data_3O0T # _model_server_result.job_id uIbuGEAz0p0oQe2T0KH2XQ _model_server_result.datetime_utc '2024-10-11 02:24:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o0t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":10}' # _entry.id 3O0T # _exptl.entry_id 3O0T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O0T _cell.length_a 70.96 _cell.length_b 73.09 _cell.length_c 81.29 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O0T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 1 1 B,K,L,M,N,O,P,Q,S 2 1 A,C,D,E,F,G,H,I,J,R 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y+1/2,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 36.545 -40.645 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3O0T _atom_sites.fract_transf_matrix[1][1] 0.014092 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013682 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012302 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 1 1 PO4 PO4 . D 3 EDO A 1 290 1 EDO EDO . E 3 EDO A 1 4 4 EDO EDO . F 3 EDO A 1 5 5 EDO EDO . G 3 EDO A 1 7 7 EDO EDO . H 3 EDO A 1 8 8 EDO EDO . I 3 EDO A 1 9 9 EDO EDO . J 3 EDO A 1 11 11 EDO EDO . K 2 PO4 B 1 2 2 PO4 PO4 . L 2 PO4 B 1 3 3 PO4 PO4 . M 2 PO4 B 1 4 4 PO4 PO4 . N 3 EDO B 1 290 2 EDO EDO . O 3 EDO B 1 291 3 EDO EDO . P 3 EDO B 1 6 6 EDO EDO . Q 3 EDO B 1 10 10 EDO EDO . R 4 HOH A 1 3 3 HOH HOH . R 4 HOH A 2 6 6 HOH HOH . R 4 HOH A 3 13 13 HOH HOH . R 4 HOH A 4 14 14 HOH HOH . R 4 HOH A 5 15 15 HOH HOH . R 4 HOH A 6 16 16 HOH HOH . R 4 HOH A 7 17 17 HOH HOH . R 4 HOH A 8 19 19 HOH HOH . R 4 HOH A 9 20 20 HOH HOH . R 4 HOH A 10 21 21 HOH HOH . R 4 HOH A 11 22 22 HOH HOH . R 4 HOH A 12 24 24 HOH HOH . R 4 HOH A 13 26 26 HOH HOH . R 4 HOH A 14 27 27 HOH HOH . R 4 HOH A 15 28 28 HOH HOH . R 4 HOH A 16 29 29 HOH HOH . R 4 HOH A 17 30 30 HOH HOH . R 4 HOH A 18 34 34 HOH HOH . R 4 HOH A 19 37 37 HOH HOH . R 4 HOH A 20 38 38 HOH HOH . R 4 HOH A 21 40 40 HOH HOH . R 4 HOH A 22 41 41 HOH HOH . R 4 HOH A 23 45 45 HOH HOH . R 4 HOH A 24 46 46 HOH HOH . R 4 HOH A 25 47 47 HOH HOH . R 4 HOH A 26 48 48 HOH HOH . R 4 HOH A 27 49 49 HOH HOH . R 4 HOH A 28 50 50 HOH HOH . R 4 HOH A 29 51 51 HOH HOH . R 4 HOH A 30 53 53 HOH HOH . R 4 HOH A 31 54 54 HOH HOH . R 4 HOH A 32 55 55 HOH HOH . R 4 HOH A 33 56 56 HOH HOH . R 4 HOH A 34 57 57 HOH HOH . R 4 HOH A 35 58 58 HOH HOH . R 4 HOH A 36 61 61 HOH HOH . R 4 HOH A 37 63 63 HOH HOH . R 4 HOH A 38 65 65 HOH HOH . R 4 HOH A 39 68 68 HOH HOH . R 4 HOH A 40 69 69 HOH HOH . R 4 HOH A 41 72 72 HOH HOH . R 4 HOH A 42 73 73 HOH HOH . R 4 HOH A 43 74 74 HOH HOH . R 4 HOH A 44 75 75 HOH HOH . R 4 HOH A 45 82 82 HOH HOH . R 4 HOH A 46 84 84 HOH HOH . R 4 HOH A 47 85 85 HOH HOH . R 4 HOH A 48 86 86 HOH HOH . R 4 HOH A 49 291 1 HOH HOH . R 4 HOH A 50 292 4 HOH HOH . R 4 HOH A 51 293 11 HOH HOH . R 4 HOH A 52 294 90 HOH HOH . R 4 HOH A 53 295 92 HOH HOH . R 4 HOH A 54 296 93 HOH HOH . R 4 HOH A 55 297 94 HOH HOH . R 4 HOH A 56 298 96 HOH HOH . R 4 HOH A 57 299 97 HOH HOH . R 4 HOH A 58 300 98 HOH HOH . R 4 HOH A 59 301 104 HOH HOH . R 4 HOH A 60 302 105 HOH HOH . R 4 HOH A 61 303 107 HOH HOH . R 4 HOH A 62 304 108 HOH HOH . R 4 HOH A 63 305 109 HOH HOH . R 4 HOH A 64 306 110 HOH HOH . R 4 HOH A 65 307 111 HOH HOH . R 4 HOH A 66 308 116 HOH HOH . R 4 HOH A 67 309 121 HOH HOH . R 4 HOH A 68 310 122 HOH HOH . R 4 HOH A 69 311 123 HOH HOH . R 4 HOH A 70 312 125 HOH HOH . R 4 HOH A 71 313 126 HOH HOH . R 4 HOH A 72 314 130 HOH HOH . R 4 HOH A 73 315 136 HOH HOH . R 4 HOH A 74 316 137 HOH HOH . R 4 HOH A 75 317 138 HOH HOH . R 4 HOH A 76 318 139 HOH HOH . R 4 HOH A 77 319 149 HOH HOH . R 4 HOH A 78 320 154 HOH HOH . R 4 HOH A 79 321 155 HOH HOH . R 4 HOH A 80 322 156 HOH HOH . R 4 HOH A 81 323 157 HOH HOH . R 4 HOH A 82 324 161 HOH HOH . R 4 HOH A 83 325 162 HOH HOH . R 4 HOH A 84 326 163 HOH HOH . R 4 HOH A 85 327 164 HOH HOH . R 4 HOH A 86 328 165 HOH HOH . R 4 HOH A 87 329 169 HOH HOH . R 4 HOH A 88 330 172 HOH HOH . R 4 HOH A 89 331 173 HOH HOH . R 4 HOH A 90 332 174 HOH HOH . R 4 HOH A 91 333 175 HOH HOH . R 4 HOH A 92 334 182 HOH HOH . R 4 HOH A 93 335 183 HOH HOH . R 4 HOH A 94 336 184 HOH HOH . R 4 HOH A 95 337 185 HOH HOH . R 4 HOH A 96 338 201 HOH HOH . R 4 HOH A 97 339 202 HOH HOH . R 4 HOH A 98 340 203 HOH HOH . R 4 HOH A 99 341 211 HOH HOH . R 4 HOH A 100 342 212 HOH HOH . R 4 HOH A 101 343 213 HOH HOH . R 4 HOH A 102 344 214 HOH HOH . R 4 HOH A 103 345 215 HOH HOH . R 4 HOH A 104 346 216 HOH HOH . R 4 HOH A 105 347 217 HOH HOH . R 4 HOH A 106 348 218 HOH HOH . R 4 HOH A 107 349 222 HOH HOH . R 4 HOH A 108 350 223 HOH HOH . R 4 HOH A 109 351 226 HOH HOH . R 4 HOH A 110 352 227 HOH HOH . R 4 HOH A 111 353 228 HOH HOH . R 4 HOH A 112 354 229 HOH HOH . R 4 HOH A 113 355 230 HOH HOH . S 4 HOH B 1 8 8 HOH HOH . S 4 HOH B 2 18 18 HOH HOH . S 4 HOH B 3 23 23 HOH HOH . S 4 HOH B 4 31 31 HOH HOH . S 4 HOH B 5 32 32 HOH HOH . S 4 HOH B 6 33 33 HOH HOH . S 4 HOH B 7 36 36 HOH HOH . S 4 HOH B 8 39 39 HOH HOH . S 4 HOH B 9 42 42 HOH HOH . S 4 HOH B 10 43 43 HOH HOH . S 4 HOH B 11 44 44 HOH HOH . S 4 HOH B 12 52 52 HOH HOH . S 4 HOH B 13 60 60 HOH HOH . S 4 HOH B 14 62 62 HOH HOH . S 4 HOH B 15 67 67 HOH HOH . S 4 HOH B 16 70 70 HOH HOH . S 4 HOH B 17 76 76 HOH HOH . S 4 HOH B 18 77 77 HOH HOH . S 4 HOH B 19 78 78 HOH HOH . S 4 HOH B 20 79 79 HOH HOH . S 4 HOH B 21 80 80 HOH HOH . S 4 HOH B 22 81 81 HOH HOH . S 4 HOH B 23 83 83 HOH HOH . S 4 HOH B 24 88 88 HOH HOH . S 4 HOH B 25 292 10 HOH HOH . S 4 HOH B 26 293 95 HOH HOH . S 4 HOH B 27 294 99 HOH HOH . S 4 HOH B 28 295 100 HOH HOH . S 4 HOH B 29 296 101 HOH HOH . S 4 HOH B 30 297 106 HOH HOH . S 4 HOH B 31 298 112 HOH HOH . S 4 HOH B 32 299 118 HOH HOH . S 4 HOH B 33 300 127 HOH HOH . S 4 HOH B 34 301 129 HOH HOH . S 4 HOH B 35 302 133 HOH HOH . S 4 HOH B 36 303 134 HOH HOH . S 4 HOH B 37 304 141 HOH HOH . S 4 HOH B 38 305 145 HOH HOH . S 4 HOH B 39 306 147 HOH HOH . S 4 HOH B 40 307 148 HOH HOH . S 4 HOH B 41 308 151 HOH HOH . S 4 HOH B 42 309 153 HOH HOH . S 4 HOH B 43 310 159 HOH HOH . S 4 HOH B 44 311 166 HOH HOH . S 4 HOH B 45 312 167 HOH HOH . S 4 HOH B 46 313 168 HOH HOH . S 4 HOH B 47 314 171 HOH HOH . S 4 HOH B 48 315 176 HOH HOH . S 4 HOH B 49 316 177 HOH HOH . S 4 HOH B 50 317 178 HOH HOH . S 4 HOH B 51 318 179 HOH HOH . S 4 HOH B 52 319 180 HOH HOH . S 4 HOH B 53 320 181 HOH HOH . S 4 HOH B 54 321 204 HOH HOH . S 4 HOH B 55 322 205 HOH HOH . S 4 HOH B 56 323 206 HOH HOH . S 4 HOH B 57 324 207 HOH HOH . S 4 HOH B 58 325 208 HOH HOH . S 4 HOH B 59 326 209 HOH HOH . S 4 HOH B 60 327 210 HOH HOH . S 4 HOH B 61 328 219 HOH HOH . S 4 HOH B 62 329 220 HOH HOH . S 4 HOH B 63 330 221 HOH HOH . S 4 HOH B 64 331 224 HOH HOH . S 4 HOH B 65 332 225 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . Q 3 28.944 34.227 -25.183 1 74.09 ? C1 EDO 10 B 1 HETATM 2 O O1 EDO . . . Q 3 28.453 33.997 -26.513 1 68.17 ? O1 EDO 10 B 1 HETATM 3 C C2 EDO . . . Q 3 30.067 33.263 -24.795 1 65.27 ? C2 EDO 10 B 1 HETATM 4 O O2 EDO . . . Q 3 29.554 31.965 -24.432 1 83.47 ? O2 EDO 10 B 1 # _model_server_stats.io_time_ms 166 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #