data_3O0R # _model_server_result.job_id xRLUmm5PQLcGAZro468tKA _model_server_result.datetime_utc '2024-11-26 20:15:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o0r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":805}' # _entry.id 3O0R # _exptl.entry_id 3O0R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 15.999 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OXYGEN ATOM' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O0R _cell.length_a 90.47 _cell.length_b 104.52 _cell.length_c 195.36 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O0R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? disulf ? disulf2 A SG CYS 134 L CYS 134 1_555 A SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? disulf ? disulf4 B SG CYS 151 H CYS 151 1_555 B SG CYS 206 H CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? covale ? covale1 D SG CYS 61 C CYS 61 1_555 J CAB HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.844 ? covale ? covale2 D SG CYS 64 C CYS 64 1_555 J CAC HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc1 C NE2 HIS 60 B HIS 60 1_555 E FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc2 C OE1 GLU 135 B GLU 135 1_555 I CA CA . C CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc3 C OE2 GLU 135 B GLU 135 1_555 I CA CA . C CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.753 ? metalc ? metalc4 C ND1 HIS 207 B HIS 207 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc5 C OE2 GLU 211 B GLU 211 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc6 C OE1 GLU 211 B GLU 211 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc7 C NE2 HIS 258 B HIS 258 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc8 C NE2 HIS 259 B HIS 259 1_555 G FE FE . B FE 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc9 C NE2 HIS 347 B HIS 347 1_555 F FE HEM . B HEM 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc10 C NE2 HIS 349 B HIS 349 1_555 E FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc11 E O2D HEM . B HEM 801 1_555 I CA CA . C CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc12 F FE HEM . B HEM 802 1_555 H O O . B O 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.846 ? metalc ? metalc13 F O2A HEM . B HEM 802 1_555 I CA CA . C CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc14 G FE FE . B FE 803 1_555 H O O . B O 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc15 M O HOH . B HOH 906 1_555 I CA CA . C CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc16 D NE2 HIS 65 C HIS 65 1_555 J FE HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc17 D O GLY 71 C GLY 71 1_555 I CA CA . C CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc18 D OH TYR 73 C TYR 73 1_555 I CA CA . C CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc19 D SD MET 112 C MET 112 1_555 J FE HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? # _chem_comp.formula O _chem_comp.formula_weight 15.999 _chem_comp.id O _chem_comp.mon_nstd_flag . _chem_comp.name 'OXYGEN ATOM' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3O0R _atom_sites.fract_transf_matrix[1][1] 0.011053 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009568 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005119 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 HEM B 1 801 801 HEM HEM . F 5 HEM B 1 802 802 HEM HEM . G 6 FE B 1 803 803 FE FE . H 7 O B 1 805 805 O O . I 8 CA C 1 804 804 CA CA . J 9 HEC C 1 201 201 HEC HEC . K 10 HOH L 1 301 301 HOH HOH . K 10 HOH L 2 302 302 HOH HOH . K 10 HOH L 3 303 303 HOH HOH . K 10 HOH L 4 304 304 HOH HOH . K 10 HOH L 5 305 305 HOH HOH . K 10 HOH L 6 306 306 HOH HOH . K 10 HOH L 7 307 307 HOH HOH . K 10 HOH L 8 308 308 HOH HOH . K 10 HOH L 9 309 309 HOH HOH . K 10 HOH L 10 310 310 HOH HOH . K 10 HOH L 11 311 311 HOH HOH . K 10 HOH L 12 312 312 HOH HOH . K 10 HOH L 13 313 313 HOH HOH . K 10 HOH L 14 314 314 HOH HOH . K 10 HOH L 15 315 315 HOH HOH . K 10 HOH L 16 316 316 HOH HOH . K 10 HOH L 17 317 317 HOH HOH . K 10 HOH L 18 318 318 HOH HOH . K 10 HOH L 19 319 319 HOH HOH . K 10 HOH L 20 320 320 HOH HOH . K 10 HOH L 21 321 321 HOH HOH . K 10 HOH L 22 322 322 HOH HOH . K 10 HOH L 23 323 323 HOH HOH . K 10 HOH L 24 324 324 HOH HOH . K 10 HOH L 25 325 325 HOH HOH . K 10 HOH L 26 326 326 HOH HOH . K 10 HOH L 27 327 327 HOH HOH . K 10 HOH L 28 328 328 HOH HOH . K 10 HOH L 29 329 329 HOH HOH . K 10 HOH L 30 330 330 HOH HOH . K 10 HOH L 31 331 331 HOH HOH . K 10 HOH L 32 332 332 HOH HOH . K 10 HOH L 33 333 333 HOH HOH . K 10 HOH L 34 334 334 HOH HOH . K 10 HOH L 35 335 335 HOH HOH . K 10 HOH L 36 336 336 HOH HOH . K 10 HOH L 37 337 337 HOH HOH . K 10 HOH L 38 338 338 HOH HOH . K 10 HOH L 39 339 339 HOH HOH . K 10 HOH L 40 340 340 HOH HOH . K 10 HOH L 41 341 341 HOH HOH . K 10 HOH L 42 342 342 HOH HOH . K 10 HOH L 43 345 345 HOH HOH . K 10 HOH L 44 346 346 HOH HOH . L 10 HOH H 1 301 301 HOH HOH . L 10 HOH H 2 302 302 HOH HOH . L 10 HOH H 3 303 303 HOH HOH . L 10 HOH H 4 304 304 HOH HOH . L 10 HOH H 5 305 305 HOH HOH . L 10 HOH H 6 306 306 HOH HOH . L 10 HOH H 7 308 308 HOH HOH . L 10 HOH H 8 309 309 HOH HOH . L 10 HOH H 9 310 310 HOH HOH . L 10 HOH H 10 311 311 HOH HOH . L 10 HOH H 11 312 312 HOH HOH . L 10 HOH H 12 313 313 HOH HOH . L 10 HOH H 13 314 314 HOH HOH . L 10 HOH H 14 315 315 HOH HOH . L 10 HOH H 15 316 316 HOH HOH . L 10 HOH H 16 317 317 HOH HOH . L 10 HOH H 17 318 318 HOH HOH . L 10 HOH H 18 319 319 HOH HOH . L 10 HOH H 19 320 320 HOH HOH . L 10 HOH H 20 321 321 HOH HOH . L 10 HOH H 21 322 322 HOH HOH . L 10 HOH H 22 323 323 HOH HOH . L 10 HOH H 23 324 324 HOH HOH . L 10 HOH H 24 325 325 HOH HOH . L 10 HOH H 25 326 326 HOH HOH . L 10 HOH H 26 328 328 HOH HOH . L 10 HOH H 27 329 329 HOH HOH . L 10 HOH H 28 330 330 HOH HOH . L 10 HOH H 29 331 331 HOH HOH . L 10 HOH H 30 332 332 HOH HOH . L 10 HOH H 31 333 333 HOH HOH . L 10 HOH H 32 334 334 HOH HOH . L 10 HOH H 33 335 335 HOH HOH . L 10 HOH H 34 336 336 HOH HOH . L 10 HOH H 35 337 337 HOH HOH . L 10 HOH H 36 338 338 HOH HOH . L 10 HOH H 37 339 339 HOH HOH . L 10 HOH H 38 340 340 HOH HOH . L 10 HOH H 39 341 341 HOH HOH . L 10 HOH H 40 342 342 HOH HOH . L 10 HOH H 41 344 344 HOH HOH . L 10 HOH H 42 347 347 HOH HOH . L 10 HOH H 43 348 348 HOH HOH . L 10 HOH H 44 349 349 HOH HOH . L 10 HOH H 45 350 350 HOH HOH . L 10 HOH H 46 351 351 HOH HOH . M 10 HOH B 1 466 307 HOH HOH . M 10 HOH B 2 467 308 HOH HOH . M 10 HOH B 3 468 316 HOH HOH . M 10 HOH B 4 469 322 HOH HOH . M 10 HOH B 5 901 901 HOH HOH . M 10 HOH B 6 902 902 HOH HOH . M 10 HOH B 7 903 903 HOH HOH . M 10 HOH B 8 904 904 HOH HOH . M 10 HOH B 9 905 905 HOH HOH . M 10 HOH B 10 906 906 HOH HOH . M 10 HOH B 11 907 907 HOH HOH . M 10 HOH B 12 908 908 HOH HOH . M 10 HOH B 13 909 909 HOH HOH . M 10 HOH B 14 910 910 HOH HOH . M 10 HOH B 15 911 911 HOH HOH . M 10 HOH B 16 912 912 HOH HOH . M 10 HOH B 17 913 913 HOH HOH . M 10 HOH B 18 914 914 HOH HOH . M 10 HOH B 19 915 915 HOH HOH . M 10 HOH B 20 916 916 HOH HOH . M 10 HOH B 21 917 917 HOH HOH . M 10 HOH B 22 918 918 HOH HOH . M 10 HOH B 23 919 919 HOH HOH . M 10 HOH B 24 920 920 HOH HOH . M 10 HOH B 25 922 922 HOH HOH . M 10 HOH B 26 923 923 HOH HOH . M 10 HOH B 27 924 924 HOH HOH . M 10 HOH B 28 925 925 HOH HOH . M 10 HOH B 29 926 926 HOH HOH . M 10 HOH B 30 927 927 HOH HOH . M 10 HOH B 31 928 928 HOH HOH . M 10 HOH B 32 929 929 HOH HOH . M 10 HOH B 33 930 930 HOH HOH . M 10 HOH B 34 931 931 HOH HOH . M 10 HOH B 35 932 932 HOH HOH . M 10 HOH B 36 933 933 HOH HOH . M 10 HOH B 37 934 934 HOH HOH . M 10 HOH B 38 935 935 HOH HOH . N 10 HOH C 1 301 301 HOH HOH . N 10 HOH C 2 302 302 HOH HOH . N 10 HOH C 3 303 303 HOH HOH . N 10 HOH C 4 304 304 HOH HOH . N 10 HOH C 5 305 305 HOH HOH . N 10 HOH C 6 306 306 HOH HOH . N 10 HOH C 7 307 307 HOH HOH . N 10 HOH C 8 309 309 HOH HOH . N 10 HOH C 9 310 310 HOH HOH . N 10 HOH C 10 311 311 HOH HOH . N 10 HOH C 11 312 312 HOH HOH . N 10 HOH C 12 313 313 HOH HOH . N 10 HOH C 13 314 314 HOH HOH . N 10 HOH C 14 315 315 HOH HOH . N 10 HOH C 15 317 317 HOH HOH . N 10 HOH C 16 318 318 HOH HOH . N 10 HOH C 17 319 319 HOH HOH . N 10 HOH C 18 320 320 HOH HOH . N 10 HOH C 19 321 321 HOH HOH . N 10 HOH C 20 323 323 HOH HOH . N 10 HOH C 21 324 324 HOH HOH . N 10 HOH C 22 325 325 HOH HOH . N 10 HOH C 23 326 326 HOH HOH . N 10 HOH C 24 327 327 HOH HOH . N 10 HOH C 25 328 328 HOH HOH . N 10 HOH C 26 329 329 HOH HOH . N 10 HOH C 27 330 330 HOH HOH . N 10 HOH C 28 331 331 HOH HOH . N 10 HOH C 29 332 332 HOH HOH . N 10 HOH C 30 333 333 HOH HOH . N 10 HOH C 31 334 334 HOH HOH . N 10 HOH C 32 335 335 HOH HOH . N 10 HOH C 33 336 336 HOH HOH . N 10 HOH C 34 337 337 HOH HOH . N 10 HOH C 35 338 338 HOH HOH . N 10 HOH C 36 339 339 HOH HOH . N 10 HOH C 37 340 340 HOH HOH . N 10 HOH C 38 341 341 HOH HOH . N 10 HOH C 39 342 342 HOH HOH . N 10 HOH C 40 343 343 HOH HOH . N 10 HOH C 41 344 344 HOH HOH . N 10 HOH C 42 345 345 HOH HOH . N 10 HOH C 43 346 346 HOH HOH . N 10 HOH C 44 921 921 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol O _atom_site.label_atom_id O _atom_site.label_comp_id O _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 7 _atom_site.Cartn_x 18.881 _atom_site.Cartn_y 16.84 _atom_site.Cartn_z 38.618 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 60.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id O _atom_site.auth_comp_id O _atom_site.auth_seq_id 805 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #