data_3NWB # _model_server_result.job_id BNO2BzvDb5neCQ-wtOfaFw _model_server_result.datetime_utc '2024-11-01 10:23:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nwb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":222}' # _entry.id 3NWB # _exptl.entry_id 3NWB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3NWB _cell.length_a 50.389 _cell.length_b 55.351 _cell.length_c 79.356 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NWB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 141 A ASP 141 1_555 B MG MG . A MG 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc2 A OD2 ASP 169 A ASP 169 1_555 B MG MG . A MG 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc3 A OD1 ASN 170 A ASN 170 1_555 B MG MG . A MG 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc4 B MG MG . A MG 222 1_555 F O22 659 . A 659 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc5 B MG MG . A MG 222 1_555 F O21 659 . A 659 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc6 B MG MG . A MG 222 1_555 I O HOH . A HOH 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3NWB _atom_sites.fract_transf_matrix[1][1] 0.019846 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018067 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012601 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 222 222 MG MG . C 3 CL A 1 223 223 CL CL . D 3 CL A 1 224 224 CL CL . E 3 CL A 1 225 225 CL CL . F 4 659 A 1 226 226 659 659 . G 5 NHE A 1 227 227 NHE NHE . H 6 SO4 A 1 228 228 SO4 SO4 . I 7 HOH A 1 229 229 HOH HOH . I 7 HOH A 2 230 230 HOH HOH . I 7 HOH A 3 231 231 HOH HOH . I 7 HOH A 4 232 232 HOH HOH . I 7 HOH A 5 233 233 HOH HOH . I 7 HOH A 6 234 234 HOH HOH . I 7 HOH A 7 235 235 HOH HOH . I 7 HOH A 8 236 236 HOH HOH . I 7 HOH A 9 237 237 HOH HOH . I 7 HOH A 10 238 238 HOH HOH . I 7 HOH A 11 239 239 HOH HOH . I 7 HOH A 12 240 240 HOH HOH . I 7 HOH A 13 241 241 HOH HOH . I 7 HOH A 14 242 242 HOH HOH . I 7 HOH A 15 243 243 HOH HOH . I 7 HOH A 16 244 244 HOH HOH . I 7 HOH A 17 245 245 HOH HOH . I 7 HOH A 18 246 246 HOH HOH . I 7 HOH A 19 247 247 HOH HOH . I 7 HOH A 20 248 248 HOH HOH . I 7 HOH A 21 249 249 HOH HOH . I 7 HOH A 22 250 250 HOH HOH . I 7 HOH A 23 251 251 HOH HOH . I 7 HOH A 24 252 252 HOH HOH . I 7 HOH A 25 253 253 HOH HOH . I 7 HOH A 26 254 254 HOH HOH . I 7 HOH A 27 255 255 HOH HOH . I 7 HOH A 28 256 256 HOH HOH . I 7 HOH A 29 257 257 HOH HOH . I 7 HOH A 30 258 258 HOH HOH . I 7 HOH A 31 259 259 HOH HOH . I 7 HOH A 32 260 260 HOH HOH . I 7 HOH A 33 261 261 HOH HOH . I 7 HOH A 34 262 262 HOH HOH . I 7 HOH A 35 263 263 HOH HOH . I 7 HOH A 36 264 264 HOH HOH . I 7 HOH A 37 265 265 HOH HOH . I 7 HOH A 38 266 266 HOH HOH . I 7 HOH A 39 267 267 HOH HOH . I 7 HOH A 40 268 268 HOH HOH . I 7 HOH A 41 269 269 HOH HOH . I 7 HOH A 42 270 270 HOH HOH . I 7 HOH A 43 271 271 HOH HOH . I 7 HOH A 44 272 272 HOH HOH . I 7 HOH A 45 273 273 HOH HOH . I 7 HOH A 46 274 274 HOH HOH . I 7 HOH A 47 275 275 HOH HOH . I 7 HOH A 48 276 276 HOH HOH . I 7 HOH A 49 277 277 HOH HOH . I 7 HOH A 50 278 278 HOH HOH . I 7 HOH A 51 279 279 HOH HOH . I 7 HOH A 52 280 280 HOH HOH . I 7 HOH A 53 281 281 HOH HOH . I 7 HOH A 54 282 282 HOH HOH . I 7 HOH A 55 283 283 HOH HOH . I 7 HOH A 56 284 284 HOH HOH . I 7 HOH A 57 285 285 HOH HOH . I 7 HOH A 58 286 286 HOH HOH . I 7 HOH A 59 287 287 HOH HOH . I 7 HOH A 60 288 288 HOH HOH . I 7 HOH A 61 289 289 HOH HOH . I 7 HOH A 62 290 290 HOH HOH . I 7 HOH A 63 291 291 HOH HOH . I 7 HOH A 64 292 292 HOH HOH . I 7 HOH A 65 293 293 HOH HOH . I 7 HOH A 66 294 294 HOH HOH . I 7 HOH A 67 295 295 HOH HOH . I 7 HOH A 68 296 296 HOH HOH . I 7 HOH A 69 297 297 HOH HOH . I 7 HOH A 70 298 298 HOH HOH . I 7 HOH A 71 299 299 HOH HOH . I 7 HOH A 72 300 300 HOH HOH . I 7 HOH A 73 301 301 HOH HOH . I 7 HOH A 74 302 302 HOH HOH . I 7 HOH A 75 303 303 HOH HOH . I 7 HOH A 76 304 304 HOH HOH . I 7 HOH A 77 305 305 HOH HOH . I 7 HOH A 78 306 306 HOH HOH . I 7 HOH A 79 307 307 HOH HOH . I 7 HOH A 80 308 308 HOH HOH . I 7 HOH A 81 309 309 HOH HOH . I 7 HOH A 82 310 310 HOH HOH . I 7 HOH A 83 311 311 HOH HOH . I 7 HOH A 84 312 312 HOH HOH . I 7 HOH A 85 313 313 HOH HOH . I 7 HOH A 86 314 314 HOH HOH . I 7 HOH A 87 315 315 HOH HOH . I 7 HOH A 88 316 316 HOH HOH . I 7 HOH A 89 317 317 HOH HOH . I 7 HOH A 90 318 318 HOH HOH . I 7 HOH A 91 319 319 HOH HOH . I 7 HOH A 92 320 320 HOH HOH . I 7 HOH A 93 321 321 HOH HOH . I 7 HOH A 94 322 322 HOH HOH . I 7 HOH A 95 323 323 HOH HOH . I 7 HOH A 96 324 324 HOH HOH . I 7 HOH A 97 325 325 HOH HOH . I 7 HOH A 98 326 326 HOH HOH . I 7 HOH A 99 327 327 HOH HOH . I 7 HOH A 100 328 328 HOH HOH . I 7 HOH A 101 329 329 HOH HOH . I 7 HOH A 102 330 330 HOH HOH . I 7 HOH A 103 331 331 HOH HOH . I 7 HOH A 104 332 332 HOH HOH . I 7 HOH A 105 333 333 HOH HOH . I 7 HOH A 106 334 334 HOH HOH . I 7 HOH A 107 335 335 HOH HOH . I 7 HOH A 108 336 336 HOH HOH . I 7 HOH A 109 337 337 HOH HOH . I 7 HOH A 110 338 338 HOH HOH . I 7 HOH A 111 339 339 HOH HOH . I 7 HOH A 112 340 340 HOH HOH . I 7 HOH A 113 341 341 HOH HOH . I 7 HOH A 114 342 342 HOH HOH . I 7 HOH A 115 343 343 HOH HOH . I 7 HOH A 116 344 344 HOH HOH . I 7 HOH A 117 345 345 HOH HOH . I 7 HOH A 118 346 346 HOH HOH . I 7 HOH A 119 347 347 HOH HOH . I 7 HOH A 120 348 348 HOH HOH . I 7 HOH A 121 349 349 HOH HOH . I 7 HOH A 122 350 350 HOH HOH . I 7 HOH A 123 351 351 HOH HOH . I 7 HOH A 124 352 352 HOH HOH . I 7 HOH A 125 353 353 HOH HOH . I 7 HOH A 126 354 354 HOH HOH . I 7 HOH A 127 355 355 HOH HOH . I 7 HOH A 128 356 356 HOH HOH . I 7 HOH A 129 357 357 HOH HOH . I 7 HOH A 130 358 358 HOH HOH . I 7 HOH A 131 359 359 HOH HOH . I 7 HOH A 132 360 360 HOH HOH . I 7 HOH A 133 361 361 HOH HOH . I 7 HOH A 134 362 362 HOH HOH . I 7 HOH A 135 363 363 HOH HOH . I 7 HOH A 136 364 364 HOH HOH . I 7 HOH A 137 365 365 HOH HOH . I 7 HOH A 138 366 366 HOH HOH . I 7 HOH A 139 367 367 HOH HOH . I 7 HOH A 140 368 368 HOH HOH . I 7 HOH A 141 369 369 HOH HOH . I 7 HOH A 142 370 370 HOH HOH . I 7 HOH A 143 371 371 HOH HOH . I 7 HOH A 144 372 372 HOH HOH . I 7 HOH A 145 373 373 HOH HOH . I 7 HOH A 146 374 374 HOH HOH . I 7 HOH A 147 375 375 HOH HOH . I 7 HOH A 148 376 376 HOH HOH . I 7 HOH A 149 377 377 HOH HOH . I 7 HOH A 150 378 378 HOH HOH . I 7 HOH A 151 379 379 HOH HOH . I 7 HOH A 152 380 380 HOH HOH . I 7 HOH A 153 381 381 HOH HOH . I 7 HOH A 154 382 382 HOH HOH . I 7 HOH A 155 383 383 HOH HOH . I 7 HOH A 156 384 384 HOH HOH . I 7 HOH A 157 385 385 HOH HOH . I 7 HOH A 158 386 386 HOH HOH . I 7 HOH A 159 387 387 HOH HOH . I 7 HOH A 160 388 388 HOH HOH . I 7 HOH A 161 389 389 HOH HOH . I 7 HOH A 162 390 390 HOH HOH . I 7 HOH A 163 391 391 HOH HOH . I 7 HOH A 164 392 392 HOH HOH . I 7 HOH A 165 393 393 HOH HOH . I 7 HOH A 166 394 394 HOH HOH . I 7 HOH A 167 395 395 HOH HOH . I 7 HOH A 168 396 396 HOH HOH . I 7 HOH A 169 397 397 HOH HOH . I 7 HOH A 170 398 398 HOH HOH . I 7 HOH A 171 399 399 HOH HOH . I 7 HOH A 172 400 400 HOH HOH . I 7 HOH A 173 401 401 HOH HOH . I 7 HOH A 174 402 402 HOH HOH . I 7 HOH A 175 403 403 HOH HOH . I 7 HOH A 176 404 404 HOH HOH . I 7 HOH A 177 405 405 HOH HOH . I 7 HOH A 178 406 406 HOH HOH . I 7 HOH A 179 407 407 HOH HOH . I 7 HOH A 180 408 408 HOH HOH . I 7 HOH A 181 409 409 HOH HOH . I 7 HOH A 182 410 410 HOH HOH . I 7 HOH A 183 411 411 HOH HOH . I 7 HOH A 184 412 412 HOH HOH . I 7 HOH A 185 413 413 HOH HOH . I 7 HOH A 186 414 414 HOH HOH . I 7 HOH A 187 415 415 HOH HOH . I 7 HOH A 188 416 416 HOH HOH . I 7 HOH A 189 417 417 HOH HOH . I 7 HOH A 190 418 418 HOH HOH . I 7 HOH A 191 419 419 HOH HOH . I 7 HOH A 192 420 420 HOH HOH . I 7 HOH A 193 421 421 HOH HOH . I 7 HOH A 194 422 422 HOH HOH . I 7 HOH A 195 423 423 HOH HOH . I 7 HOH A 196 424 424 HOH HOH . I 7 HOH A 197 425 425 HOH HOH . I 7 HOH A 198 426 426 HOH HOH . I 7 HOH A 199 427 427 HOH HOH . I 7 HOH A 200 428 428 HOH HOH . I 7 HOH A 201 429 429 HOH HOH . I 7 HOH A 202 430 430 HOH HOH . I 7 HOH A 203 431 431 HOH HOH . I 7 HOH A 204 432 432 HOH HOH . I 7 HOH A 205 433 433 HOH HOH . I 7 HOH A 206 434 434 HOH HOH . I 7 HOH A 207 435 435 HOH HOH . I 7 HOH A 208 436 436 HOH HOH . I 7 HOH A 209 437 437 HOH HOH . I 7 HOH A 210 438 438 HOH HOH . I 7 HOH A 211 439 439 HOH HOH . I 7 HOH A 212 440 440 HOH HOH . I 7 HOH A 213 441 441 HOH HOH . I 7 HOH A 214 442 442 HOH HOH . I 7 HOH A 215 443 443 HOH HOH . I 7 HOH A 216 444 444 HOH HOH . I 7 HOH A 217 445 445 HOH HOH . I 7 HOH A 218 446 446 HOH HOH . I 7 HOH A 219 447 447 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 2.679 _atom_site.Cartn_y 15.913 _atom_site.Cartn_z 12.232 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 11.22 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 222 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #