data_3NVH # _model_server_result.job_id IumGhsFItGBRMMFmb2aJWQ _model_server_result.datetime_utc '2024-12-28 22:38:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nvh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":8}' # _entry.id 3NVH # _exptl.entry_id 3NVH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 114.023 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'trifluoroacetic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3NVH _cell.length_a 30.28 _cell.length_b 4.873 _cell.length_c 31.107 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NVH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_575 x,y+2,z 1 0 0 0 1 0 0 0 1 0 9.746 0 3 'crystal symmetry operation' 1_565 x,y+1,z 1 0 0 0 1 0 0 0 1 0 4.873 0 4 'crystal symmetry operation' 1_545 x,y-1,z 1 0 0 0 1 0 0 0 1 0 -4.873 0 5 'crystal symmetry operation' 1_535 x,y-2,z 1 0 0 0 1 0 0 0 1 0 -9.746 0 6 'crystal symmetry operation' 3_574 -x,y+5/2,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 12.1825 -15.5535 7 'crystal symmetry operation' 3_564 -x,y+3/2,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 7.3095 -15.5535 8 'crystal symmetry operation' 3_554 -x,y+1/2,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 2.4365 -15.5535 9 'crystal symmetry operation' 3_544 -x,y-1/2,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 -2.4365 -15.5535 10 'crystal symmetry operation' 3_534 -x,y-3/2,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 -7.3095 -15.5535 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H F3 O2' _chem_comp.formula_weight 114.023 _chem_comp.id TFA _chem_comp.mon_nstd_flag . _chem_comp.name 'trifluoroacetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 TFA sing 127 n n C1 O TFA doub 128 n n C1 OXT TFA sing 129 n n C2 F1 TFA sing 130 n n C2 F2 TFA sing 131 n n C2 F3 TFA sing 132 n n OXT HXT TFA sing 133 n n # _atom_sites.entry_id 3NVH _atom_sites.fract_transf_matrix[1][1] 0.033025 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.205212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.032147 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TFA A 1 8 1 TFA TFA . C 3 HOH A 1 9 1 HOH HOH . C 3 HOH A 2 10 2 HOH HOH . C 3 HOH A 3 11 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TFA . . . B 2 -8.018 3.306 -1.145 1 32.54 ? C1 TFA 8 A 1 HETATM 2 C C2 TFA . . . B 2 -7.25 4.018 -2.229 1 32.66 ? C2 TFA 8 A 1 HETATM 3 O O TFA . . . B 2 -7.375 2.514 -0.427 1 31.83 ? O TFA 8 A 1 HETATM 4 F F1 TFA . . . B 2 -7.144 5.289 -1.912 1 34.61 ? F1 TFA 8 A 1 HETATM 5 F F2 TFA . . . B 2 -7.834 3.94 -3.403 1 32.35 ? F2 TFA 8 A 1 HETATM 6 F F3 TFA . . . B 2 -6.059 3.466 -2.297 1 33.17 ? F3 TFA 8 A 1 HETATM 7 O OXT TFA . . . B 2 -9.238 3.541 -0.995 1 31.63 ? OXT TFA 8 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #