data_3NWW # _model_server_result.job_id JCgV4chqZ0CgwTxfbfhYgQ _model_server_result.datetime_utc '2024-12-28 14:55:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nww # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":361}' # _entry.id 3NWW # _exptl.entry_id 3NWW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.645 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[2-(2-{[2-(dimethylamino)ethyl]amino}-6-{2-[(1-methylethyl)amino]-1,3-thiazol-5-yl}pyrimidin-4-yl)benzyl]-3-ethylurea _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3NWW _cell.length_a 66.155 _cell.length_b 75.055 _cell.length_c 78.628 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NWW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H34 N8 O S' _chem_comp.formula_weight 482.645 _chem_comp.id 3NW _chem_comp.mon_nstd_flag . _chem_comp.name 1-[2-(2-{[2-(dimethylamino)ethyl]amino}-6-{2-[(1-methylethyl)amino]-1,3-thiazol-5-yl}pyrimidin-4-yl)benzyl]-3-ethylurea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C1 3NW doub 1 n y C1 C2 3NW sing 2 n y C1 H1 3NW sing 3 n n C2 N3 3NW doub 4 n y C2 C7 3NW sing 5 n y C4 N3 3NW sing 6 n y N5 C4 3NW doub 7 n y C4 N16 3NW sing 8 n n C6 N5 3NW sing 9 n y C18 C6 3NW sing 10 n y C8 C7 3NW doub 11 n y C7 S11 3NW sing 12 n y C8 N9 3NW sing 13 n y C8 H8 3NW sing 14 n n N9 C10 3NW doub 15 n y S11 C10 3NW sing 16 n y C10 N12 3NW sing 17 n n N12 C13 3NW sing 18 n n N12 HN12 3NW sing 19 n n C14 C13 3NW sing 20 n n C13 C15 3NW sing 21 n n C13 H13 3NW sing 22 n n C14 H14 3NW sing 23 n n C14 H14A 3NW sing 24 n n C14 H14B 3NW sing 25 n n C15 H15 3NW sing 26 n n C15 H15A 3NW sing 27 n n C15 H15B 3NW sing 28 n n N16 C27 3NW sing 29 n n N16 HN16 3NW sing 30 n n C17 C20 3NW doub 31 n y C17 C21 3NW sing 32 n y C17 H17 3NW sing 33 n n C19 C18 3NW doub 34 n y C22 C18 3NW sing 35 n y C20 C19 3NW sing 36 n y C23 C19 3NW sing 37 n n C20 H20 3NW sing 38 n n C21 C22 3NW doub 39 n y C21 H21 3NW sing 40 n n C22 H22 3NW sing 41 n n N29 C23 3NW sing 42 n n C23 H23 3NW sing 43 n n C23 H23A 3NW sing 44 n n N25 C24 3NW sing 45 n n C24 H24 3NW sing 46 n n C24 H24A 3NW sing 47 n n C24 H24B 3NW sing 48 n n C28 N25 3NW sing 49 n n N25 C26 3NW sing 50 n n C27 C26 3NW sing 51 n n C26 H26 3NW sing 52 n n C26 H26A 3NW sing 53 n n C27 H27 3NW sing 54 n n C27 H27A 3NW sing 55 n n C28 H28 3NW sing 56 n n C28 H28A 3NW sing 57 n n C28 H28B 3NW sing 58 n n C30 N29 3NW sing 59 n n N29 HN29 3NW sing 60 n n N31 C30 3NW sing 61 n n C30 O32 3NW doub 62 n n C33 N31 3NW sing 63 n n N31 HN31 3NW sing 64 n n C34 C33 3NW sing 65 n n C33 H33 3NW sing 66 n n C33 H33A 3NW sing 67 n n C34 H34 3NW sing 68 n n C34 H34A 3NW sing 69 n n C34 H34B 3NW sing 70 n n # _atom_sites.entry_id 3NWW _atom_sites.fract_transf_matrix[1][1] 0.015116 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013324 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012718 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3NW A 1 361 1 3NW 3NW . C 3 HOH A 1 362 1 HOH HOH . C 3 HOH A 2 363 2 HOH HOH . C 3 HOH A 3 364 3 HOH HOH . C 3 HOH A 4 365 4 HOH HOH . C 3 HOH A 5 366 5 HOH HOH . C 3 HOH A 6 367 6 HOH HOH . C 3 HOH A 7 368 7 HOH HOH . C 3 HOH A 8 369 8 HOH HOH . C 3 HOH A 9 370 9 HOH HOH . C 3 HOH A 10 371 10 HOH HOH . C 3 HOH A 11 372 11 HOH HOH . C 3 HOH A 12 373 12 HOH HOH . C 3 HOH A 13 374 13 HOH HOH . C 3 HOH A 14 375 14 HOH HOH . C 3 HOH A 15 376 15 HOH HOH . C 3 HOH A 16 377 16 HOH HOH . C 3 HOH A 17 378 17 HOH HOH . C 3 HOH A 18 379 18 HOH HOH . C 3 HOH A 19 380 19 HOH HOH . C 3 HOH A 20 381 20 HOH HOH . C 3 HOH A 21 382 21 HOH HOH . C 3 HOH A 22 383 22 HOH HOH . C 3 HOH A 23 384 23 HOH HOH . C 3 HOH A 24 385 24 HOH HOH . C 3 HOH A 25 386 25 HOH HOH . C 3 HOH A 26 387 26 HOH HOH . C 3 HOH A 27 388 27 HOH HOH . C 3 HOH A 28 389 28 HOH HOH . C 3 HOH A 29 390 29 HOH HOH . C 3 HOH A 30 391 30 HOH HOH . C 3 HOH A 31 392 31 HOH HOH . C 3 HOH A 32 393 32 HOH HOH . C 3 HOH A 33 394 33 HOH HOH . C 3 HOH A 34 395 34 HOH HOH . C 3 HOH A 35 396 35 HOH HOH . C 3 HOH A 36 397 36 HOH HOH . C 3 HOH A 37 398 37 HOH HOH . C 3 HOH A 38 399 38 HOH HOH . C 3 HOH A 39 400 39 HOH HOH . C 3 HOH A 40 401 40 HOH HOH . C 3 HOH A 41 402 41 HOH HOH . C 3 HOH A 42 403 42 HOH HOH . C 3 HOH A 43 404 43 HOH HOH . C 3 HOH A 44 405 44 HOH HOH . C 3 HOH A 45 406 45 HOH HOH . C 3 HOH A 46 407 46 HOH HOH . C 3 HOH A 47 408 47 HOH HOH . C 3 HOH A 48 409 48 HOH HOH . C 3 HOH A 49 410 49 HOH HOH . C 3 HOH A 50 411 50 HOH HOH . C 3 HOH A 51 412 51 HOH HOH . C 3 HOH A 52 413 52 HOH HOH . C 3 HOH A 53 414 53 HOH HOH . C 3 HOH A 54 415 54 HOH HOH . C 3 HOH A 55 416 55 HOH HOH . C 3 HOH A 56 417 56 HOH HOH . C 3 HOH A 57 418 57 HOH HOH . C 3 HOH A 58 419 58 HOH HOH . C 3 HOH A 59 420 59 HOH HOH . C 3 HOH A 60 421 60 HOH HOH . C 3 HOH A 61 422 61 HOH HOH . C 3 HOH A 62 423 62 HOH HOH . C 3 HOH A 63 424 63 HOH HOH . C 3 HOH A 64 425 64 HOH HOH . C 3 HOH A 65 426 65 HOH HOH . C 3 HOH A 66 427 66 HOH HOH . C 3 HOH A 67 428 67 HOH HOH . C 3 HOH A 68 429 68 HOH HOH . C 3 HOH A 69 430 69 HOH HOH . C 3 HOH A 70 431 70 HOH HOH . C 3 HOH A 71 432 71 HOH HOH . C 3 HOH A 72 433 72 HOH HOH . C 3 HOH A 73 434 73 HOH HOH . C 3 HOH A 74 435 74 HOH HOH . C 3 HOH A 75 436 75 HOH HOH . C 3 HOH A 76 437 76 HOH HOH . C 3 HOH A 77 438 77 HOH HOH . C 3 HOH A 78 439 78 HOH HOH . C 3 HOH A 79 440 79 HOH HOH . C 3 HOH A 80 441 80 HOH HOH . C 3 HOH A 81 442 81 HOH HOH . C 3 HOH A 82 443 82 HOH HOH . C 3 HOH A 83 444 83 HOH HOH . C 3 HOH A 84 445 84 HOH HOH . C 3 HOH A 85 446 85 HOH HOH . C 3 HOH A 86 447 86 HOH HOH . C 3 HOH A 87 448 87 HOH HOH . C 3 HOH A 88 449 88 HOH HOH . C 3 HOH A 89 450 89 HOH HOH . C 3 HOH A 90 451 90 HOH HOH . C 3 HOH A 91 452 91 HOH HOH . C 3 HOH A 92 453 92 HOH HOH . C 3 HOH A 93 454 93 HOH HOH . C 3 HOH A 94 455 94 HOH HOH . C 3 HOH A 95 456 95 HOH HOH . C 3 HOH A 96 457 96 HOH HOH . C 3 HOH A 97 458 97 HOH HOH . C 3 HOH A 98 459 98 HOH HOH . C 3 HOH A 99 460 99 HOH HOH . C 3 HOH A 100 461 100 HOH HOH . C 3 HOH A 101 462 101 HOH HOH . C 3 HOH A 102 463 102 HOH HOH . C 3 HOH A 103 464 103 HOH HOH . C 3 HOH A 104 465 104 HOH HOH . C 3 HOH A 105 466 105 HOH HOH . C 3 HOH A 106 467 106 HOH HOH . C 3 HOH A 107 468 107 HOH HOH . C 3 HOH A 108 469 108 HOH HOH . C 3 HOH A 109 470 109 HOH HOH . C 3 HOH A 110 471 110 HOH HOH . C 3 HOH A 111 472 111 HOH HOH . C 3 HOH A 112 473 112 HOH HOH . C 3 HOH A 113 474 113 HOH HOH . C 3 HOH A 114 475 114 HOH HOH . C 3 HOH A 115 476 115 HOH HOH . C 3 HOH A 116 477 116 HOH HOH . C 3 HOH A 117 478 117 HOH HOH . C 3 HOH A 118 479 118 HOH HOH . C 3 HOH A 119 480 119 HOH HOH . C 3 HOH A 120 481 120 HOH HOH . C 3 HOH A 121 482 121 HOH HOH . C 3 HOH A 122 483 122 HOH HOH . C 3 HOH A 123 484 123 HOH HOH . C 3 HOH A 124 485 124 HOH HOH . C 3 HOH A 125 486 125 HOH HOH . C 3 HOH A 126 487 126 HOH HOH . C 3 HOH A 127 488 127 HOH HOH . C 3 HOH A 128 489 128 HOH HOH . C 3 HOH A 129 490 129 HOH HOH . C 3 HOH A 130 491 130 HOH HOH . C 3 HOH A 131 492 131 HOH HOH . C 3 HOH A 132 493 132 HOH HOH . C 3 HOH A 133 494 133 HOH HOH . C 3 HOH A 134 495 134 HOH HOH . C 3 HOH A 135 496 135 HOH HOH . C 3 HOH A 136 497 136 HOH HOH . C 3 HOH A 137 498 137 HOH HOH . C 3 HOH A 138 499 138 HOH HOH . C 3 HOH A 139 500 139 HOH HOH . C 3 HOH A 140 501 140 HOH HOH . C 3 HOH A 141 502 141 HOH HOH . C 3 HOH A 142 503 142 HOH HOH . C 3 HOH A 143 504 143 HOH HOH . C 3 HOH A 144 505 144 HOH HOH . C 3 HOH A 145 506 145 HOH HOH . C 3 HOH A 146 507 146 HOH HOH . C 3 HOH A 147 508 147 HOH HOH . C 3 HOH A 148 509 148 HOH HOH . C 3 HOH A 149 510 149 HOH HOH . C 3 HOH A 150 511 150 HOH HOH . C 3 HOH A 151 512 151 HOH HOH . C 3 HOH A 152 513 152 HOH HOH . C 3 HOH A 153 514 153 HOH HOH . C 3 HOH A 154 515 154 HOH HOH . C 3 HOH A 155 516 155 HOH HOH . C 3 HOH A 156 517 156 HOH HOH . C 3 HOH A 157 518 157 HOH HOH . C 3 HOH A 158 519 158 HOH HOH . C 3 HOH A 159 520 159 HOH HOH . C 3 HOH A 160 521 160 HOH HOH . C 3 HOH A 161 522 161 HOH HOH . C 3 HOH A 162 523 162 HOH HOH . C 3 HOH A 163 524 163 HOH HOH . C 3 HOH A 164 525 164 HOH HOH . C 3 HOH A 165 526 165 HOH HOH . C 3 HOH A 166 527 166 HOH HOH . C 3 HOH A 167 528 167 HOH HOH . C 3 HOH A 168 529 168 HOH HOH . C 3 HOH A 169 530 169 HOH HOH . C 3 HOH A 170 531 170 HOH HOH . C 3 HOH A 171 532 171 HOH HOH . C 3 HOH A 172 533 172 HOH HOH . C 3 HOH A 173 534 173 HOH HOH . C 3 HOH A 174 535 174 HOH HOH . C 3 HOH A 175 536 175 HOH HOH . C 3 HOH A 176 537 176 HOH HOH . C 3 HOH A 177 538 177 HOH HOH . C 3 HOH A 178 539 178 HOH HOH . C 3 HOH A 179 540 179 HOH HOH . C 3 HOH A 180 541 180 HOH HOH . C 3 HOH A 181 542 181 HOH HOH . C 3 HOH A 182 543 182 HOH HOH . C 3 HOH A 183 544 183 HOH HOH . C 3 HOH A 184 545 184 HOH HOH . C 3 HOH A 185 546 185 HOH HOH . C 3 HOH A 186 547 186 HOH HOH . C 3 HOH A 187 548 187 HOH HOH . C 3 HOH A 188 549 188 HOH HOH . C 3 HOH A 189 550 189 HOH HOH . C 3 HOH A 190 551 190 HOH HOH . C 3 HOH A 191 552 191 HOH HOH . C 3 HOH A 192 553 192 HOH HOH . C 3 HOH A 193 554 193 HOH HOH . C 3 HOH A 194 555 194 HOH HOH . C 3 HOH A 195 556 195 HOH HOH . C 3 HOH A 196 557 196 HOH HOH . C 3 HOH A 197 558 197 HOH HOH . C 3 HOH A 198 559 198 HOH HOH . C 3 HOH A 199 560 199 HOH HOH . C 3 HOH A 200 561 200 HOH HOH . C 3 HOH A 201 562 201 HOH HOH . C 3 HOH A 202 563 202 HOH HOH . C 3 HOH A 203 564 203 HOH HOH . C 3 HOH A 204 565 204 HOH HOH . C 3 HOH A 205 566 205 HOH HOH . C 3 HOH A 206 567 206 HOH HOH . C 3 HOH A 207 568 207 HOH HOH . C 3 HOH A 208 569 208 HOH HOH . C 3 HOH A 209 570 209 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3NW . . . B 2 -3.561 0.922 20.469 1 31.05 ? C1 3NW 361 A 1 HETATM 2 C C2 3NW . . . B 2 -2.929 1.044 21.722 1 33.55 ? C2 3NW 361 A 1 HETATM 3 N N3 3NW . . . B 2 -2.393 2.265 22.103 1 36.12 ? N3 3NW 361 A 1 HETATM 4 C C4 3NW . . . B 2 -2.435 3.369 21.339 1 36.69 ? C4 3NW 361 A 1 HETATM 5 N N5 3NW . . . B 2 -3.035 3.295 20.123 1 28.9 ? N5 3NW 361 A 1 HETATM 6 C C6 3NW . . . B 2 -3.6 2.094 19.672 1 25.98 ? C6 3NW 361 A 1 HETATM 7 C C7 3NW . . . B 2 -2.804 -0.09 22.68 1 31.98 ? C7 3NW 361 A 1 HETATM 8 C C8 3NW . . . B 2 -2.998 -1.472 22.439 1 31.42 ? C8 3NW 361 A 1 HETATM 9 N N9 3NW . . . B 2 -2.78 -2.154 23.593 1 33 ? N9 3NW 361 A 1 HETATM 10 C C10 3NW . . . B 2 -2.439 -1.408 24.677 1 34.17 ? C10 3NW 361 A 1 HETATM 11 S S11 3NW . . . B 2 -2.374 0.251 24.28 1 31.77 ? S11 3NW 361 A 1 HETATM 12 N N12 3NW . . . B 2 -2.168 -1.984 26.004 1 34.62 ? N12 3NW 361 A 1 HETATM 13 C C13 3NW . . . B 2 -1.704 -1.18 27.157 1 35.98 ? C13 3NW 361 A 1 HETATM 14 C C14 3NW . . . B 2 -0.204 -0.925 27.022 1 35.07 ? C14 3NW 361 A 1 HETATM 15 C C15 3NW . . . B 2 -1.858 -1.962 28.451 1 34.83 ? C15 3NW 361 A 1 HETATM 16 N N16 3NW . . . B 2 -1.865 4.508 21.841 1 43.27 ? N16 3NW 361 A 1 HETATM 17 C C17 3NW . . . B 2 -5.595 1.695 15.716 1 27.21 ? C17 3NW 361 A 1 HETATM 18 C C18 3NW . . . B 2 -4.266 1.965 18.346 1 28.76 ? C18 3NW 361 A 1 HETATM 19 C C19 3NW . . . B 2 -3.593 2.312 17.099 1 26.65 ? C19 3NW 361 A 1 HETATM 20 C C20 3NW . . . B 2 -4.238 2.185 15.795 1 27.07 ? C20 3NW 361 A 1 HETATM 21 C C21 3NW . . . B 2 -6.267 1.348 16.947 1 24.3 ? C21 3NW 361 A 1 HETATM 22 C C22 3NW . . . B 2 -5.654 1.465 18.237 1 27.66 ? C22 3NW 361 A 1 HETATM 23 C C23 3NW . . . B 2 -2.179 2.832 17.065 1 28.22 ? C23 3NW 361 A 1 HETATM 24 C C24 3NW . . . B 2 1.967 5.986 22.127 1 63.36 ? C24 3NW 361 A 1 HETATM 25 N N25 3NW . . . B 2 0.503 6.188 22.007 1 61.57 ? N25 3NW 361 A 1 HETATM 26 C C26 3NW . . . B 2 -0.161 5.669 23.222 1 57.62 ? C26 3NW 361 A 1 HETATM 27 C C27 3NW . . . B 2 -0.859 4.359 22.908 1 48.11 ? C27 3NW 361 A 1 HETATM 28 C C28 3NW . . . B 2 0.193 7.624 21.934 1 61.85 ? C28 3NW 361 A 1 HETATM 29 N N29 3NW . . . B 2 -1.955 3.649 15.873 1 28.79 ? N29 3NW 361 A 1 HETATM 30 C C30 3NW . . . B 2 -0.782 3.574 15.196 1 26.33 ? C30 3NW 361 A 1 HETATM 31 N N31 3NW . . . B 2 -0.681 4.467 14.192 1 22.13 ? N31 3NW 361 A 1 HETATM 32 O O32 3NW . . . B 2 0.099 2.767 15.476 1 25 ? O32 3NW 361 A 1 HETATM 33 C C33 3NW . . . B 2 0.532 4.464 13.365 1 20.97 ? C33 3NW 361 A 1 HETATM 34 C C34 3NW . . . B 2 0.116 4.318 11.894 1 20.09 ? C34 3NW 361 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 215 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 34 #