data_3NYX
#
_model_server_result.job_id            B043YWY111kKprDVnDGOgw 
_model_server_result.datetime_utc      '2024-10-13 14:19:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3nyx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1}' 
#
_entry.id    3NYX 
#
_exptl.entry_id    3NYX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              404.917 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-{5-[(7-chloroquinolin-4-yl)sulfanyl]-1,3,4-thiadiazol-2-yl}thiophene-2-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3NYX 
_cell.length_a            55.318 
_cell.length_b            70.436 
_cell.length_c            86.488 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3NYX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C16 H9 Cl N4 O S3' 
_chem_comp.formula_weight    404.917 
_chem_comp.id                TZ1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-{5-[(7-chloroquinolin-4-yl)sulfanyl]-1,3,4-thiadiazol-2-yl}thiophene-2-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C1 TZ1 doub 375 n y 
C1 C6 TZ1 sing 376 n y 
C1 H1 TZ1 sing 377 n n 
C7 N1 TZ1 doub 378 n y 
N1 C2 TZ1 sing 379 n y 
C12 O1 TZ1 doub 380 n n 
C10 S1 TZ1 sing 381 n n 
C9 S1 TZ1 sing 382 n n 
C6 CL1 TZ1 sing 383 n n 
C2 C3 TZ1 sing 384 n y 
N2 N3 TZ1 sing 385 n y 
N2 C11 TZ1 doub 386 n y 
C11 S2 TZ1 sing 387 n y 
C10 S2 TZ1 sing 388 n y 
C9 C3 TZ1 sing 389 n y 
C3 C4 TZ1 doub 390 n y 
N3 C10 TZ1 doub 391 n y 
C16 S3 TZ1 sing 392 n y 
C13 S3 TZ1 sing 393 n y 
C4 C5 TZ1 sing 394 n y 
C4 H4 TZ1 sing 395 n n 
N4 C11 TZ1 sing 396 n n 
N4 C12 TZ1 sing 397 n n 
N4 HN4 TZ1 sing 398 n n 
C6 C5 TZ1 doub 399 n y 
C5 H5 TZ1 sing 400 n n 
C7 C8 TZ1 sing 401 n y 
C7 H7 TZ1 sing 402 n n 
C8 C9 TZ1 doub 403 n y 
C8 H8 TZ1 sing 404 n n 
C13 C12 TZ1 sing 405 n n 
C14 C13 TZ1 doub 406 n y 
C15 C14 TZ1 sing 407 n y 
C14 H14 TZ1 sing 408 n n 
C15 C16 TZ1 doub 409 n y 
C15 H15 TZ1 sing 410 n n 
C16 H16 TZ1 sing 411 n n 
#
_atom_sites.entry_id                     3NYX 
_atom_sites.fract_transf_matrix[1][1]    0.018077 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014197 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011562 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 TZ1 A 1 1 1 TZ1 TZ1 . 
C 3 DTT A 1 1184 1 DTT DTT . 
D 3 DTT A 1 2 2 DTT DTT . 
E 4 HOH A 1 3 3 HOH HOH . 
E 4 HOH A 2 4 4 HOH HOH . 
E 4 HOH A 3 5 5 HOH HOH . 
E 4 HOH A 4 6 6 HOH HOH . 
E 4 HOH A 5 7 7 HOH HOH . 
E 4 HOH A 6 8 8 HOH HOH . 
E 4 HOH A 7 9 9 HOH HOH . 
E 4 HOH A 8 10 10 HOH HOH . 
E 4 HOH A 9 11 11 HOH HOH . 
E 4 HOH A 10 12 12 HOH HOH . 
E 4 HOH A 11 14 14 HOH HOH . 
E 4 HOH A 12 15 15 HOH HOH . 
E 4 HOH A 13 16 16 HOH HOH . 
E 4 HOH A 14 17 17 HOH HOH . 
E 4 HOH A 15 18 18 HOH HOH . 
E 4 HOH A 16 19 19 HOH HOH . 
E 4 HOH A 17 20 20 HOH HOH . 
E 4 HOH A 18 21 21 HOH HOH . 
E 4 HOH A 19 22 22 HOH HOH . 
E 4 HOH A 20 23 23 HOH HOH . 
E 4 HOH A 21 24 24 HOH HOH . 
E 4 HOH A 22 25 25 HOH HOH . 
E 4 HOH A 23 26 26 HOH HOH . 
E 4 HOH A 24 27 27 HOH HOH . 
E 4 HOH A 25 28 28 HOH HOH . 
E 4 HOH A 26 29 29 HOH HOH . 
E 4 HOH A 27 31 31 HOH HOH . 
E 4 HOH A 28 32 32 HOH HOH . 
E 4 HOH A 29 33 33 HOH HOH . 
E 4 HOH A 30 34 34 HOH HOH . 
E 4 HOH A 31 35 35 HOH HOH . 
E 4 HOH A 32 36 36 HOH HOH . 
E 4 HOH A 33 37 37 HOH HOH . 
E 4 HOH A 34 38 38 HOH HOH . 
E 4 HOH A 35 39 39 HOH HOH . 
E 4 HOH A 36 40 40 HOH HOH . 
E 4 HOH A 37 41 41 HOH HOH . 
E 4 HOH A 38 42 42 HOH HOH . 
E 4 HOH A 39 43 43 HOH HOH . 
E 4 HOH A 40 44 44 HOH HOH . 
E 4 HOH A 41 45 45 HOH HOH . 
E 4 HOH A 42 46 46 HOH HOH . 
E 4 HOH A 43 47 47 HOH HOH . 
E 4 HOH A 44 48 48 HOH HOH . 
E 4 HOH A 45 49 49 HOH HOH . 
E 4 HOH A 46 50 50 HOH HOH . 
E 4 HOH A 47 51 51 HOH HOH . 
E 4 HOH A 48 52 52 HOH HOH . 
E 4 HOH A 49 53 53 HOH HOH . 
E 4 HOH A 50 54 54 HOH HOH . 
E 4 HOH A 51 55 55 HOH HOH . 
E 4 HOH A 52 56 56 HOH HOH . 
E 4 HOH A 53 57 57 HOH HOH . 
E 4 HOH A 54 58 58 HOH HOH . 
E 4 HOH A 55 59 59 HOH HOH . 
E 4 HOH A 56 1185 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 TZ1 . . . B 2 6.713 15.581 22.295 1 11.03 ? C1 TZ1 1 A 1 
HETATM 2 N N1 TZ1 . . . B 2 8.4 14.177 21.44 1 15.1 ? N1 TZ1 1 A 1 
HETATM 3 O O1 TZ1 . . . B 2 7.252 4.838 22.47 1 19.62 ? O1 TZ1 1 A 1 
HETATM 4 S S1 TZ1 . . . B 2 5.822 10.579 21.959 1 11.88 ? S1 TZ1 1 A 1 
HETATM 5 CL CL1 TZ1 . . . B 2 4.848 17.33 23.213 1 16.3 ? CL1 TZ1 1 A 1 
HETATM 6 C C2 TZ1 . . . B 2 7.162 14.314 21.955 1 11.3 ? C2 TZ1 1 A 1 
HETATM 7 N N2 TZ1 . . . B 2 7.466 7.847 19.599 1 10.22 ? N2 TZ1 1 A 1 
HETATM 8 S S2 TZ1 . . . B 2 6.732 7.654 22.08 1 15.97 ? S2 TZ1 1 A 1 
HETATM 9 C C3 TZ1 . . . B 2 6.33 13.201 22.123 1 14.13 ? C3 TZ1 1 A 1 
HETATM 10 N N3 TZ1 . . . B 2 6.934 9.114 19.945 1 10.71 ? N3 TZ1 1 A 1 
HETATM 11 S S3 TZ1 . . . B 2 8.161 2.142 21.983 1 17.08 ? S3 TZ1 1 A 1 
HETATM 12 C C4 TZ1 . . . B 2 5.041 13.336 22.641 1 11.99 ? C4 TZ1 1 A 1 
HETATM 13 N N4 TZ1 . . . B 2 7.884 5.722 20.5 1 11.77 ? N4 TZ1 1 A 1 
HETATM 14 C C5 TZ1 . . . B 2 4.582 14.602 22.985 1 12.41 ? C5 TZ1 1 A 1 
HETATM 15 C C6 TZ1 . . . B 2 5.423 15.706 22.793 1 14.7 ? C6 TZ1 1 A 1 
HETATM 16 C C7 TZ1 . . . B 2 8.884 12.975 21.092 1 14.9 ? C7 TZ1 1 A 1 
HETATM 17 C C8 TZ1 . . . B 2 8.097 11.833 21.238 1 14.95 ? C8 TZ1 1 A 1 
HETATM 18 C C9 TZ1 . . . B 2 6.807 11.943 21.762 1 16 ? C9 TZ1 1 A 1 
HETATM 19 C C10 TZ1 . . . B 2 6.521 9.149 21.241 1 11.29 ? C10 TZ1 1 A 1 
HETATM 20 C C11 TZ1 . . . B 2 7.407 6.984 20.643 1 11.32 ? C11 TZ1 1 A 1 
HETATM 21 C C12 TZ1 . . . B 2 7.795 4.738 21.387 1 13.96 ? C12 TZ1 1 A 1 
HETATM 22 C C13 TZ1 . . . B 2 8.391 3.465 21.015 1 10.88 ? C13 TZ1 1 A 1 
HETATM 23 C C14 TZ1 . . . B 2 9.099 3.251 19.972 1 7.64 ? C14 TZ1 1 A 1 
HETATM 24 C C15 TZ1 . . . B 2 9.423 2.004 19.904 1 10.35 ? C15 TZ1 1 A 1 
HETATM 25 C C16 TZ1 . . . B 2 9.081 1.22 20.948 1 9.89 ? C16 TZ1 1 A 1 
#
_model_server_stats.io_time_ms              44 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           25 
#