH A 49 714 714 HOH HOH . D 3 HOH A 50 715 715 HOH HOH . D 3 HOH A 51 716 716 HOH HOH . D 3 HOH A 52 717 717 HOH HOH . D 3 HOH A 53 718 718 HOH HOH . D 3 HOH A 54 719 719 HOH HOH . D 3 HOH A 55 720 720 HOH HOH . D 3 HOH A 56 721 721 HOH HOH . D 3 HOH A 57 722 722 HOH HOH . D 3 HOH A 58 723 723 HOH HOH . D 3 HOH A 59 724 724 HOH HOH . D 3 HOH A 60 725 725 HOH HOH . D 3 HOH A 61 726 726 HOH HOH . D 3 HOH A 62 727 727 HOH HOH . D 3 HOH A 63 728 728 HOH HOH . D 3 HOH A 64 729 729 HOH HOH . D 3 HOH A 65 730 730 HOH HOH . D 3 HOH A 66 731 731 HOH HOH . D 3 HOH A 67 732 732 HOH HOH . D 3 HOH A 68 733 733 HOH HOH . D 3 HOH A 69 734 734 HOH HOH . D 3 HOH A 70 735 735 HOH HOH . D 3 HOH A 71 736 736 HOH HOH . D 3 HOH A 72 737 737 HOH HOH . D 3 HOH A 73 738 738 HOH HOH . D 3 HOH A 74 739 739 HOH HOH . D 3 HOH A 75 740 740 HOH HOH . D 3 HOH A 76 741 741 HOH HOH . D 3 HOH A 77 742 742 HOH HOH . D 3 HOH A 78 743 743 HOH HOH . D 3 HOH A 79 744 744 HOH HOH . D 3 HOH A 80 745 745 HOH HOH . D 3 HOH A 81 746 746 HOH HOH . D 3 HOH A 82 747 747 HOH HOH . D 3 HOH A 83 748 748 HOH HOH . D 3 HOH A 84 749 749 HOH HOH . D 3 HOH A 85 750 750 HOH HOH . D 3 HOH A 86 751 751 HOH HOH . D 3 HOH A 87 752 752 HOH HOH . D 3 HOH A 88 753 753 HOH HOH . D 3 HOH A 89 754 754 HOH HOH . D 3 HOH A 90 755 755 HOH HOH . D 3 HOH A 91 756 756 HOH HOH . D 3 HOH A 92 757 757 HOH HOH . D 3 HOH A 93 758 758 HOH HOH . D 3 HOH A 94 759 759 HOH HOH . D 3 HOH A 95 760 760 HOH HOH . D 3 HOH A 96 761 761 HOH HOH . D 3 HOH A 97 762 762 HOH HOH . D 3 HOH A 98 763 763 HOH HOH . D 3 HOH A 99 764 764 HOH HOH . D 3 HOH A 100 765 765 HOH HOH . D 3 HOH A 101 766 766 HOH HOH . D 3 HOH A 102 767 767 HOH HOH . D 3 HOH A 103 768 768 HOH HOH . D 3 HOH A 104 769 769 HOH HOH . D 3 HOH A 105 770 770 HOH HOH . D 3 HOH A 106 771 771 HOH HOH . D 3 HOH A 107 772 772 HOH HOH . D 3 HOH A 108 773 773 HOH HOH . D 3 HOH A 109 774 774 HOH HOH . D 3 HOH A 110 775 775 HOH HOH . D 3 HOH A 111 776 776 HOH HOH . D 3 HOH A 112 777 777 HOH HOH . D 3 HOH A 113 778 778 HOH HOH . D 3 HOH A 114 779 779 HOH HOH . D 3 HOH A 115 780 780 HOH HOH . D 3 HOH A 116 781 781 HOH HOH . D 3 HOH A 117 782 782 HOH HOH . D 3 HOH A 118 783 783 HOH HOH . D 3 HOH A 119 784 784 HOH HOH . D 3 HOH A 120 785 785 HOH HOH . D 3 HOH A 121 786 786 HOH HOH . D 3 HOH A 122 787 787 HOH HOH . D 3 HOH A 123 788 788 HOH HOH . D 3 HOH A 124 789 789 HOH HOH . D 3 HOH A 125 790 790 HOH HOH . D 3 HOH A 126 791 791 HOH HOH . D 3 HOH A 127 792 792 HOH HOH . D 3 HOH A 128 793 793 HOH HOH . D 3 HOH A 129 794 794 HOH HOH . D 3 HOH A 130 795 795 HOH HOH . D 3 HOH A 131 796 796 HOH HOH . D 3 HOH A 132 797 797 HOH HOH . D 3 HOH A 133 798 798 HOH HOH . D 3 HOH A 134 799 799 HOH HOH . D 3 HOH A 135 800 800 HOH HOH . D 3 HOH A 136 801 801 HOH HOH . D 3 HOH A 137 802 802 HOH HOH . D 3 HOH A 138 803 803 HOH HOH . D 3 HOH A 139 804 804 HOH HOH . D 3 HOH A 140 805 805 HOH HOH . D 3 HOH A 141 806 806 HOH HOH . D 3 HOH A 142 807 807 HOH HOH . D 3 HOH A 143 808 808 HOH HOH . D 3 HOH A 144 809 809 HOH HOH . D 3 HOH A 145 810 810 HOH HOH . D 3 HOH A 146 811 811 HOH HOH . D 3 HOH A 147 812 812 HOH HOH . D 3 HOH A 148 813 813 HOH HOH . D 3 HOH A 149 814 814 HOH HOH . D 3 HOH A 150 815 815 HOH HOH . D 3 HOH A 151 816 816 HOH HOH . D 3 HOH A 152 817 817 HOH HOH . D 3 HOH A 153 818 818 HOH HOH . D 3 HOH A 154 819 819 HOH HOH . D 3 HOH A 155 820 820 HOH HOH . D 3 HOH A 156 821 821 HOH HOH . D 3 HOH A 157 822 822 HOH HOH . D 3 HOH A 158 823 823 HOH HOH . D 3 HOH A 159 824 824 HOH HOH . D 3 HOH A 160 825 825 HOH HOH . D 3 HOH A 161 826 826 HOH HOH . D 3 HOH A 162 827 827 HOH HOH . D 3 HOH A 163 828 828 HOH HOH . D 3 HOH A 164 829 829 HOH HOH . D 3 HOH A 165 830 830 HOH HOH . D 3 HOH A 166 831 831 HOH HOH . D 3 HOH A 167 832 832 HOH HOH . D 3 HOH A 168 833 833 HOH HOH . D 3 HOH A 169 834 834 HOH HOH . D 3 HOH A 170 835 835 HOH HOH . D 3 HOH A 171 836 836 HOH HOH . D 3 HOH A 172 837 837 HOH HOH . D 3 HOH A 173 838 838 HOH HOH . D 3 HOH A 174 839 839 HOH HOH . E 3 HOH B 1 665 665 HOH HOH . E 3 HOH B 2 666 666 HOH HOH . E 3 HOH B 3 667 667 HOH HOH . E 3 HOH B 4 668 668 HOH HOH . E 3 HOH B 5 669 669 HOH HOH . E 3 HOH B 6 670 670 HOH HOH . E 3 HOH B 7 671 671 HOH HOH . E 3 HOH B 8 672 672 HOH HOH . E 3 HOH B 9 673 673 HOH HOH . E 3 HOH B 10 674 674 HOH HOH . E 3 HOH B 11 675 675 HOH HOH . E 3 HOH B 12 676 676 HOH HOH . E 3 HOH B 13 677 677 HOH HOH . E 3 HOH B 14 678 678 HOH HOH . E 3 HOH B 15 679 679 HOH HOH . E 3 HOH B 16 680 680 HOH HOH . E 3 HOH B 17 681 681 HOH HOH . E 3 HOH B 18 682 682 HOH HOH . E 3 HOH B 19 683 683 HOH HOH . E 3 HOH B 20 684 684 HOH HOH . E 3 HOH B 21 685 685 HOH HOH . E 3 HOH B 22 686 686 HOH HOH . E 3 HOH B 23 687 687 HOH HOH . E 3 HOH B 24 688 688 HOH HOH . E 3 HOH B 25 689 689 HOH HOH . E 3 HOH B 26 690 690 HOH HOH . E 3 HOH B 27 691 691 HOH HOH . E 3 HOH B 28 692 692 HOH HOH . E 3 HOH B 29 693 693 HOH HOH . E 3 HOH B 30 694 694 HOH HOH . E 3 HOH B 31 695 695 HOH HOH . E 3 HOH B 32 696 696 HOH HOH . E 3 HOH B 33 697 697 HOH HOH . E 3 HOH B 34 698 698 HOH HOH . E 3 HOH B 35 699 699 HOH HOH . E 3 HOH B 36 700 700 HOH HOH . E 3 HOH B 37 701 701 HOH HOH . E 3 HOH B 38 702 702 HOH HOH . E 3 HOH B 39 703 703 HOH HOH . E 3 HOH B 40 704 704 HOH HOH . E 3 HOH B 41 705 705 HOH HOH . E 3 HOH B 42 706 706 HOH HOH . E 3 HOH B 43 707 707 HOH HOH . E 3 HOH B 44 708 708 HOH HOH . E 3 HOH B 45 709 709 HOH HOH . E 3 HOH B 46 710 710 HOH HOH . E 3 HOH B 47 711 711 HOH HOH . E 3 HOH B 48 712 712 HOH HOH . E 3 HOH B 49 713 713 HOH HOH . E 3 HOH B 50 714 714 HOH HOH . E 3 HOH B 51 715 715 HOH HOH . E 3 HOH B 52 716 716 HOH HOH . E 3 HOH B 53 717 717 HOH HOH . E 3 HOH B 54 718 718 HOH HOH . E 3 HOH B 55 719 719 HOH HOH . E 3 HOH B 56 720 720 HOH HOH . E 3 HOH B 57 721 721 HOH HOH . E 3 HOH B 58 722 722 HOH HOH . E 3 HOH B 59 723 723 HOH HOH . E 3 HOH B 60 724 724 HOH HOH . E 3 HOH B 61 725 725 HOH HOH . E 3 HOH B 62 726 726 HOH HOH . E 3 HOH B 63 727 727 HOH HOH . E 3 HOH B 64 728 728 HOH HOH . E 3 HOH B 65 729 729 HOH HOH . E 3 HOH B 66 730 730 HOH HOH . E 3 HOH B 67 731 731 HOH HOH . E 3 HOH B 68 732 732 HOH HOH . E 3 HOH B 69 733 733 HOH HOH . E 3 HOH B 70 734 734 HOH HOH . E 3 HOH B 71 735 735 HOH HOH . E 3 HOH B 72 736 736 HOH HOH . E 3 HOH B 73 737 737 HOH HOH . E 3 HOH B 74 738 738 HOH HOH . E 3 HOH B 75 739 739 HOH HOH . E 3 HOH B 76 740 740 HOH HOH . E 3 HOH B 77 741 741 HOH HOH . E 3 HOH B 78 742 742 HOH HOH . E 3 HOH B 79 743 743 HOH HOH . E 3 HOH B 80 744 744 HOH HOH . E 3 HOH B 81 745 745 HOH HOH . E 3 HOH B 82 746 746 HOH HOH . E 3 HOH B 83 747 747 HOH HOH . E 3 HOH B 84 748 748 HOH HOH . E 3 HOH B 85 749 749 HOH HOH . E 3 HOH B 86 750 750 HOH HOH . E 3 HOH B 87 751 751 HOH HOH . E 3 HOH B 88 752 752 HOH HOH . E 3 HOH B 89 753 753 HOH HOH . E 3 HOH B 90 754 754 HOH HOH . E 3 HOH B 91 755 755 HOH HOH . E 3 HOH B 92 756 756 HOH HOH . E 3 HOH B 93 757 757 HOH HOH . E 3 HOH B 94 758 758 HOH HOH . E 3 HOH B 95 759 759 HOH HOH . E 3 HOH B 96 760 760 HOH HOH . E 3 HOH B 97 761 761 HOH HOH . E 3 HOH B 98 762 762 HOH HOH . E 3 HOH B 99 763 763 HOH HOH . E 3 HOH B 100 764 764 HOH HOH . E 3 HOH B 101 765 765 HOH HOH . E 3 HOH B 102 766 766 HOH HOH . E 3 HOH B 103 767 767 HOH HOH . E 3 HOH B 104 768 768 HOH HOH . E 3 HOH B 105 769 769 HOH HOH . E 3 HOH B 106 770 770 HOH HOH . E 3 HOH B 107 771 771 HOH HOH . E 3 HOH B 108 772 772 HOH HOH . E 3 HOH B 109 773 773 HOH HOH . E 3 HOH B 110 774 774 HOH HOH . E 3 HOH B 111 775 775 HOH HOH . E 3 HOH B 112 776 776 HOH HOH . E 3 HOH B 113 777 777 HOH HOH . E 3 HOH B 114 778 778 HOH HOH . E 3 HOH B 115 779 779 HOH HOH . E 3 HOH B 116 780 780 HOH HOH . E 3 HOH B 117 781 781 HOH HOH . E 3 HOH B 118 782 782 HOH HOH . E 3 HOH B 119 783 783 HOH HOH . E 3 HOH B 120 784 784 HOH HOH . E 3 HOH B 121 785 785 HOH HOH . E 3 HOH B 122 786 786 HOH HOH . E 3 HOH B 123 787 787 HOH HOH . E 3 HOH B 124 788 788 HOH HOH . E 3 HOH B 125 789 789 HOH HOH . E 3 HOH B 126 790 790 HOH HOH . E 3 HOH B 127 791 791 HOH HOH . E 3 HOH B 128 792 792 HOH HOH . E 3 HOH B 129 793 793 HOH HOH . E 3 HOH B 130 794 794 HOH HOH . E 3 HOH B 131 795 795 HOH HOH . E 3 HOH B 132 796 796 HOH HOH . E 3 HOH B 133 797 797 HOH HOH . E 3 HOH B 134 798 798 HOH HOH . E 3 HOH B 135 799 799 HOH HOH . E 3 HOH B 136 800 800 HOH HOH . E 3 HOH B 137 801 801 HOH HOH . E 3 HOH B 138 802 802 HOH HOH . E 3 HOH B 139 803 803 HOH HOH . E 3 HOH B 140 804 804 HOH HOH . E 3 HOH B 141 805 805 HOH HOH . E 3 HOH B 142 806 806 HOH HOH . E 3 HOH B 143 807 807 HOH HOH . E 3 HOH B 144 808 808 HOH HOH . E 3 HOH B 145 809 809 HOH HOH . E 3 HOH B 146 810 810 HOH HOH . E 3 HOH B 147 811 811 HOH HOH . E 3 HOH B 148 812 812 HOH HOH . E 3 HOH B 149 813 813 HOH HOH . E 3 HOH B 150 814 814 HOH HOH . E 3 HOH B 151 815 815 HOH HOH . E 3 HOH B 152 816 816 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 15.102 -6.076 54.2 1 57.29 ? C1 GOL 664 A 1 HETATM 2 O O1 GOL . . . C 2 15.019 -6.474 55.56 1 48.62 ? O1 GOL 664 A 1 HETATM 3 C C2 GOL . . . C 2 13.707 -5.831 53.623 1 66.37 ? C2 GOL 664 A 1 HETATM 4 O O2 GOL . . . C 2 13.031 -4.796 54.326 1 64.3 ? O2 GOL 664 A 1 HETATM 5 C C3 GOL . . . C 2 12.925 -7.149 53.607 1 61.26 ? C3 GOL 664 A 1 HETATM 6 O O3 GOL . . . C 2 11.567 -6.926 53.285 1 63.72 ? O3 GOL 664 A 1 # _model_server_stats.io_time_ms 89 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 67 _model_server_stats.query_time_ms 495 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #