data_3NUP # _model_server_result.job_id 6VQ5YWdSUjToQDPkxFLsgg _model_server_result.datetime_utc '2024-11-26 02:29:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nup # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":900}' # _entry.id 3NUP # _exptl.entry_id 3NUP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 300.402 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[3-(1-methylethyl)-1H-pyrazol-4-yl]-N-(1-methylpiperidin-4-yl)pyrimidin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3NUP _cell.length_a 101.778 _cell.length_b 101.778 _cell.length_c 59.296 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NUP _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H24 N6' _chem_comp.formula_weight 300.402 _chem_comp.id 3NU _chem_comp.mon_nstd_flag . _chem_comp.name 4-[3-(1-methylethyl)-1H-pyrazol-4-yl]-N-(1-methylpiperidin-4-yl)pyrimidin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 4-(3-isopropyl-1H-pyrazol-4-yl)-N-(1-methylpiperidin-4-yl)pyrimidin-2-amine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 3NU doub 1 n y C5 C1 3NU sing 2 n y C1 C3 3NU sing 3 n y N1 C2 3NU sing 4 n y N2 N1 3NU sing 5 n y C2 H2 3NU sing 6 n n C3 N2 3NU doub 7 n y C8 C3 3NU sing 8 n n N3 C4 3NU doub 9 n y N3 C7 3NU sing 10 n y N5 C4 3NU sing 11 n n C4 N4 3NU sing 12 n y N4 C5 3NU doub 13 n y C5 C6 3NU sing 14 n y C11 N5 3NU sing 15 n n N5 HN5 3NU sing 16 n n C7 C6 3NU doub 17 n y C6 H6 3NU sing 18 n n C16 N6 3NU sing 19 n n C13 N6 3NU sing 20 n n C14 N6 3NU sing 21 n n C7 H7 3NU sing 22 n n C10 C8 3NU sing 23 n n C8 C9 3NU sing 24 n n C8 H8 3NU sing 25 n n C9 H9 3NU sing 26 n n C9 H9A 3NU sing 27 n n C9 H9B 3NU sing 28 n n C10 H10 3NU sing 29 n n C10 H10A 3NU sing 30 n n C10 H10B 3NU sing 31 n n C11 C12 3NU sing 32 n n C11 C15 3NU sing 33 n n C11 H11 3NU sing 34 n n C13 C12 3NU sing 35 n n C12 H12 3NU sing 36 n n C12 H12A 3NU sing 37 n n C13 H13 3NU sing 38 n n C13 H13A 3NU sing 39 n n C14 C15 3NU sing 40 n n C14 H14 3NU sing 41 n n C14 H14A 3NU sing 42 n n C15 H15 3NU sing 43 n n C15 H15A 3NU sing 44 n n C16 H16 3NU sing 45 n n C16 H16A 3NU sing 46 n n C16 H16B 3NU sing 47 n n N1 HN1 3NU sing 48 n n # _atom_sites.entry_id 3NUP _atom_sites.fract_transf_matrix[1][1] 0.009825 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009825 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016865 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3NU A 1 900 900 3NU 3NU . C 3 HOH A 1 308 1 HOH HOH . C 3 HOH A 2 309 2 HOH HOH . C 3 HOH A 3 310 3 HOH HOH . C 3 HOH A 4 311 4 HOH HOH . C 3 HOH A 5 312 5 HOH HOH . C 3 HOH A 6 313 6 HOH HOH . C 3 HOH A 7 314 7 HOH HOH . C 3 HOH A 8 315 8 HOH HOH . C 3 HOH A 9 316 9 HOH HOH . C 3 HOH A 10 317 10 HOH HOH . C 3 HOH A 11 318 11 HOH HOH . C 3 HOH A 12 319 12 HOH HOH . C 3 HOH A 13 320 13 HOH HOH . C 3 HOH A 14 321 14 HOH HOH . C 3 HOH A 15 322 15 HOH HOH . C 3 HOH A 16 323 16 HOH HOH . C 3 HOH A 17 324 17 HOH HOH . C 3 HOH A 18 325 18 HOH HOH . C 3 HOH A 19 326 19 HOH HOH . C 3 HOH A 20 327 20 HOH HOH . C 3 HOH A 21 328 21 HOH HOH . C 3 HOH A 22 329 22 HOH HOH . C 3 HOH A 23 330 23 HOH HOH . C 3 HOH A 24 331 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3NU . . . B 2 24.616 35.539 -5.623 1 59.56 ? C1 3NU 900 A 1 HETATM 2 N N1 3NU . . . B 2 24.796 36.496 -3.667 1 60.46 ? N1 3NU 900 A 1 HETATM 3 C C2 3NU . . . B 2 25.258 35.47 -4.387 1 58.93 ? C2 3NU 900 A 1 HETATM 4 N N2 3NU . . . B 2 23.885 37.256 -4.33 1 61.14 ? N2 3NU 900 A 1 HETATM 5 C C3 3NU . . . B 2 23.772 36.682 -5.513 1 59.63 ? C3 3NU 900 A 1 HETATM 6 N N3 3NU . . . B 2 25.185 32.843 -8.833 1 53.46 ? N3 3NU 900 A 1 HETATM 7 C C4 3NU . . . B 2 24.446 33.923 -8.947 1 57.09 ? C4 3NU 900 A 1 HETATM 8 N N4 3NU . . . B 2 24.228 34.831 -7.972 1 57.07 ? N4 3NU 900 A 1 HETATM 9 C C5 3NU . . . B 2 24.837 34.563 -6.752 1 57.24 ? C5 3NU 900 A 1 HETATM 10 N N5 3NU . . . B 2 23.897 34.063 -10.195 1 57.36 ? N5 3NU 900 A 1 HETATM 11 C C6 3NU . . . B 2 25.644 33.429 -6.541 1 54.32 ? C6 3NU 900 A 1 HETATM 12 N N6 3NU . . . B 2 21.077 37.077 -11.094 1 63.46 ? N6 3NU 900 A 1 HETATM 13 C C7 3NU . . . B 2 25.769 32.595 -7.65 1 50.94 ? C7 3NU 900 A 1 HETATM 14 C C8 3NU . . . B 2 22.796 37.316 -6.513 1 58.65 ? C8 3NU 900 A 1 HETATM 15 C C9 3NU . . . B 2 21.39 37.344 -5.937 1 58.87 ? C9 3NU 900 A 1 HETATM 16 C C10 3NU . . . B 2 23.212 38.738 -6.879 1 56.77 ? C10 3NU 900 A 1 HETATM 17 C C11 3NU . . . B 2 23.128 35.086 -10.907 1 58.56 ? C11 3NU 900 A 1 HETATM 18 C C12 3NU . . . B 2 21.653 34.651 -10.866 1 59.6 ? C12 3NU 900 A 1 HETATM 19 C C13 3NU . . . B 2 20.834 35.705 -11.666 1 61.29 ? C13 3NU 900 A 1 HETATM 20 C C14 3NU . . . B 2 22.481 37.477 -11.094 1 61.57 ? C14 3NU 900 A 1 HETATM 21 C C15 3NU . . . B 2 23.311 36.498 -10.284 1 61.86 ? C15 3NU 900 A 1 HETATM 22 C C16 3NU . . . B 2 20.3 38.063 -11.87 1 62.28 ? C16 3NU 900 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #