data_3NY8 # _model_server_result.job_id CeRb8OHXfgwZWBsTNIJXyg _model_server_result.datetime_utc '2024-11-05 22:58:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ny8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1204}' # _entry.id 3NY8 # _exptl.entry_id 3NY8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3NY8 _cell.length_a 40.711 _cell.length_b 76.148 _cell.length_c 174.207 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NY8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 114 A CYS 106 1_555 A SG CYS 199 A CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 A SG CYS 192 A CYS 184 1_555 A SG CYS 198 A CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 362 n n C1 O2 OLA sing 363 n n C1 C2 OLA sing 364 n n O2 HO2 OLA sing 365 n n C2 C3 OLA sing 366 n n C2 H21 OLA sing 367 n n C2 H22 OLA sing 368 n n C3 C4 OLA sing 369 n n C3 H31 OLA sing 370 n n C3 H32 OLA sing 371 n n C4 C5 OLA sing 372 n n C4 H41 OLA sing 373 n n C4 H42 OLA sing 374 n n C5 C6 OLA sing 375 n n C5 H51 OLA sing 376 n n C5 H52 OLA sing 377 n n C6 C7 OLA sing 378 n n C6 H61 OLA sing 379 n n C6 H62 OLA sing 380 n n C7 C8 OLA sing 381 n n C7 H71 OLA sing 382 n n C7 H72 OLA sing 383 n n C8 C9 OLA sing 384 n n C8 H81 OLA sing 385 n n C8 H82 OLA sing 386 n n C9 C10 OLA doub 387 z n C9 H9 OLA sing 388 n n C10 C11 OLA sing 389 n n C10 H10 OLA sing 390 n n C11 C12 OLA sing 391 n n C11 H111 OLA sing 392 n n C11 H112 OLA sing 393 n n C12 C13 OLA sing 394 n n C12 H121 OLA sing 395 n n C12 H122 OLA sing 396 n n C13 C14 OLA sing 397 n n C13 H131 OLA sing 398 n n C13 H132 OLA sing 399 n n C14 C15 OLA sing 400 n n C14 H141 OLA sing 401 n n C14 H142 OLA sing 402 n n C15 C16 OLA sing 403 n n C15 H151 OLA sing 404 n n C15 H152 OLA sing 405 n n C16 C17 OLA sing 406 n n C16 H161 OLA sing 407 n n C16 H162 OLA sing 408 n n C17 C18 OLA sing 409 n n C17 H171 OLA sing 410 n n C17 H172 OLA sing 411 n n C18 H181 OLA sing 412 n n C18 H182 OLA sing 413 n n C18 H183 OLA sing 414 n n # _atom_sites.entry_id 3NY8 _atom_sites.fract_transf_matrix[1][1] 0.024563 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013132 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00574 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CLR A 1 1201 1201 CLR CLR . C 2 CLR A 1 1202 1202 CLR CLR . D 3 JRZ A 1 1203 1203 JRZ JRZ . E 4 OLA A 1 1204 1204 OLA OLA . F 5 OLC A 1 1205 1205 OLC OLC . G 5 OLC A 1 1206 1206 OLC OLC . H 6 PGE A 1 1207 1207 PGE PGE . I 7 HOH A 1 1208 1208 HOH HOH . I 7 HOH A 2 1209 1209 HOH HOH . I 7 HOH A 3 1210 1210 HOH HOH . I 7 HOH A 4 1211 1211 HOH HOH . I 7 HOH A 5 1212 1212 HOH HOH . I 7 HOH A 6 1213 1213 HOH HOH . I 7 HOH A 7 1214 1214 HOH HOH . I 7 HOH A 8 1215 1215 HOH HOH . I 7 HOH A 9 1216 1216 HOH HOH . I 7 HOH A 10 1217 1217 HOH HOH . I 7 HOH A 11 1218 1218 HOH HOH . I 7 HOH A 12 1219 1219 HOH HOH . I 7 HOH A 13 1220 1220 HOH HOH . I 7 HOH A 14 1221 1221 HOH HOH . I 7 HOH A 15 1222 1222 HOH HOH . I 7 HOH A 16 1223 1223 HOH HOH . I 7 HOH A 17 1224 1224 HOH HOH . I 7 HOH A 18 1225 1225 HOH HOH . I 7 HOH A 19 1226 1226 HOH HOH . I 7 HOH A 20 1227 1227 HOH HOH . I 7 HOH A 21 1228 1228 HOH HOH . I 7 HOH A 22 1229 1229 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . E 4 -9.77 20.944 58.352 1 51.68 ? C1 OLA 1204 A 1 HETATM 2 O O1 OLA . . . E 4 -8.814 21.633 58.794 1 50.39 ? O1 OLA 1204 A 1 HETATM 3 O O2 OLA . . . E 4 -10.584 20.374 59.138 1 50.77 ? O2 OLA 1204 A 1 HETATM 4 C C2 OLA . . . E 4 -9.928 20.805 56.855 1 51.72 ? C2 OLA 1204 A 1 HETATM 5 C C3 OLA . . . E 4 -8.566 20.495 56.239 1 51.28 ? C3 OLA 1204 A 1 HETATM 6 C C4 OLA . . . E 4 -8.712 20.191 54.753 1 50.56 ? C4 OLA 1204 A 1 HETATM 7 C C5 OLA . . . E 4 -7.414 20.479 54.01 1 50.66 ? C5 OLA 1204 A 1 HETATM 8 C C6 OLA . . . E 4 -7.667 21.178 52.682 1 50.65 ? C6 OLA 1204 A 1 HETATM 9 C C7 OLA . . . E 4 -8.395 20.256 51.711 1 50.36 ? C7 OLA 1204 A 1 HETATM 10 C C8 OLA . . . E 4 -8.382 20.857 50.311 1 51.01 ? C8 OLA 1204 A 1 HETATM 11 C C9 OLA . . . E 4 -7.933 19.815 49.309 1 51.94 ? C9 OLA 1204 A 1 HETATM 12 C C10 OLA . . . E 4 -7.14 20.226 48.139 1 51.49 ? C10 OLA 1204 A 1 HETATM 13 C C11 OLA . . . E 4 -7.154 19.314 46.949 1 51.64 ? C11 OLA 1204 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #