data_3NW2 # _model_server_result.job_id gPjD6aUdp6RIOH_uSXWVBQ _model_server_result.datetime_utc '2025-04-04 09:17:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nw2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1}' # _entry.id 3NW2 # _exptl.entry_id 3NW2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 254.287 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[2-(4-methoxypyridin-2-yl)ethyl]-3H-imidazo[4,5-b]pyridine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3NW2 _cell.length_a 212.6 _cell.length_b 212.6 _cell.length_c 111.5 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NW2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1,2 B,G,H,I,K 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 212.6 0 55.75 3 'crystal symmetry operation' 9_766 -x+2,-x+y+1,-z+5/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 318.9 184.117001 185.833333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 33 B CYS 109 1_555 B SG CYS 33 B CYS 109 9_766 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? metalc ? metalc1 A SG CYS 118 A CYS 194 1_555 C FE HEM . A HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? metalc ? metalc2 B SG CYS 118 B CYS 194 1_555 G FE HEM . B HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? # _chem_comp.formula 'C14 H14 N4 O' _chem_comp.formula_weight 254.287 _chem_comp.id MPW _chem_comp.mon_nstd_flag . _chem_comp.name 2-[2-(4-methoxypyridin-2-yl)ethyl]-3H-imidazo[4,5-b]pyridine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C11 MPW sing 352 n n O C12 MPW sing 353 n n C1 C2 MPW doub 354 n y C1 N4 MPW sing 355 n y C1 C5 MPW sing 356 n y N1 C4 MPW sing 357 n y N1 C5 MPW doub 358 n y C2 C3 MPW sing 359 n y N2 C5 MPW sing 360 n y N2 C6 MPW sing 361 n y C3 C4 MPW doub 362 n y N3 C8 MPW doub 363 n y N3 C9 MPW sing 364 n y N4 C6 MPW doub 365 n y C6 C14 MPW sing 366 n n C7 C8 MPW sing 367 n n C7 C14 MPW sing 368 n n C8 C13 MPW sing 369 n y C9 C10 MPW doub 370 n y C10 C11 MPW sing 371 n y C11 C13 MPW doub 372 n y C2 H2 MPW sing 373 n n N2 HN2 MPW sing 374 n n C3 H3 MPW sing 375 n n C4 H4 MPW sing 376 n n C7 H7 MPW sing 377 n n C7 H7A MPW sing 378 n n C9 H9 MPW sing 379 n n C10 H10 MPW sing 380 n n C12 H12 MPW sing 381 n n C12 H12A MPW sing 382 n n C12 H12B MPW sing 383 n n C13 H13 MPW sing 384 n n C14 H14 MPW sing 385 n n C14 H14A MPW sing 386 n n # _atom_sites.entry_id 3NW2 _atom_sites.fract_transf_matrix[1][1] 0.004704 _atom_sites.fract_transf_matrix[1][2] 0.002716 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005431 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008969 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 901 901 HEM HEM . D 3 H4B A 1 902 902 H4B BH4 . E 4 SO4 A 1 907 907 SO4 SO4 . F 5 MPW A 1 1 1 MPW INH . G 2 HEM B 1 901 901 HEM HEM . H 3 H4B B 1 902 902 H4B BH4 . I 5 MPW B 1 1 1 MPW INH . J 6 HOH A 1 2 2 HOH HOH . J 6 HOH A 2 3 3 HOH HOH . J 6 HOH A 3 5 5 HOH HOH . J 6 HOH A 4 6 6 HOH HOH . J 6 HOH A 5 10 10 HOH HOH . J 6 HOH A 6 17 17 HOH HOH . J 6 HOH A 7 18 18 HOH HOH . J 6 HOH A 8 20 20 HOH HOH . J 6 HOH A 9 21 21 HOH HOH . J 6 HOH A 10 23 23 HOH HOH . J 6 HOH A 11 24 24 HOH HOH . J 6 HOH A 12 26 26 HOH HOH . J 6 HOH A 13 28 28 HOH HOH . J 6 HOH A 14 29 29 HOH HOH . J 6 HOH A 15 32 32 HOH HOH . J 6 HOH A 16 34 34 HOH HOH . J 6 HOH A 17 39 39 HOH HOH . J 6 HOH A 18 41 41 HOH HOH . J 6 HOH A 19 43 43 HOH HOH . J 6 HOH A 20 44 44 HOH HOH . J 6 HOH A 21 46 46 HOH HOH . J 6 HOH A 22 47 47 HOH HOH . J 6 HOH A 23 52 52 HOH HOH . J 6 HOH A 24 54 54 HOH HOH . J 6 HOH A 25 55 55 HOH HOH . J 6 HOH A 26 56 56 HOH HOH . J 6 HOH A 27 60 60 HOH HOH . J 6 HOH A 28 62 62 HOH HOH . J 6 HOH A 29 64 64 HOH HOH . J 6 HOH A 30 65 65 HOH HOH . J 6 HOH A 31 66 66 HOH HOH . J 6 HOH A 32 67 67 HOH HOH . J 6 HOH A 33 68 68 HOH HOH . J 6 HOH A 34 69 69 HOH HOH . J 6 HOH A 35 74 74 HOH HOH . J 6 HOH A 36 500 77 HOH HOH . J 6 HOH A 37 501 78 HOH HOH . J 6 HOH A 38 502 82 HOH HOH . J 6 HOH A 39 503 83 HOH HOH . J 6 HOH A 40 504 84 HOH HOH . K 6 HOH B 1 4 4 HOH HOH . K 6 HOH B 2 7 7 HOH HOH . K 6 HOH B 3 8 8 HOH HOH . K 6 HOH B 4 9 9 HOH HOH . K 6 HOH B 5 11 11 HOH HOH . K 6 HOH B 6 12 12 HOH HOH . K 6 HOH B 7 13 13 HOH HOH . K 6 HOH B 8 14 14 HOH HOH . K 6 HOH B 9 15 15 HOH HOH . K 6 HOH B 10 16 16 HOH HOH . K 6 HOH B 11 19 19 HOH HOH . K 6 HOH B 12 22 22 HOH HOH . K 6 HOH B 13 25 25 HOH HOH . K 6 HOH B 14 27 27 HOH HOH . K 6 HOH B 15 30 30 HOH HOH . K 6 HOH B 16 31 31 HOH HOH . K 6 HOH B 17 33 33 HOH HOH . K 6 HOH B 18 35 35 HOH HOH . K 6 HOH B 19 36 36 HOH HOH . K 6 HOH B 20 37 37 HOH HOH . K 6 HOH B 21 38 38 HOH HOH . K 6 HOH B 22 40 40 HOH HOH . K 6 HOH B 23 42 42 HOH HOH . K 6 HOH B 24 45 45 HOH HOH . K 6 HOH B 25 48 48 HOH HOH . K 6 HOH B 26 49 49 HOH HOH . K 6 HOH B 27 50 50 HOH HOH . K 6 HOH B 28 51 51 HOH HOH . K 6 HOH B 29 53 53 HOH HOH . K 6 HOH B 30 57 57 HOH HOH . K 6 HOH B 31 58 58 HOH HOH . K 6 HOH B 32 59 59 HOH HOH . K 6 HOH B 33 61 61 HOH HOH . K 6 HOH B 34 63 63 HOH HOH . K 6 HOH B 35 70 70 HOH HOH . K 6 HOH B 36 71 71 HOH HOH . K 6 HOH B 37 72 72 HOH HOH . K 6 HOH B 38 73 73 HOH HOH . K 6 HOH B 39 75 75 HOH HOH . K 6 HOH B 40 76 76 HOH HOH . K 6 HOH B 41 500 1 HOH HOH . K 6 HOH B 42 501 79 HOH HOH . K 6 HOH B 43 502 80 HOH HOH . K 6 HOH B 44 503 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O MPW . . . I 5 125.12 112.342 91.13 1 53.47 ? O MPW 1 B 1 HETATM 2 C C1 MPW . . . I 5 128.749 114.981 83.538 1 69.4 ? C1 MPW 1 B 1 HETATM 3 N N1 MPW . . . I 5 127.484 116.923 82.804 1 84.34 ? N1 MPW 1 B 1 HETATM 4 C C2 MPW . . . I 5 129.552 115.148 82.401 1 67.82 ? C2 MPW 1 B 1 HETATM 5 N N2 MPW . . . I 5 127.047 115.532 84.913 1 62.53 ? N2 MPW 1 B 1 HETATM 6 C C3 MPW . . . I 5 129.288 116.198 81.503 1 68.84 ? C3 MPW 1 B 1 HETATM 7 N N3 MPW . . . I 5 126.507 115.934 89.599 1 55.58 ? N3 MPW 1 B 1 HETATM 8 C C4 MPW . . . I 5 128.233 117.08 81.736 1 77.64 ? C4 MPW 1 B 1 HETATM 9 N N4 MPW . . . I 5 128.683 114.12 84.61 1 70.12 ? N4 MPW 1 B 1 HETATM 10 C C5 MPW . . . I 5 127.666 115.933 83.728 1 76.76 ? C5 MPW 1 B 1 HETATM 11 C C6 MPW . . . I 5 127.696 114.44 85.388 1 61.3 ? C6 MPW 1 B 1 HETATM 12 C C7 MPW . . . I 5 127.731 114.788 87.689 1 61.67 ? C7 MPW 1 B 1 HETATM 13 C C8 MPW . . . I 5 126.828 114.772 88.942 1 53.17 ? C8 MPW 1 B 1 HETATM 14 C C9 MPW . . . I 5 125.743 115.909 90.716 1 51.41 ? C9 MPW 1 B 1 HETATM 15 C C10 MPW . . . I 5 125.259 114.739 91.256 1 40.33 ? C10 MPW 1 B 1 HETATM 16 C C11 MPW . . . I 5 125.584 113.522 90.615 1 47.06 ? C11 MPW 1 B 1 HETATM 17 C C12 MPW . . . I 5 125.368 111.023 90.544 1 48.73 ? C12 MPW 1 B 1 HETATM 18 C C13 MPW . . . I 5 126.386 113.548 89.431 1 41.11 ? C13 MPW 1 B 1 HETATM 19 C C14 MPW . . . I 5 127.33 113.761 86.69 1 66.99 ? C14 MPW 1 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 19 #