data_3NYT # _model_server_result.job_id 31Az12myhpH9D0aeEvQEMQ _model_server_result.datetime_utc '2024-11-24 23:09:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3nyt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":368}' # _entry.id 3NYT # _exptl.entry_id 3NYT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 849.479 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S,3S,4R,5R,6R)-5-(acetylamino)-6-{[(R)-{[(S)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-3-hydroxy-4-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}tetrahydro-2H-pyran-2-carboxylic acid (non-preferred name)' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.84 _cell.angle_gamma 90 _cell.entry_id 3NYT _cell.length_a 59.684 _cell.length_b 92.17 _cell.length_c 75.652 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3NYT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C NA NA . A NA 369 1_555 D O HOH . A HOH 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc2 C NA NA . A NA 369 1_555 D O HOH . A HOH 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc3 C NA NA . A NA 369 1_555 D O HOH . A HOH 569 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? # _chem_comp.formula 'C25 H34 N5 O22 P3' _chem_comp.formula_weight 849.479 _chem_comp.id ULP _chem_comp.mon_nstd_flag . _chem_comp.name '(2S,3S,4R,5R,6R)-5-(acetylamino)-6-{[(R)-{[(S)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-3-hydroxy-4-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}tetrahydro-2H-pyran-2-carboxylic acid (non-preferred name)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OP1 P ULP doub 330 n n OP3 P ULP sing 331 n n P OP2 ULP sing 332 n n P OP4 ULP sing 333 n n C2 N1 ULP sing 334 n n C6 N1 ULP sing 335 n n N1 C1C ULP sing 336 n n N3 C2 ULP sing 337 n n C2 O2 ULP doub 338 n n "C4'A" C3 ULP doub 339 n y C3 O3 ULP sing 340 n n C3 "C2'A" ULP sing 341 n y C4 N3 ULP sing 342 n n O3 HO3 ULP sing 343 n n O4 C4 ULP doub 344 n n C4 C5 ULP sing 345 n n C5 C6 ULP doub 346 n n C5 H5 ULP sing 347 n n C6 H6 ULP sing 348 n n O1A PA ULP doub 349 n n PA O2A ULP sing 350 n n PA O3A ULP sing 351 n n PA O5C ULP sing 352 n n O3A PB ULP sing 353 n n O2B PB ULP doub 354 n n PB O3B ULP sing 355 n n PB O1B ULP sing 356 n n "O'P" C6' ULP sing 357 n n "O'P" "HO'P" ULP sing 358 n n "O'Q" C6' ULP doub 359 n n O5' C1' ULP sing 360 n n C1' O3B ULP sing 361 n n C1' C2' ULP sing 362 n n C1' H1' ULP sing 363 n n "C6'A" N1' ULP sing 364 n y N1' "C2'A" ULP doub 365 n y O1B HO1B ULP sing 366 n n C2C C1C ULP sing 367 n n C1C O4C ULP sing 368 n n C1C H1C ULP sing 369 n n C3' C2' ULP sing 370 n n C2' N2' ULP sing 371 n n C2' H2' ULP sing 372 n n N2' C7' ULP sing 373 n n N2' HN2' ULP sing 374 n n "C2'A" C2A ULP sing 375 n n C2A H2A ULP sing 376 n n C2A H2AA ULP sing 377 n n C2A H2AB ULP sing 378 n n O2A HO2A ULP sing 379 n n C2C C3C ULP sing 380 n n C2C O2C ULP sing 381 n n C2C H2C ULP sing 382 n n O2C HO2C ULP sing 383 n n C4' C3' ULP sing 384 n n C3' N3' ULP sing 385 n n C3' H3' ULP sing 386 n n C4A N3' ULP doub 387 n n C3C O3C ULP sing 388 n n C3C C4C ULP sing 389 n n C3C H3C ULP sing 390 n n O3C HO3C ULP sing 391 n n C5' C4' ULP sing 392 n n O4' C4' ULP sing 393 n n C4' H4' ULP sing 394 n n O4' HO4' ULP sing 395 n n C4A "C4'A" ULP sing 396 n n "C5'A" "C4'A" ULP sing 397 n y C4A H4A ULP sing 398 n n O4C C4C ULP sing 399 n n C5C C4C ULP sing 400 n n C4C H4C ULP sing 401 n n C6' C5' ULP sing 402 n n C5' O5' ULP sing 403 n n C5' H5' ULP sing 404 n n C5A "C5'A" ULP sing 405 n n "C5'A" "C6'A" ULP doub 406 n y OP4 C5A ULP sing 407 n n C5A H5A ULP sing 408 n n C5A H5AA ULP sing 409 n n O5C C5C ULP sing 410 n n C5C H5C ULP sing 411 n n C5C H5CA ULP sing 412 n n "C6'A" H6' ULP sing 413 n n O7' C7' ULP doub 414 n n C7' C8' ULP sing 415 n n C8' H8' ULP sing 416 n n C8' "H8'A" ULP sing 417 n n C8' "H8'B" ULP sing 418 n n OP2 HOP2 ULP sing 419 n n OP3 HOP3 ULP sing 420 n n N3 HN3 ULP sing 421 n n # _atom_sites.entry_id 3NYT _atom_sites.fract_transf_matrix[1][1] 0.016755 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006715 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01085 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014241 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ULP A 1 368 368 ULP ULP . C 3 NA A 1 369 369 NA NA . D 4 HOH A 1 0 0 HOH HOH . D 4 HOH A 2 370 370 HOH HOH . D 4 HOH A 3 371 371 HOH HOH . D 4 HOH A 4 372 372 HOH HOH . D 4 HOH A 5 373 373 HOH HOH . D 4 HOH A 6 374 374 HOH HOH . D 4 HOH A 7 375 375 HOH HOH . D 4 HOH A 8 376 376 HOH HOH . D 4 HOH A 9 377 377 HOH HOH . D 4 HOH A 10 378 378 HOH HOH . D 4 HOH A 11 379 379 HOH HOH . D 4 HOH A 12 380 380 HOH HOH . D 4 HOH A 13 381 381 HOH HOH . D 4 HOH A 14 382 382 HOH HOH . D 4 HOH A 15 383 383 HOH HOH . D 4 HOH A 16 384 384 HOH HOH . D 4 HOH A 17 385 385 HOH HOH . D 4 HOH A 18 386 386 HOH HOH . D 4 HOH A 19 387 387 HOH HOH . D 4 HOH A 20 388 388 HOH HOH . D 4 HOH A 21 389 389 HOH HOH . D 4 HOH A 22 390 390 HOH HOH . D 4 HOH A 23 391 391 HOH HOH . D 4 HOH A 24 392 392 HOH HOH . D 4 HOH A 25 393 393 HOH HOH . D 4 HOH A 26 394 394 HOH HOH . D 4 HOH A 27 395 395 HOH HOH . D 4 HOH A 28 396 396 HOH HOH . D 4 HOH A 29 397 397 HOH HOH . D 4 HOH A 30 398 398 HOH HOH . D 4 HOH A 31 399 399 HOH HOH . D 4 HOH A 32 400 400 HOH HOH . D 4 HOH A 33 401 401 HOH HOH . D 4 HOH A 34 402 402 HOH HOH . D 4 HOH A 35 403 403 HOH HOH . D 4 HOH A 36 404 404 HOH HOH . D 4 HOH A 37 405 405 HOH HOH . D 4 HOH A 38 406 406 HOH HOH . D 4 HOH A 39 407 407 HOH HOH . D 4 HOH A 40 408 408 HOH HOH . D 4 HOH A 41 409 409 HOH HOH . D 4 HOH A 42 410 410 HOH HOH . D 4 HOH A 43 411 411 HOH HOH . D 4 HOH A 44 412 412 HOH HOH . D 4 HOH A 45 413 413 HOH HOH . D 4 HOH A 46 414 414 HOH HOH . D 4 HOH A 47 415 415 HOH HOH . D 4 HOH A 48 416 416 HOH HOH . D 4 HOH A 49 417 417 HOH HOH . D 4 HOH A 50 418 418 HOH HOH . D 4 HOH A 51 419 419 HOH HOH . D 4 HOH A 52 420 420 HOH HOH . D 4 HOH A 53 421 421 HOH HOH . D 4 HOH A 54 422 422 HOH HOH . D 4 HOH A 55 423 423 HOH HOH . D 4 HOH A 56 424 424 HOH HOH . D 4 HOH A 57 425 425 HOH HOH . D 4 HOH A 58 426 426 HOH HOH . D 4 HOH A 59 427 427 HOH HOH . D 4 HOH A 60 428 428 HOH HOH . D 4 HOH A 61 429 429 HOH HOH . D 4 HOH A 62 430 430 HOH HOH . D 4 HOH A 63 431 431 HOH HOH . D 4 HOH A 64 432 432 HOH HOH . D 4 HOH A 65 433 433 HOH HOH . D 4 HOH A 66 434 434 HOH HOH . D 4 HOH A 67 435 435 HOH HOH . D 4 HOH A 68 436 436 HOH HOH . D 4 HOH A 69 437 437 HOH HOH . D 4 HOH A 70 438 438 HOH HOH . D 4 HOH A 71 439 439 HOH HOH . D 4 HOH A 72 440 440 HOH HOH . D 4 HOH A 73 441 441 HOH HOH . D 4 HOH A 74 442 442 HOH HOH . D 4 HOH A 75 443 443 HOH HOH . D 4 HOH A 76 444 444 HOH HOH . D 4 HOH A 77 445 445 HOH HOH . D 4 HOH A 78 446 446 HOH HOH . D 4 HOH A 79 447 447 HOH HOH . D 4 HOH A 80 448 448 HOH HOH . D 4 HOH A 81 449 449 HOH HOH . D 4 HOH A 82 450 450 HOH HOH . D 4 HOH A 83 451 0 HOH HOH . D 4 HOH A 84 452 452 HOH HOH . D 4 HOH A 85 453 453 HOH HOH . D 4 HOH A 86 454 454 HOH HOH . D 4 HOH A 87 455 455 HOH HOH . D 4 HOH A 88 456 456 HOH HOH . D 4 HOH A 89 457 457 HOH HOH . D 4 HOH A 90 458 458 HOH HOH . D 4 HOH A 91 459 459 HOH HOH . D 4 HOH A 92 460 460 HOH HOH . D 4 HOH A 93 461 461 HOH HOH . D 4 HOH A 94 462 462 HOH HOH . D 4 HOH A 95 463 463 HOH HOH . D 4 HOH A 96 464 464 HOH HOH . D 4 HOH A 97 465 465 HOH HOH . D 4 HOH A 98 466 466 HOH HOH . D 4 HOH A 99 467 467 HOH HOH . D 4 HOH A 100 468 468 HOH HOH . D 4 HOH A 101 469 469 HOH HOH . D 4 HOH A 102 470 470 HOH HOH . D 4 HOH A 103 471 471 HOH HOH . D 4 HOH A 104 472 472 HOH HOH . D 4 HOH A 105 473 473 HOH HOH . D 4 HOH A 106 474 474 HOH HOH . D 4 HOH A 107 475 475 HOH HOH . D 4 HOH A 108 476 476 HOH HOH . D 4 HOH A 109 477 477 HOH HOH . D 4 HOH A 110 478 478 HOH HOH . D 4 HOH A 111 479 479 HOH HOH . D 4 HOH A 112 480 480 HOH HOH . D 4 HOH A 113 481 481 HOH HOH . D 4 HOH A 114 482 482 HOH HOH . D 4 HOH A 115 483 483 HOH HOH . D 4 HOH A 116 484 484 HOH HOH . D 4 HOH A 117 485 485 HOH HOH . D 4 HOH A 118 486 486 HOH HOH . D 4 HOH A 119 487 487 HOH HOH . D 4 HOH A 120 488 488 HOH HOH . D 4 HOH A 121 489 489 HOH HOH . D 4 HOH A 122 490 490 HOH HOH . D 4 HOH A 123 491 491 HOH HOH . D 4 HOH A 124 492 492 HOH HOH . D 4 HOH A 125 493 0 HOH HOH . D 4 HOH A 126 494 494 HOH HOH . D 4 HOH A 127 495 495 HOH HOH . D 4 HOH A 128 496 496 HOH HOH . D 4 HOH A 129 497 497 HOH HOH . D 4 HOH A 130 498 498 HOH HOH . D 4 HOH A 131 499 499 HOH HOH . D 4 HOH A 132 500 500 HOH HOH . D 4 HOH A 133 501 501 HOH HOH . D 4 HOH A 134 502 502 HOH HOH . D 4 HOH A 135 503 503 HOH HOH . D 4 HOH A 136 504 504 HOH HOH . D 4 HOH A 137 505 505 HOH HOH . D 4 HOH A 138 506 506 HOH HOH . D 4 HOH A 139 507 507 HOH HOH . D 4 HOH A 140 508 508 HOH HOH . D 4 HOH A 141 509 509 HOH HOH . D 4 HOH A 142 510 510 HOH HOH . D 4 HOH A 143 511 511 HOH HOH . D 4 HOH A 144 512 512 HOH HOH . D 4 HOH A 145 513 513 HOH HOH . D 4 HOH A 146 514 514 HOH HOH . D 4 HOH A 147 515 515 HOH HOH . D 4 HOH A 148 516 516 HOH HOH . D 4 HOH A 149 517 517 HOH HOH . D 4 HOH A 150 518 518 HOH HOH . D 4 HOH A 151 519 519 HOH HOH . D 4 HOH A 152 520 520 HOH HOH . D 4 HOH A 153 521 521 HOH HOH . D 4 HOH A 154 522 522 HOH HOH . D 4 HOH A 155 523 523 HOH HOH . D 4 HOH A 156 524 524 HOH HOH . D 4 HOH A 157 525 525 HOH HOH . D 4 HOH A 158 526 526 HOH HOH . D 4 HOH A 159 527 527 HOH HOH . D 4 HOH A 160 528 528 HOH HOH . D 4 HOH A 161 529 529 HOH HOH . D 4 HOH A 162 530 530 HOH HOH . D 4 HOH A 163 531 531 HOH HOH . D 4 HOH A 164 532 532 HOH HOH . D 4 HOH A 165 533 533 HOH HOH . D 4 HOH A 166 534 534 HOH HOH . D 4 HOH A 167 535 535 HOH HOH . D 4 HOH A 168 536 536 HOH HOH . D 4 HOH A 169 537 537 HOH HOH . D 4 HOH A 170 538 538 HOH HOH . D 4 HOH A 171 539 539 HOH HOH . D 4 HOH A 172 540 540 HOH HOH . D 4 HOH A 173 541 541 HOH HOH . D 4 HOH A 174 542 542 HOH HOH . D 4 HOH A 175 543 543 HOH HOH . D 4 HOH A 176 544 544 HOH HOH . D 4 HOH A 177 545 545 HOH HOH . D 4 HOH A 178 546 546 HOH HOH . D 4 HOH A 179 547 547 HOH HOH . D 4 HOH A 180 548 548 HOH HOH . D 4 HOH A 181 549 549 HOH HOH . D 4 HOH A 182 550 550 HOH HOH . D 4 HOH A 183 551 551 HOH HOH . D 4 HOH A 184 552 552 HOH HOH . D 4 HOH A 185 553 553 HOH HOH . D 4 HOH A 186 554 554 HOH HOH . D 4 HOH A 187 555 555 HOH HOH . D 4 HOH A 188 556 556 HOH HOH . D 4 HOH A 189 557 557 HOH HOH . D 4 HOH A 190 558 558 HOH HOH . D 4 HOH A 191 559 559 HOH HOH . D 4 HOH A 192 560 560 HOH HOH . D 4 HOH A 193 561 561 HOH HOH . D 4 HOH A 194 562 562 HOH HOH . D 4 HOH A 195 563 563 HOH HOH . D 4 HOH A 196 564 564 HOH HOH . D 4 HOH A 197 565 565 HOH HOH . D 4 HOH A 198 566 566 HOH HOH . D 4 HOH A 199 567 567 HOH HOH . D 4 HOH A 200 568 568 HOH HOH . D 4 HOH A 201 569 569 HOH HOH . D 4 HOH A 202 570 570 HOH HOH . D 4 HOH A 203 571 571 HOH HOH . D 4 HOH A 204 572 572 HOH HOH . D 4 HOH A 205 573 573 HOH HOH . D 4 HOH A 206 574 574 HOH HOH . D 4 HOH A 207 575 575 HOH HOH . D 4 HOH A 208 576 576 HOH HOH . D 4 HOH A 209 577 577 HOH HOH . D 4 HOH A 210 578 578 HOH HOH . D 4 HOH A 211 579 579 HOH HOH . D 4 HOH A 212 580 580 HOH HOH . D 4 HOH A 213 581 581 HOH HOH . D 4 HOH A 214 582 582 HOH HOH . D 4 HOH A 215 583 583 HOH HOH . D 4 HOH A 216 584 584 HOH HOH . D 4 HOH A 217 585 585 HOH HOH . D 4 HOH A 218 586 586 HOH HOH . D 4 HOH A 219 587 587 HOH HOH . D 4 HOH A 220 588 588 HOH HOH . D 4 HOH A 221 589 589 HOH HOH . D 4 HOH A 222 590 590 HOH HOH . D 4 HOH A 223 591 591 HOH HOH . D 4 HOH A 224 592 592 HOH HOH . D 4 HOH A 225 593 593 HOH HOH . D 4 HOH A 226 594 594 HOH HOH . D 4 HOH A 227 595 595 HOH HOH . D 4 HOH A 228 596 596 HOH HOH . D 4 HOH A 229 597 597 HOH HOH . D 4 HOH A 230 598 598 HOH HOH . D 4 HOH A 231 599 599 HOH HOH . D 4 HOH A 232 600 600 HOH HOH . D 4 HOH A 233 601 601 HOH HOH . D 4 HOH A 234 602 602 HOH HOH . D 4 HOH A 235 603 603 HOH HOH . D 4 HOH A 236 604 604 HOH HOH . D 4 HOH A 237 605 605 HOH HOH . D 4 HOH A 238 606 606 HOH HOH . D 4 HOH A 239 607 607 HOH HOH . D 4 HOH A 240 608 608 HOH HOH . D 4 HOH A 241 609 609 HOH HOH . D 4 HOH A 242 610 610 HOH HOH . D 4 HOH A 243 611 611 HOH HOH . D 4 HOH A 244 612 612 HOH HOH . D 4 HOH A 245 613 613 HOH HOH . D 4 HOH A 246 614 614 HOH HOH . D 4 HOH A 247 615 615 HOH HOH . D 4 HOH A 248 616 616 HOH HOH . D 4 HOH A 249 617 617 HOH HOH . D 4 HOH A 250 618 618 HOH HOH . D 4 HOH A 251 619 619 HOH HOH . D 4 HOH A 252 620 620 HOH HOH . D 4 HOH A 253 621 621 HOH HOH . D 4 HOH A 254 622 622 HOH HOH . D 4 HOH A 255 623 623 HOH HOH . D 4 HOH A 256 624 624 HOH HOH . D 4 HOH A 257 625 625 HOH HOH . D 4 HOH A 258 626 626 HOH HOH . D 4 HOH A 259 627 627 HOH HOH . D 4 HOH A 260 628 628 HOH HOH . D 4 HOH A 261 629 629 HOH HOH . D 4 HOH A 262 630 630 HOH HOH . D 4 HOH A 263 631 631 HOH HOH . D 4 HOH A 264 632 632 HOH HOH . D 4 HOH A 265 633 633 HOH HOH . D 4 HOH A 266 634 634 HOH HOH . D 4 HOH A 267 635 635 HOH HOH . D 4 HOH A 268 636 636 HOH HOH . D 4 HOH A 269 637 637 HOH HOH . D 4 HOH A 270 638 638 HOH HOH . D 4 HOH A 271 639 639 HOH HOH . D 4 HOH A 272 640 640 HOH HOH . D 4 HOH A 273 641 641 HOH HOH . D 4 HOH A 274 642 642 HOH HOH . D 4 HOH A 275 643 643 HOH HOH . D 4 HOH A 276 644 644 HOH HOH . D 4 HOH A 277 645 645 HOH HOH . D 4 HOH A 278 646 646 HOH HOH . D 4 HOH A 279 647 647 HOH HOH . D 4 HOH A 280 648 648 HOH HOH . D 4 HOH A 281 649 649 HOH HOH . D 4 HOH A 282 650 650 HOH HOH . D 4 HOH A 283 651 651 HOH HOH . D 4 HOH A 284 652 652 HOH HOH . D 4 HOH A 285 653 653 HOH HOH . D 4 HOH A 286 654 654 HOH HOH . D 4 HOH A 287 655 655 HOH HOH . D 4 HOH A 288 656 656 HOH HOH . D 4 HOH A 289 657 657 HOH HOH . D 4 HOH A 290 658 658 HOH HOH . D 4 HOH A 291 659 659 HOH HOH . D 4 HOH A 292 660 660 HOH HOH . D 4 HOH A 293 661 661 HOH HOH . D 4 HOH A 294 662 662 HOH HOH . D 4 HOH A 295 663 663 HOH HOH . D 4 HOH A 296 664 664 HOH HOH . D 4 HOH A 297 665 665 HOH HOH . D 4 HOH A 298 666 666 HOH HOH . D 4 HOH A 299 667 667 HOH HOH . D 4 HOH A 300 668 668 HOH HOH . D 4 HOH A 301 669 669 HOH HOH . D 4 HOH A 302 670 670 HOH HOH . D 4 HOH A 303 671 671 HOH HOH . D 4 HOH A 304 672 672 HOH HOH . D 4 HOH A 305 673 673 HOH HOH . D 4 HOH A 306 674 674 HOH HOH . D 4 HOH A 307 675 675 HOH HOH . D 4 HOH A 308 676 676 HOH HOH . D 4 HOH A 309 677 677 HOH HOH . D 4 HOH A 310 678 678 HOH HOH . D 4 HOH A 311 679 679 HOH HOH . D 4 HOH A 312 680 680 HOH HOH . D 4 HOH A 313 681 681 HOH HOH . D 4 HOH A 314 682 682 HOH HOH . D 4 HOH A 315 683 683 HOH HOH . D 4 HOH A 316 684 684 HOH HOH . D 4 HOH A 317 685 685 HOH HOH . D 4 HOH A 318 686 686 HOH HOH . D 4 HOH A 319 687 687 HOH HOH . D 4 HOH A 320 688 688 HOH HOH . D 4 HOH A 321 689 689 HOH HOH . D 4 HOH A 322 690 690 HOH HOH . D 4 HOH A 323 691 691 HOH HOH . D 4 HOH A 324 692 692 HOH HOH . D 4 HOH A 325 693 693 HOH HOH . D 4 HOH A 326 694 694 HOH HOH . D 4 HOH A 327 695 695 HOH HOH . D 4 HOH A 328 696 696 HOH HOH . D 4 HOH A 329 697 697 HOH HOH . D 4 HOH A 330 698 698 HOH HOH . D 4 HOH A 331 699 699 HOH HOH . D 4 HOH A 332 700 700 HOH HOH . D 4 HOH A 333 701 701 HOH HOH . D 4 HOH A 334 702 702 HOH HOH . D 4 HOH A 335 703 703 HOH HOH . D 4 HOH A 336 704 704 HOH HOH . D 4 HOH A 337 705 705 HOH HOH . D 4 HOH A 338 706 706 HOH HOH . D 4 HOH A 339 707 707 HOH HOH . D 4 HOH A 340 708 708 HOH HOH . D 4 HOH A 341 709 709 HOH HOH . D 4 HOH A 342 710 710 HOH HOH . D 4 HOH A 343 711 711 HOH HOH . D 4 HOH A 344 712 712 HOH HOH . D 4 HOH A 345 713 713 HOH HOH . D 4 HOH A 346 714 714 HOH HOH . D 4 HOH A 347 715 715 HOH HOH . D 4 HOH A 348 716 716 HOH HOH . D 4 HOH A 349 717 717 HOH HOH . D 4 HOH A 350 718 718 HOH HOH . D 4 HOH A 351 719 719 HOH HOH . D 4 HOH A 352 720 720 HOH HOH . D 4 HOH A 353 721 721 HOH HOH . D 4 HOH A 354 722 722 HOH HOH . D 4 HOH A 355 723 723 HOH HOH . D 4 HOH A 356 724 724 HOH HOH . D 4 HOH A 357 725 725 HOH HOH . D 4 HOH A 358 726 726 HOH HOH . D 4 HOH A 359 727 727 HOH HOH . D 4 HOH A 360 728 728 HOH HOH . D 4 HOH A 361 729 729 HOH HOH . D 4 HOH A 362 730 730 HOH HOH . D 4 HOH A 363 731 731 HOH HOH . D 4 HOH A 364 732 732 HOH HOH . D 4 HOH A 365 733 733 HOH HOH . D 4 HOH A 366 734 734 HOH HOH . D 4 HOH A 367 735 735 HOH HOH . D 4 HOH A 368 736 736 HOH HOH . D 4 HOH A 369 737 737 HOH HOH . D 4 HOH A 370 738 738 HOH HOH . D 4 HOH A 371 739 739 HOH HOH . D 4 HOH A 372 740 740 HOH HOH . D 4 HOH A 373 741 741 HOH HOH . D 4 HOH A 374 742 742 HOH HOH . D 4 HOH A 375 743 743 HOH HOH . D 4 HOH A 376 744 744 HOH HOH . D 4 HOH A 377 745 745 HOH HOH . D 4 HOH A 378 746 746 HOH HOH . D 4 HOH A 379 747 747 HOH HOH . D 4 HOH A 380 748 0 HOH HOH . D 4 HOH A 381 749 0 HOH HOH . D 4 HOH A 382 750 750 HOH HOH . D 4 HOH A 383 751 751 HOH HOH . D 4 HOH A 384 752 752 HOH HOH . D 4 HOH A 385 753 753 HOH HOH . D 4 HOH A 386 754 754 HOH HOH . D 4 HOH A 387 755 755 HOH HOH . D 4 HOH A 388 756 756 HOH HOH . D 4 HOH A 389 757 757 HOH HOH . D 4 HOH A 390 758 758 HOH HOH . D 4 HOH A 391 759 759 HOH HOH . D 4 HOH A 392 760 0 HOH HOH . D 4 HOH A 393 761 761 HOH HOH . D 4 HOH A 394 763 763 HOH HOH . D 4 HOH A 395 764 764 HOH HOH . D 4 HOH A 396 765 765 HOH HOH . D 4 HOH A 397 766 766 HOH HOH . D 4 HOH A 398 767 767 HOH HOH . D 4 HOH A 399 768 768 HOH HOH . D 4 HOH A 400 769 769 HOH HOH . D 4 HOH A 401 770 770 HOH HOH . D 4 HOH A 402 771 771 HOH HOH . D 4 HOH A 403 772 772 HOH HOH . D 4 HOH A 404 773 773 HOH HOH . D 4 HOH A 405 774 774 HOH HOH . D 4 HOH A 406 775 775 HOH HOH . D 4 HOH A 407 776 776 HOH HOH . D 4 HOH A 408 777 777 HOH HOH . D 4 HOH A 409 778 778 HOH HOH . D 4 HOH A 410 779 779 HOH HOH . D 4 HOH A 411 780 780 HOH HOH . D 4 HOH A 412 781 781 HOH HOH . D 4 HOH A 413 782 782 HOH HOH . D 4 HOH A 414 783 783 HOH HOH . D 4 HOH A 415 784 784 HOH HOH . D 4 HOH A 416 785 785 HOH HOH . D 4 HOH A 417 786 786 HOH HOH . D 4 HOH A 418 787 787 HOH HOH . D 4 HOH A 419 788 788 HOH HOH . D 4 HOH A 420 789 789 HOH HOH . D 4 HOH A 421 790 790 HOH HOH . D 4 HOH A 422 791 791 HOH HOH . D 4 HOH A 423 792 792 HOH HOH . D 4 HOH A 424 793 793 HOH HOH . D 4 HOH A 425 794 794 HOH HOH . D 4 HOH A 426 795 795 HOH HOH . D 4 HOH A 427 796 796 HOH HOH . D 4 HOH A 428 797 797 HOH HOH . D 4 HOH A 429 799 799 HOH HOH . D 4 HOH A 430 800 800 HOH HOH . D 4 HOH A 431 801 801 HOH HOH . D 4 HOH A 432 802 802 HOH HOH . D 4 HOH A 433 803 803 HOH HOH . D 4 HOH A 434 804 804 HOH HOH . D 4 HOH A 435 805 805 HOH HOH . D 4 HOH A 436 806 806 HOH HOH . D 4 HOH A 437 807 807 HOH HOH . D 4 HOH A 438 808 808 HOH HOH . D 4 HOH A 439 809 809 HOH HOH . D 4 HOH A 440 810 810 HOH HOH . D 4 HOH A 441 811 811 HOH HOH . D 4 HOH A 442 812 812 HOH HOH . D 4 HOH A 443 813 813 HOH HOH . D 4 HOH A 444 814 814 HOH HOH . D 4 HOH A 445 815 815 HOH HOH . D 4 HOH A 446 816 816 HOH HOH . D 4 HOH A 447 817 817 HOH HOH . D 4 HOH A 448 818 818 HOH HOH . D 4 HOH A 449 819 819 HOH HOH . D 4 HOH A 450 820 820 HOH HOH . D 4 HOH A 451 821 821 HOH HOH . D 4 HOH A 452 822 822 HOH HOH . D 4 HOH A 453 823 823 HOH HOH . D 4 HOH A 454 824 824 HOH HOH . D 4 HOH A 455 825 825 HOH HOH . D 4 HOH A 456 826 826 HOH HOH . D 4 HOH A 457 827 827 HOH HOH . D 4 HOH A 458 828 828 HOH HOH . D 4 HOH A 459 829 829 HOH HOH . D 4 HOH A 460 830 830 HOH HOH . D 4 HOH A 461 831 831 HOH HOH . D 4 HOH A 462 832 832 HOH HOH . D 4 HOH A 463 833 833 HOH HOH . D 4 HOH A 464 834 834 HOH HOH . D 4 HOH A 465 835 835 HOH HOH . D 4 HOH A 466 836 836 HOH HOH . D 4 HOH A 467 837 837 HOH HOH . D 4 HOH A 468 838 838 HOH HOH . D 4 HOH A 469 839 839 HOH HOH . D 4 HOH A 470 840 840 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P ULP . . . B 2 5.414 -9.004 7.809 1 7.42 ? P ULP 368 A 1 HETATM 2 N N1 ULP . . . B 2 12.917 -19.656 8.386 1 9.75 ? N1 ULP 368 A 1 HETATM 3 C C2 ULP . . . B 2 12.682 -20.737 7.641 1 14.5 ? C2 ULP 368 A 1 HETATM 4 O O2 ULP . . . B 2 13.183 -21.922 8.032 1 14.41 ? O2 ULP 368 A 1 HETATM 5 C C3 ULP . . . B 2 8.236 -6.937 12.474 1 8.69 ? C3 ULP 368 A 1 HETATM 6 N N3 ULP . . . B 2 11.981 -20.721 6.469 1 10.92 ? N3 ULP 368 A 1 HETATM 7 O O3 ULP . . . B 2 9.283 -7.598 13.013 1 7.96 ? O3 ULP 368 A 1 HETATM 8 C C4 ULP . . . B 2 11.444 -19.548 6.077 1 14.84 ? C4 ULP 368 A 1 HETATM 9 O O4 ULP . . . B 2 10.726 -19.599 4.934 1 12.36 ? O4 ULP 368 A 1 HETATM 10 C C5 ULP . . . B 2 11.64 -18.372 6.803 1 13.25 ? C5 ULP 368 A 1 HETATM 11 C C6 ULP . . . B 2 12.403 -18.492 7.95 1 12.02 ? C6 ULP 368 A 1 HETATM 12 P PA ULP . . . B 2 14.374 -14.883 8.171 1 13.58 ? PA ULP 368 A 1 HETATM 13 P PB ULP . . . B 2 14.042 -12.56 9.857 1 17.39 ? PB ULP 368 A 1 HETATM 14 O "O'P" ULP . . . B 2 9.795 -10.189 6.088 1 17.92 ? "O'P" ULP 368 A 1 HETATM 15 O "O'Q" ULP . . . B 2 11.845 -10.873 5.752 1 17.2 ? "O'Q" ULP 368 A 1 HETATM 16 C C1' ULP . . . B 2 12.659 -10.324 9.653 1 12.04 ? C1' ULP 368 A 1 HETATM 17 N N1' ULP . . . B 2 6.65 -5.195 12.538 1 6.82 ? N1' ULP 368 A 1 HETATM 18 O O1A ULP . . . B 2 13.871 -15.175 6.786 1 14.03 ? O1A ULP 368 A 1 HETATM 19 O O1B ULP . . . B 2 14.123 -13.433 11.087 1 21.79 ? O1B ULP 368 A 1 HETATM 20 C C1C ULP . . . B 2 13.718 -19.763 9.633 1 9.77 ? C1C ULP 368 A 1 HETATM 21 C C2' ULP . . . B 2 11.67 -9.605 10.567 1 12.41 ? C2' ULP 368 A 1 HETATM 22 N N2' ULP . . . B 2 12.049 -10.023 11.914 1 11.94 ? N2' ULP 368 A 1 HETATM 23 C "C2'A" ULP . . . B 2 7.671 -5.84 13.12 1 8.83 ? "C2'A" ULP 368 A 1 HETATM 24 C C2A ULP . . . B 2 8.158 -5.381 14.482 1 7.22 ? C2A ULP 368 A 1 HETATM 25 O O2A ULP . . . B 2 15.89 -14.805 8.289 1 16.88 ? O2A ULP 368 A 1 HETATM 26 O O2B ULP . . . B 2 15.193 -11.675 9.434 1 23.67 ? O2B ULP 368 A 1 HETATM 27 C C2C ULP . . . B 2 15.208 -19.792 9.347 1 12.62 ? C2C ULP 368 A 1 HETATM 28 O O2C ULP . . . B 2 15.847 -20.469 10.453 1 14.83 ? O2C ULP 368 A 1 HETATM 29 C C3' ULP . . . B 2 10.217 -10.016 10.28 1 12.45 ? C3' ULP 368 A 1 HETATM 30 N N3' ULP . . . B 2 9.441 -8.979 10.973 1 13.71 ? N3' ULP 368 A 1 HETATM 31 O O3A ULP . . . B 2 13.626 -13.517 8.612 1 11.59 ? O3A ULP 368 A 1 HETATM 32 O O3B ULP . . . B 2 12.631 -11.721 9.919 1 11.36 ? O3B ULP 368 A 1 HETATM 33 C C3C ULP . . . B 2 15.625 -18.344 9.418 1 12.55 ? C3C ULP 368 A 1 HETATM 34 O O3C ULP . . . B 2 17.012 -18.125 9.662 1 16.03 ? O3C ULP 368 A 1 HETATM 35 C C4' ULP . . . B 2 9.932 -9.975 8.765 1 11.83 ? C4' ULP 368 A 1 HETATM 36 O O4' ULP . . . B 2 8.72 -10.744 8.674 1 14.36 ? O4' ULP 368 A 1 HETATM 37 C "C4'A" ULP . . . B 2 7.787 -7.32 11.219 1 7.13 ? "C4'A" ULP 368 A 1 HETATM 38 C C4A ULP . . . B 2 8.43 -8.402 10.447 1 8.7 ? C4A ULP 368 A 1 HETATM 39 C C4C ULP . . . B 2 14.789 -17.795 10.545 1 13.17 ? C4C ULP 368 A 1 HETATM 40 O O4C ULP . . . B 2 13.584 -18.531 10.341 1 13.71 ? O4C ULP 368 A 1 HETATM 41 C C5' ULP . . . B 2 11.011 -10.742 7.998 1 12.71 ? C5' ULP 368 A 1 HETATM 42 O O5' ULP . . . B 2 12.294 -10.171 8.28 1 12.05 ? O5' ULP 368 A 1 HETATM 43 C "C5'A" ULP . . . B 2 6.716 -6.649 10.648 1 5.73 ? "C5'A" ULP 368 A 1 HETATM 44 C C5A ULP . . . B 2 6.094 -6.913 9.264 1 7.87 ? C5A ULP 368 A 1 HETATM 45 C C5C ULP . . . B 2 14.423 -16.325 10.404 1 14.81 ? C5C ULP 368 A 1 HETATM 46 O O5C ULP . . . B 2 13.815 -16.041 9.138 1 18 ? O5C ULP 368 A 1 HETATM 47 C C6' ULP . . . B 2 10.887 -10.597 6.503 1 20.87 ? C6' ULP 368 A 1 HETATM 48 C "C6'A" ULP . . . B 2 6.165 -5.578 11.339 1 6.44 ? "C6'A" ULP 368 A 1 HETATM 49 C C7' ULP . . . B 2 12.365 -9.078 12.793 1 8.46 ? C7' ULP 368 A 1 HETATM 50 O O7' ULP . . . B 2 12.376 -7.874 12.576 1 11.55 ? O7' ULP 368 A 1 HETATM 51 C C8' ULP . . . B 2 12.794 -9.572 14.151 1 12.7 ? C8' ULP 368 A 1 HETATM 52 O OP1 ULP . . . B 2 5.022 -7.978 6.779 1 7.75 ? OP1 ULP 368 A 1 HETATM 53 O OP2 ULP . . . B 2 4.397 -10.045 8.071 1 6.35 ? OP2 ULP 368 A 1 HETATM 54 O OP3 ULP . . . B 2 6.839 -9.5 7.519 1 8.33 ? OP3 ULP 368 A 1 HETATM 55 O OP4 ULP . . . B 2 5.456 -8.215 9.241 1 7.48 ? OP4 ULP 368 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 55 #